prot_H-elongata_contig72172.14886.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72172.14886.1
Unique Nameprot_H-elongata_contig72172.14886.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: D8LKN7_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN7_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 3.880e-14
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 MPGDGVPPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
            +P  G  PRFE+FN+WGDFAGPD+  D+ S M+F++C  H + L+R R+  CPV  C
Sbjct:  227 LPASGDAPRFETFNLWGDFAGPDSVFDDESGMVFYACRGHYDDLLRMRDPYCPVAGC 283          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: A0A6H5JGR2_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.900e-14
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 MPGDGVPPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
            +P     PRFE+FN+WGDFAGPD+  D+ S M+F++C  H + L+R R+L CPV  C
Sbjct:  224 LPASRDAPRFETFNLWGDFAGPDSVFDDESGMVFYACRGHYDDLLRMRDLYCPVTGC 280          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: M4BGM0_HYAAE (R3H domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGM0_HYAAE)

HSP 1 Score: 60.5 bits (145), Expect = 2.950e-9
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0
Query:   10 FESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
            FESF +WGD AGPD+ LDE SE+IF +C +H + L   RE +C +  C
Sbjct:   31 FESFELWGDVAGPDSVLDEKSEIIFVACRAHYKELCSLREFQCRIKRC 78          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: A0A662XHC5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHC5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.300e-9
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    6 VPPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
             P  FESF +WGD AGP++ LDE SEMIF +C +H   L   RE +C +  C
Sbjct:  210 APRAFESFELWGDAAGPESVLDEPSEMIFVNCRAHYHALRSLREFKCRMKRC 261          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: A0A662Y532_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y532_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.570e-9
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    6 VPPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
             P  FESF +WGD AGP++ LDE SEMIF +C +H   L   RE +C +  C
Sbjct:  210 APRAFESFELWGDAAGPESVLDEPSEMIFVNCRAHYHALRSLREFKCRMKRC 261          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: A0A5D6XSG8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSG8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.410e-8
Identity = 27/48 (56.25%), Postives = 30/48 (62.50%), Query Frame = 0
Query:   10 FESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
            F+SF  WGD  GPDA LDE SEMIF  C +H E L   RE +C V  C
Sbjct:  211 FDSFPFWGDALGPDAVLDEPSEMIFVDCRAHYEALRALREFKCRVKKC 258          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: G4YVH3_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YVH3_PHYSP)

HSP 1 Score: 58.2 bits (139), Expect = 1.930e-8
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    6 VPPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
             P  FESF +WGD AGP++ LDE S+MIF  C +H   L   RE +C +  C
Sbjct:  153 APRPFESFELWGDAAGPESVLDEPSDMIFVDCRAHYSELRSLREFKCRMKRC 204          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: A0A3F2RJA0_9STRA (RING-type E3 ubiquitin transferase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJA0_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.750e-8
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    6 VPPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
             P  FESF +WGD AGP++ LDE SE+IF  C +H   L   RE +C +  C
Sbjct:   60 TPRTFESFELWGDAAGPESVLDELSEIIFVDCRAHYHALRSLREFKCRLKRC 111          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: A0A2P4XA62_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XA62_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.760e-8
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    7 PPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
            P  +ESF +WGD AGP++ LDE SEMIF  C +H   L   RE +C +  C
Sbjct:  138 PRPYESFELWGDAAGPESVLDEPSEMIFVDCRAHYYDLRSLREFKCRMKRC 188          
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Match: W2PIK0_PHYPN (RING-type E3 ubiquitin transferase n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PIK0_PHYPN)

HSP 1 Score: 56.2 bits (134), Expect = 9.210e-8
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:   10 FESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRARELRCPVGAC 57
            +ESF +WGD AGP++ LDE SEMIF  C +H   L   RE +C +  C
Sbjct:  174 YESFELWGDAAGPESVLDEPSEMIFVDCKAHYYELRSLREFKCRMKRC 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72172.14886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LKN7_ECTSI3.880e-1450.88RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5JGR2_9PHAE9.900e-1450.88RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
M4BGM0_HYAAE2.950e-952.08R3H domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A662XHC5_9STRA7.300e-950.00RING-type E3 ubiquitin transferase n=1 Tax=Nothoph... [more]
A0A662Y532_9STRA7.570e-950.00RING-type E3 ubiquitin transferase n=1 Tax=Nothoph... [more]
A0A5D6XSG8_9STRA1.410e-856.25RING-type E3 ubiquitin transferase n=1 Tax=Pythium... [more]
G4YVH3_PHYSP1.930e-848.08RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
A0A3F2RJA0_9STRA6.750e-848.08RING-type E3 ubiquitin transferase n=4 Tax=Phytoph... [more]
A0A2P4XA62_9STRA6.760e-849.02RING-type E3 ubiquitin transferase n=2 Tax=Phytoph... [more]
W2PIK0_PHYPN9.210e-850.00RING-type E3 ubiquitin transferase n=9 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72172contigH-elongata_contig72172:495..665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72172.14886.1mRNA_H-elongata_contig72172.14886.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72172 495..665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72172.14886.1 ID=prot_H-elongata_contig72172.14886.1|Name=mRNA_H-elongata_contig72172.14886.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MPGDGVPPRFESFNIWGDFAGPDAKLDEGSEMIFHSCASHLEHLVRAREL
RCPVGAC
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