prot_H-elongata_contig72291.14902.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72291.14902.1
Unique Nameprot_H-elongata_contig72291.14902.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A2D4PWC3_MICSU (Uncharacterized protein (Fragment) n=1 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4PWC3_MICSU)

HSP 1 Score: 86.3 bits (212), Expect = 4.560e-20
Identity = 40/74 (54.05%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHLASRFVDE 74
            SFH SGNFL+++S D +LKI DL EGRL+YTL GH GPV + +FS DG  FASGG D  V+ W+++  S  +++
Sbjct:   22 SFHPSGNFLITASNDGTLKIMDLIEGRLIYTLHGHEGPVLSVSFSKDGETFASGGTDTQVLLWKTNFDSSVLEK 95          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A452S4D9_URSAM (POC1 centriolar protein A n=1 Tax=Ursus americanus TaxID=9643 RepID=A0A452S4D9_URSAM)

HSP 1 Score: 84.7 bits (208), Expect = 1.030e-18
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHL 67
            SFH SGN+LL++S+D++LKI DL EGRL+YTL GH GP    AFS  G  FASGG D  VM W+S+ 
Sbjct:   30 SFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNF 96          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A803VML2_FICAL (POC1 centriolar protein A n=1 Tax=Ficedula albicollis TaxID=59894 RepID=A0A803VML2_FICAL)

HSP 1 Score: 84.7 bits (208), Expect = 1.190e-18
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHL 67
            SFH SGN+L+++S+D++LKI DL EGRL+YTL GH GP    AFS DG  FASGG D  VM W+++ 
Sbjct:   21 SFHPSGNYLVTASSDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRDGDLFASGGSDEQVMVWKTNF 87          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A814R7C9_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A814R7C9_9BILA)

HSP 1 Score: 85.5 bits (210), Expect = 1.350e-18
Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    2 FHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHL 67
            FH +GNFLLS+S+DA+LK++DL EGRL+YTL GH GP  + AFS  G  FASGG+D  V+ W+++ 
Sbjct:   15 FHPNGNFLLSASSDATLKVFDLLEGRLIYTLHGHQGPAMSVAFSKQGDYFASGGQDQQVLVWKTNF 80          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A672SJB8_SINGR (POC1 centriolar protein B n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672SJB8_SINGR)

HSP 1 Score: 86.7 bits (213), Expect = 1.870e-18
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHL 67
            SFH SGN+++S S+D+++KI DL EGRL+YTL GH GPV A AFS DG  FASGG D  V+ W+++ 
Sbjct:  225 SFHPSGNYMISGSSDSTMKILDLLEGRLIYTLHGHKGPVLAVAFSRDGDLFASGGADSQVLMWKTNF 291          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: Q8BJN7_MOUSE (Uncharacterized protein n=1 Tax=Mus musculus TaxID=10090 RepID=Q8BJN7_MOUSE)

HSP 1 Score: 84.0 bits (206), Expect = 2.130e-18
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHL 67
            SFH SGN+L+++S+D++LKI DL EGRL+YTL GH GP    AFS  G  FASGG D  VM W+S+ 
Sbjct:   34 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNF 100          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A672SIZ9_SINGR (POC1 centriolar protein B n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672SIZ9_SINGR)

HSP 1 Score: 86.7 bits (213), Expect = 2.880e-18
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHL 67
            SFH SGN+++S S+D+++KI DL EGRL+YTL GH GPV A AFS DG  FASGG D  V+ W+++ 
Sbjct:  228 SFHPSGNYMISGSSDSTMKILDLLEGRLIYTLHGHKGPVLAVAFSRDGDLFASGGADSQVLMWKTNF 294          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A267FPY4_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FPY4_9PLAT)

HSP 1 Score: 84.3 bits (207), Expect = 3.050e-18
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    2 FHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHL 67
            FH SGNFLLS+  D++L+++DL EGRL+YTL+GH G V AC+FS  G  FASGG D  V  WR++ 
Sbjct:   20 FHPSGNFLLSAGDDSTLRLYDLLEGRLIYTLRGHDGAVTACSFSVCGANFASGGADQQVFLWRTNF 85          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: UPI000FCCE20F (POC1 centriolar protein homolog A n=1 Tax=Neopelma chrysocephalum TaxID=114329 RepID=UPI000FCCE20F)

HSP 1 Score: 82.8 bits (203), Expect = 4.380e-18
Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHLASRFVD 73
            SFH SGN+L+++S D++LKI DL EGRL+YTL GH GP    AFS  G  FASGG D  VM W+++  + + D
Sbjct:   19 SFHPSGNYLVTASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRSGDLFASGGSDEQVMVWKTNFDADYGD 91          
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Match: A0A8E0SB91_9TREM (POC1 centriolar protein A (Fragment) n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0SB91_9TREM)

HSP 1 Score: 84.0 bits (206), Expect = 4.430e-18
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    1 SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTRFASGGRDGLVMSWRSHLASRFVD 73
            S H +G+FLLS+S DA+LKI+DL EGR +YTL+GH+GPV A AFS  G  FASGG D  V  W+++  + F +
Sbjct:   10 SCHPNGHFLLSASEDATLKIFDLLEGRPLYTLQGHTGPVTAAAFSASGDHFASGGSDEQVFLWKTNFDAYFSE 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72291.14902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4PWC3_MICSU4.560e-2054.05Uncharacterized protein (Fragment) n=1 Tax=Micruru... [more]
A0A452S4D9_URSAM1.030e-1859.70POC1 centriolar protein A n=1 Tax=Ursus americanus... [more]
A0A803VML2_FICAL1.190e-1858.21POC1 centriolar protein A n=1 Tax=Ficedula albicol... [more]
A0A814R7C9_9BILA1.350e-1857.58Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A672SJB8_SINGR1.870e-1858.21POC1 centriolar protein B n=1 Tax=Sinocyclocheilus... [more]
Q8BJN7_MOUSE2.130e-1858.21Uncharacterized protein n=1 Tax=Mus musculus TaxID... [more]
A0A672SIZ9_SINGR2.880e-1858.21POC1 centriolar protein B n=1 Tax=Sinocyclocheilus... [more]
A0A267FPY4_9PLAT3.050e-1857.58Uncharacterized protein n=1 Tax=Macrostomum lignan... [more]
UPI000FCCE20F4.380e-1853.42POC1 centriolar protein homolog A n=1 Tax=Neopelma... [more]
A0A8E0SB91_9TREM4.430e-1854.79POC1 centriolar protein A (Fragment) n=1 Tax=Fasci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 25..64
e-value: 4.7E-10
score: 49.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 2..22
e-value: 0.0028
score: 18.4
coord: 26..63
e-value: 1.0E-8
score: 35.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 32..63
score: 13.249
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..31
score: 13.717
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..72
e-value: 4.6E-23
score: 83.5
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 1..67
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 1..67
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 9..23
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..73
score: 21.674
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72291contigH-elongata_contig72291:2658..3142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72291.14902.1mRNA_H-elongata_contig72291.14902.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72291 2658..3142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72291.14902.1 ID=prot_H-elongata_contig72291.14902.1|Name=mRNA_H-elongata_contig72291.14902.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
SFHKSGNFLLSSSADASLKIWDLREGRLMYTLKGHSGPVKACAFSPDGTR
FASGGRDGLVMSWRSHLASRFVDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf