prot_H-elongata_contig71996.14876.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71996.14876.1
Unique Nameprot_H-elongata_contig71996.14876.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A0A482UR88_9ARCH (FYVE-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UR88_9ARCH)

HSP 1 Score: 104 bits (259), Expect = 3.990e-27
Identity = 45/87 (51.72%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    5 TGGAPKWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHCHLCYRSPLLDW 91
             GG   W+ D  A  CM C  R            F+ +LRRHHCRRCG+V C  CAP+NN+RPILEW L  AVRHC  C++SPL+DW
Sbjct:   34 AGGGASWILDSDAPQCMRCSRR------------FSFLLRRHHCRRCGQVVCEACAPSNNSRPILEWGLREAVRHCRGCFKSPLIDW 108          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A9UQ85_MONBE (FYVE-type domain-containing protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UQ85_MONBE)

HSP 1 Score: 77.4 bits (189), Expect = 6.040e-17
Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    8 APKWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHC 80
            A  W PDD  K C LC ++            FT+V RRHHCRRCG++ C+ CAP NNT+PI E S+   VRHC
Sbjct:    4 AAPWTPDDHGK-CQLCANK------------FTMVRRRHHCRRCGKLVCSSCAPKNNTKPIPELSMLEPVRHC 63          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: D8LE09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE09_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.060e-15
Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    7 GAPKWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILE 70
            G P+WV D++ + CMLC              +FT++LRRHHCRRCGR++C FCAPT N+RPILE
Sbjct:  567 GPPRWVADEEQEACMLCDR------------VFTVILRRHHCRRCGRLSCKFCAPTENSRPILE 618          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A0A3P7GJ14_TOXCA (FYVE-type domain-containing protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A3P7GJ14_TOXCA)

HSP 1 Score: 60.5 bits (145), Expect = 9.750e-10
Identity = 30/75 (40.00%), Postives = 40/75 (53.33%), Query Frame = 0
Query:    9 PKWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHCHLC 83
            PKW   D    C  CG++            FT+ +R+HHCR CGR+ CA C+    T PIL++ L  AVR C +C
Sbjct:   55 PKWAEGDV---CSECGAK------------FTLTMRKHHCRHCGRLVCARCS--EQTMPILKYDLQKAVRVCQIC 112          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A0A0P1B090_PLAHL (Early endosome antigen 1-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B090_PLAHL)

HSP 1 Score: 61.6 bits (148), Expect = 4.540e-9
Identity = 31/87 (35.63%), Postives = 44/87 (50.57%), Query Frame = 0
Query:   10 KWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHCHLCYRS-----PLLDW 91
            +WV DD+   CMLC +            LFT++ R+HHCRRCG V C  C+P       +  + P  +R C+ CY +      LL+W
Sbjct:   35 QWVYDDETSNCMLCNT------------LFTMITRKHHCRRCGNVICHNCSPHKRR---ISSTDPFPMRVCNTCYAAVDEHFALLEW 106          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A0A6P8XNM2_DROAB (LOW QUALITY PROTEIN: rabankyrin-5-like n=1 Tax=Drosophila albomicans TaxID=7291 RepID=A0A6P8XNM2_DROAB)

HSP 1 Score: 61.6 bits (148), Expect = 4.670e-9
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    9 PKWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHCHLCY 84
            PK  P  +++ C  CGS+            F++ +R+HHCR CGRV C+ C+  NN  PIL++ +   VR CH+C+
Sbjct: 1066 PKESPWSESELCQECGSK------------FSLTMRKHHCRHCGRVLCSKCS--NNDVPILKFGINKPVRVCHICF 1127          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A0A7S1Q537_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1Q537_NEODS)

HSP 1 Score: 60.8 bits (146), Expect = 8.040e-9
Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 0
Query:    3 GGTGGAPK-WVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHCHLC 83
            G T G P  WVPD Q+  C +CG+             FT+VLRRHHCRRCG + C  C+    T P  +  +   VR C +C
Sbjct:    2 GQTQGVPAYWVPDSQSTSCSVCGAD------------FTVVLRRHHCRRCGELCCRQCSKARATVP--DRGIVKRVRVCTMC 69          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: B4K9F2_DROMO (FYVE-type domain-containing protein n=4 Tax=mojavensis species complex TaxID=198037 RepID=B4K9F2_DROMO)

HSP 1 Score: 60.8 bits (146), Expect = 8.870e-9
Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = 0
Query:   10 KWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHCHLCYRSPLLD 90
            +W+PD+ A  CM C  RR           FT+++RRHHCRRCGRV C  C+    T P L   +   VR C+ CY+  + +
Sbjct: 1458 EWIPDESATHCMCC--RRSA---------FTMLMRRHHCRRCGRVVCYACSTQRMTIPELYGDVE--VRVCNDCYKPVIAE 1525          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A0A7S4KGL3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KGL3_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 1.140e-8
Identity = 33/84 (39.29%), Postives = 41/84 (48.81%), Query Frame = 0
Query:   10 KWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRP---ILEWSLPHAVRHCHLCYRSPLLD 90
            +W+ DD    C  C +             F++V+RRHHCR CGR+ CA C P N   P   IL  + P  VR C LCY    LD
Sbjct:  110 EWLDDDAHSHCFHCNNP------------FSVVVRRHHCRLCGRIFCADCCPPNKDVPFPAILNHNFP--VRACCLCYNMESLD 179          
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Match: A0A6G0WE25_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE25_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.150e-8
Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 0
Query:   10 KWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRRCGRVACAFCAPTNNTRPILEWSLPHAVRHCHLCYRS 86
            KWVPD +   CM C +            +FT++ R+HHCRRCG + CA C+P  N R +     P  VR C+ CY +
Sbjct:   17 KWVPDKETDKCMNCNA------------MFTVINRKHHCRRCGHIVCANCSP--NIRRMSPQD-PFPVRVCNPCYTA 78          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71996.14876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482UR88_9ARCH3.990e-2751.72FYVE-type domain-containing protein n=1 Tax=archae... [more]
A9UQ85_MONBE6.040e-1749.32FYVE-type domain-containing protein (Fragment) n=1... [more]
D8LE09_ECTSI1.060e-1553.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3P7GJ14_TOXCA9.750e-1040.00FYVE-type domain-containing protein n=1 Tax=Toxoca... [more]
A0A0P1B090_PLAHL4.540e-935.63Early endosome antigen 1-like n=1 Tax=Plasmopara h... [more]
A0A6P8XNM2_DROAB4.670e-938.16LOW QUALITY PROTEIN: rabankyrin-5-like n=1 Tax=Dro... [more]
A0A7S1Q537_NEODS8.040e-940.24Hypothetical protein (Fragment) n=1 Tax=Neobodo de... [more]
B4K9F2_DROMO8.870e-939.51FYVE-type domain-containing protein n=4 Tax=mojave... [more]
A0A7S4KGL3_9EUKA1.140e-839.29Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A6G0WE25_9STRA1.150e-838.96Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 6..89
e-value: 5.2E-4
score: 22.9
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 10..86
e-value: 4.0E-12
score: 46.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..89
e-value: 6.4E-15
score: 56.6
NoneNo IPR availablePANTHERPTHR39490FAMILY NOT NAMEDcoord: 8..85
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 14..88
score: 10.113
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 9..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71996contigH-elongata_contig71996:1104..2421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71996.14876.1mRNA_H-elongata_contig71996.14876.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71996 1104..2421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71996.14876.1 ID=prot_H-elongata_contig71996.14876.1|Name=mRNA_H-elongata_contig71996.14876.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
GRGGTGGAPKWVPDDQAKGCMLCGSRRVLPAREYSLVLFTIVLRRHHCRR
CGRVACAFCAPTNNTRPILEWSLPHAVRHCHLCYRSPLLDW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD