prot_H-elongata_contig74538.15136.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74538.15136.1
Unique Nameprot_H-elongata_contig74538.15136.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
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BLAST of mRNA_H-elongata_contig74538.15136.1 vs. uniprot
Match: D8LJP0_ECTSI (Sart3 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP0_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.260e-17
Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 0 
Query:    2 LTARAVRNLPWSPELWCRRLRSLERSAD---GSSDRGDDRAKVEAVRAVWRKALTCGLPSPDDYVKV 65
            LTARAVRNLPWS ELWCRRLRSLERS++   G S  G   A+  A+R VW++AL   LPSPD+YVK+
Sbjct:  318 LTARAVRNLPWSAELWCRRLRSLERSSEEAGGPSGEGTAGAEA-AMRRVWKEALGSSLPSPDEYVKI 383
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BLAST of mRNA_H-elongata_contig74538.15136.1 vs. uniprot
Match: A0A158R732_TAEAS (Uncharacterized protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A158R732_TAEAS)

HSP 1 Score: 52.8 bits (125), Expect = 2.280e-6
Identity = 30/81 (37.04%), Postives = 39/81 (48.15%), Query Frame = 0 
Query:    1 TLTARAVRNLPWSPELWCR-----RLRSLERSADGSSDRGDDRAKVEA-----------VRAVWRKALTCGLPSPDDYVKV 65
            T  ARAVRN+ WS ELWCR       R+ + +   +S  G D A VE            V+ ++  AL CG PS  D + V
Sbjct:  344 TTLARAVRNISWSSELWCRYALACEARAWDLATAANSSCGTDEASVEQLASHLSEEFDPVKDIYENALKCGFPSASDLIAV 424
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74538.15136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJP0_ECTSI1.260e-1764.18Sart3 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A158R732_TAEAS2.280e-637.04Uncharacterized protein n=1 Tax=Taenia asiatica Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74538contigH-elongata_contig74538:794..991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74538.15136.1mRNA_H-elongata_contig74538.15136.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74538 794..991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74538.15136.1 ID=prot_H-elongata_contig74538.15136.1|Name=mRNA_H-elongata_contig74538.15136.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
TLTARAVRNLPWSPELWCRRLRSLERSADGSSDRGDDRAKVEAVRAVWRK
ALTCGLPSPDDYVKV*
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