prot_H-elongata_contig74899.15168.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74899.15168.1
Unique Nameprot_H-elongata_contig74899.15168.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
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BLAST of mRNA_H-elongata_contig74899.15168.1 vs. uniprot
Match: D7G1Y2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y2_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 1.960e-8
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:    1 MVISQGFNDHCHPPTLRALASLLDPSVGIVAPSSARTAIEAIFRRLASHVPAS 53
            +VISQGF+DHCHPPT++ L+ LL PSV +VAP SA+  +E        H PAS
Sbjct:   87 LVISQGFDDHCHPPTIKGLSGLLKPSVRLVAPPSAKAVLE-------EHFPAS 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74899.15168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Y2_ECTSI1.960e-854.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74899contigH-elongata_contig74899:151..1342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74899.15168.1mRNA_H-elongata_contig74899.15168.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74899 147..1399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74899.15168.1 ID=prot_H-elongata_contig74899.15168.1|Name=mRNA_H-elongata_contig74899.15168.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MVISQGFNDHCHPPTLRALASLLDPSVGIVAPSSARTAIEAIFRRLASHV
PASGRDNGPFQGWSRGRGTGDDRGRPGASMAAGREWLHRSPHDR*
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