prot_H-elongata_contig74622.15143.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74622.15143.1 vs. uniprot
Match: D7FM18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM18_ECTSI) HSP 1 Score: 175 bits (444), Expect = 2.300e-47 Identity = 145/354 (40.96%), Postives = 170/354 (48.02%), Query Frame = 0
Query: 12 GSCGSGCSRGFSPLRSRSQGH-LHQAGSGGAGIPYSYCGGGHGGDHLNQPMVCVVVPAQRAAALGLSHLPQHAM---GPCTSRGSPPRDVHFPTLAHSTSAGSAHGXXXXX----YPSHTRSHSYSIPPTSHG------------HNSGGAGGGYSHHA---SQGADQHLAVGPQHHIALKT------------------------SHSYNVPPPMHMSPVYRERRERSESRGYQVPLNSGSSSATGGAIVGGHPLTEYERSKYDMSVPSTSYPPPGWSGDGAGIRGMG----------HETIRSQSPPTAVRSAHGTRNGGGAPRPVQTQSRGYDKQYPPSRYSPASGPVDSF 308
G+CG GCS GFSP+RSR GH +H +GG G+PY Y GG HG +H NQPMVCVVVPAQRAAALGL+ P H + G CTSRG+ P D HF +LA S+ XXXXX Y SHTRSHS P SHG H+ G G + H + G HL+V P SY PP MHM P+ RER+ R+E R Y P + EYERS S ++Y P W D AG G G H +RSQSPP VRS RNGGGAPRP R YD Y +RY+ G V+ F
Sbjct: 23 GACGVGCSNGFSPMRSRGAGHSIHGPSAGGGGVPYGYGGGRHG-EHHNQPMVCVVVPAQRAAALGLAPHPPHGLHSTGKCTSRGTAPCDGHFSSLAQSSXXXXXXXXXXXXXHPGYASHTRSHSQ---PISHGXXXXXXXXXXYGHHGGSPHGNFDHXXXXXAAGTPHHLSVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSYGGPPAMHMPPMPRERQGRAEPRDY--PSGASGXXXXXXXXXXSPSFGEYERSSQSESHLHSAYALPEWGYDDAGGSGAGRAGGGAMATAHGVVRSQSPPPMVRS----RNGGGAPRPPSASPRAYDGHYSSTRYNGRGG-VEGF 365
BLAST of mRNA_H-elongata_contig74622.15143.1 vs. uniprot
Match: A0A6H5JCH7_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH7_9PHAE) HSP 1 Score: 160 bits (405), Expect = 5.020e-40 Identity = 135/346 (39.02%), Postives = 160/346 (46.24%), Query Frame = 0
Query: 12 GSCGSGCSRGFSPLRSRSQGH-LHQAGSGGAGIPYSYCGGGHGGDHLNQPMVCVVVPAQRAAALGLSHLPQHAM---GPCTSRGSPPRDVHFPTLAHSTSAGSAHGXXXXXYPSHTRSHSYSIPPTSHGHNSGGAGGGYS--------HHASQGADQHLAVGPQHHIALKTS--------------------------------HSYNVPPPMHMSPVYRERRERSESRGYQVPLNSGSSSATGGAIVGGHPLTEYERSKYDMSVPSTSYPPPGWSGDGAGIRGMGHET----------IRSQSPPTAVRSAHGTRNGGGAPRPVQTQSRGYDKQYPPSRYSPASG 303
G+CG GCS GFSP+RSR GH +H +GG G+PY + GG HG +H NQPMVCVVVPAQRAAALG + P H G CTSRG+ P D HF +LA S +A XX Y SHTRS+S P SHG H A G HH+ + S SY PP MHM P+ RER+ R+E R Y G+S ++G + G EYERS S + + P W D AG G G RSQSPP VRS R GGGAPRP R YD Y +RY+ G
Sbjct: 386 GACGVGCSHGFSPMRSRGAGHSMHGPSAGGGGVPYGFGGGRHG-EHHNQPMVCVVVPAQRAAALGFAPHPPHGFHSTGKCTSRGTAPCDGHFSSLAQSNAASXXXXXXHPGYASHTRSNSQ---PMSHGXXXXXXXXXXXXXXXXXXXHXXFXXXXXGAASGTPHHLLVNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGAPPAMHMPPMPRERQGRAEPRDYPA----GASGSSGSSPSFG----EYERSSQSESHLHSPHALPEWGYDDAGGSGAGRAVGGSMATALGVTRSQSPPPMVRS----RIGGGAPRPPSASPRAYDGHYSSTRYNGRGG 715 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74622.15143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig74622.15143.1 ID=prot_H-elongata_contig74622.15143.1|Name=mRNA_H-elongata_contig74622.15143.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bpback to top |