prot_H-elongata_contig7228.14900.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7228.14900.1
Unique Nameprot_H-elongata_contig7228.14900.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
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BLAST of mRNA_H-elongata_contig7228.14900.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.350e-7
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   89 ADVAMAGGLLLTSEDYTAHVMELRDELEEAWSKDEKVAALKVTVQ 133
            A   MAGGLL+T E+Y AHV  L+++LE AW ++EKVAALKVTVQ
Sbjct:  386 AGKGMAGGLLVTPEEYVAHVSGLKEDLEVAWFREEKVAALKVTVQ 430
[Close]
BLAST of mRNA_H-elongata_contig7228.14900.1 vs. uniprot
Match: A0A6H5JPH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH3_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.000e-6
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:   94 AGGLLLTSEDYTAHVMELRDELEEAWSKDEKVAALKVTVQ 133
            AGGLL+T E+Y AHV  L+++LE AWS++EKVAALKVTV+
Sbjct:  384 AGGLLVTPEEYVAHVSGLKEDLEVAWSREEKVAALKVTVK 423
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7228.14900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLV5_ECTSI3.350e-764.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPH3_9PHAE1.000e-667.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7228contigH-elongata_contig7228:1097..1948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7228.14900.1mRNA_H-elongata_contig7228.14900.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7228 1096..1948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7228.14900.1 ID=prot_H-elongata_contig7228.14900.1|Name=mRNA_H-elongata_contig7228.14900.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
KRWEKHLEGILKRWGPGASISGPHRGSNSGADQAAGPSKSPTVSKPPRSK
SRYETRLEELESSLSGASSGSSGGGGTGGGSGSKAKNVADVAMAGGLLLT
SEDYTAHVMELRDELEEAWSKDEKVAALKVTVQ
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