prot_H-elongata_contig71993.14875.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71993.14875.1
Unique Nameprot_H-elongata_contig71993.14875.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A6H5KP25_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP25_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 2.140e-110
Identity = 163/197 (82.74%), Postives = 181/197 (91.88%), Query Frame = 0
Query:    1 NEDLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDLDAVVIAKLRAAAALVFLDQKEYAK 197
            N DLDAYISRY GYTK+RRL+WIAQ+CP L+ DCY+ AL+LLRQGINTQ+YR+IS RA  L+GPE+A D+EWVEQVDR YQQS +RLEAELNSYK N+IKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADM NFIHVNNYV++AEHTPDLD+VV AKLRAAA LV LDQ++YAK
Sbjct:   91 NFDLDAYISRYGGYTKLRRLDWIAQRCPTLAPDCYRAALTLLRQGINTQSYRDISTRAVVLMGPEHAVDTEWVEQVDRRYQQSVDRLEAELNSYKINLIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMGNFIHVNNYVLRAEHTPDLDSVVKAKLRAAAGLVHLDQRDYAK 287          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A7I4EGU5_PHYPA (RPN7 domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4EGU5_PHYPA)

HSP 1 Score: 200 bits (508), Expect = 4.930e-60
Identity = 100/196 (51.02%), Postives = 138/196 (70.41%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQKCPA--LSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 195
            D+++Y S Y+G+TK+ RL +IA  C +  L  +  + AL  +R+G NT  ++E   R +  LG  Y  D EW++ V+R   Q  E+LE ELN YKTN+IKESIRMGYN+LGD  Y RGDL+QA +CY RTRDYCTT++H   MCL+VI +S ++ +F+HV+NYV KA+ TPD+ D VV+AKL+ AA L  L+ K+Y
Sbjct:   20 DVESYASLYTGHTKIARLHFIADHCNSRNLDLEALRMALDEIRKGENTVLFKECVERLNGRLGLGYGLDQEWIDTVERRAAQRQEKLEVELNGYKTNLIKESIRMGYNDLGDFHYSRGDLQQAFQCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVQDPVVLAKLKCAAGLAHLESKKY 215          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A1D1ZLT6_9ARAE (COP9 signalosome complex subunit 1 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZLT6_9ARAE)

HSP 1 Score: 203 bits (516), Expect = 7.640e-60
Identity = 103/196 (52.55%), Postives = 135/196 (68.88%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQKC--PALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 195
            D++AY   YSG TK+ RL +IA +C  PA+  +  + A   +R+G NTQ YRE+  +    LGP Y  D  WV+ VDR  +Q  E+LE ELN Y+TN+IKESIRMGYN+ GD  Y  G+L +A K Y RTRDYCTT++H   MCL+VI +S ++  F+HV+NYV KAE TPDL D V +AKLR+AA L FL+ K+Y
Sbjct:   63 DVEAYAGLYSGRTKVARLLFIADRCGNPAMEVEALRMAYDEIRKGENTQLYREVVPKIGGRLGPRYEMDMGWVDSVDRRAEQRKEKLENELNGYRTNLIKESIRMGYNDFGDFYYAHGNLGEAFKNYVRTRDYCTTSKHIIHMCLNVILVSIELGQFMHVSNYVSKAEQTPDLHDPVTVAKLRSAAGLAFLETKKY 258          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A176VCI3_MARPO (PCI domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VCI3_MARPO)

HSP 1 Score: 202 bits (513), Expect = 2.180e-59
Identity = 103/196 (52.55%), Postives = 136/196 (69.39%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQKCP--ALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 195
            D+++Y S Y+G+TK+ RL +IA  C   AL  +  + A   +++G NT  YRE   + +  LG  Y  D EWV+ VDR   Q  E+LE ELN YKTN+IKESIRMGYN+LGD  Y RGDL+QA KCY RTRDYCTT++H   MCL+VI +S ++  F+HV+NYV KA+ TPD+ D +V+AKLR AA L  L+ K+Y
Sbjct:   47 DVESYASLYTGHTKIARLHFIADHCHSRALELEALRMASDEIKRGENTALYRESVDKIAGRLGSTYLLDQEWVDVVDRRAAQRQEKLEMELNGYKTNLIKESIRMGYNDLGDFFYGRGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGQFVHVSNYVSKADQTPDVQDPIVLAKLRCAAGLAHLESKKY 242          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A9RVN7_PHYPA (Predicted protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVN7_PHYPA)

HSP 1 Score: 200 bits (508), Expect = 4.430e-59
Identity = 100/196 (51.02%), Postives = 138/196 (70.41%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQKCPA--LSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 195
            D+++Y S YSG+TK+ RL +IA    +  L  +  + AL  +R+G NT  ++E   + +  LGP Y  D EW++ V+R   Q  E+LE ELN Y+TN+IKESIRMGYN+LGD  Y RGDL+QA KCY RTRDYCTT++H   MCL+VI +S ++ +F+HV+NYV KA+ TPD+ D VV+AKL+ AA L  L+ K+Y
Sbjct:   20 DVESYASLYSGHTKIARLHFIADHSNSRNLELEALRMALDEIRKGENTVLFKECVEKINGRLGPGYGLDQEWIDTVERRAAQRQEKLEMELNGYRTNLIKESIRMGYNDLGDFHYARGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVQDPVVLAKLKCAAGLAHLESKKY 215          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: D8T3M7_SELML (Uncharacterized protein FUS6-1 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T3M7_SELML)

HSP 1 Score: 199 bits (505), Expect = 1.540e-58
Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQ--KCPALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 195
            DL+AY   YSG TK+ RL +IA   K   L  +  + A + +R+  NT  Y+E+  +    LG  YA D EWV+ VDR   Q  E+L+ ELN YKTN+IKESIRMGYN+LGD  Y RGDL+QA KCY RTRDYCTT++H   MCL+VI +S ++ +F+HV+NYV KA+ TPD+ D +++AKL+ AA L +L+ K+Y
Sbjct:   25 DLEAYAGLYSGRTKVTRLFFIADHAKSHNLELEALRMAHNEIRRAENTLLYKEVVDKIGGRLGAAYARDQEWVDVVDRRAVQRQEKLDMELNGYKTNLIKESIRMGYNDLGDFFYSRGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDIQDPIILAKLKCAAGLAYLESKKY 220          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A397H0T5_9GLOM (PCI domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397H0T5_9GLOM)

HSP 1 Score: 196 bits (499), Expect = 1.480e-57
Identity = 102/208 (49.04%), Postives = 140/208 (67.31%), Query Frame = 0
Query:    1 NEDLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQG-INTQAYREISARASQLLG----PEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDLDAVVIAKLRAAAALVFLDQKEYAKVKELGL 203
            N DL++YIS Y G+TK+ RL +IA++CP L  D YK AL  LR   ++   Y   +++ +++L     P Y+ D  WV+   +  +   ERLE EL +YK N+IKESIRMG+N+LGD  Y  G+L  ALKCY+RTRDYCTT +H  EMCL+VI++S ++ NF HV++YVIKAE TPD+  +V AKL+ AAAL  LD  +Y +   L L
Sbjct:   24 NLDLESYISNYKGHTKVDRLLFIAKRCPQLQIDAYKLALQELRDNSLDHTRYNAAASKLNEVLAAQGYPSYSIDLNWVDSTQKRAKSLLERLEVELKNYKNNLIKESIRMGHNDLGDHYYNWGNLTNALKCYSRTRDYCTTAKHVIEMCLNVIKVSIELGNFSHVHSYVIKAESTPDIQPLVQAKLKVAAALAHLDNNKYKQAANLFL 231          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: L8GVV1_ACACA (PCI domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVV1_ACACA)

HSP 1 Score: 196 bits (497), Expect = 2.810e-57
Identity = 96/198 (48.48%), Postives = 136/198 (68.69%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-----DAVVIAKLRAAAALVFLDQKEY 195
            DL+ Y+S YSG+TK+ R  +IA++   L  +  + AL  +++  NT  YRE+  +A +  G  + +D  W++ V++  QQ  +RLE ELN Y+TN+IKESIRMG+N+LGD  Y RGDL+ ALKCY RTRDYCTT++H+  MCL+VI++S +M NF HV NYV KAE  P++     D VV+AKL+  A L  LD ++Y
Sbjct:   28 DLEGYLSNYSGHTKIFRAIFIAERSKDLELEATRIALEEIKKTHNTALYREVVDKAIEKHGGLFTKDQAWIDSVEKKAQQQNDRLEQELNGYRTNLIKESIRMGHNDLGDFHYDRGDLQSALKCYVRTRDYCTTSKHNISMCLNVIKVSIEMGNFAHVVNYVNKAEQEPEVRDASCDPVVVAKLKVCAGLAHLDTRKY 225          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A7I8LNG5_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LNG5_SPIIN)

HSP 1 Score: 194 bits (494), Expect = 7.330e-57
Identity = 97/196 (49.49%), Postives = 134/196 (68.37%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQKC--PALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPD-LDAVVIAKLRAAAALVFLDQKEY 195
            D++AY   YSG TK+ RL ++A++C    +  +  + A   +++G NTQ YRE+  +    LGP+Y  D  WV+ VDR  +   E+LE ELN Y+TN+IKESIRMGYN+ GD  Y  G+L +A K Y RTRDYCTT++H  +MCL+VI +S ++  F+HV+NYV KAE  PD LD+V +AKLR AA L FL+ K+Y
Sbjct:   34 DVEAYAGLYSGRTKISRLLFVAERCGNQGMEIEALRMAYDEIKKGENTQMYREVVQKIGGRLGPQYEMDQAWVDTVDRRAELRKEKLENELNGYRTNLIKESIRMGYNDFGDFYYAHGNLGEAFKNYVRTRDYCTTSKHIIQMCLNVILVSIELGQFMHVSNYVSKAEQPPDVLDSVTVAKLRCAAGLAFLETKKY 229          
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A453J7G5_AEGTS (RPN7 domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453J7G5_AEGTS)

HSP 1 Score: 190 bits (483), Expect = 9.070e-57
Identity = 96/196 (48.98%), Postives = 132/196 (67.35%), Query Frame = 0
Query:    3 DLDAYISRYSGYTKMRRLEWIAQKC--PALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPD-LDAVVIAKLRAAAALVFLDQKEY 195
            D++AY ++YSG T++ RL +IA++C   A+  +  + A    R   +T  Y +   + +  LGP Y  D  WV+ V+R  +Q  E+LE ELN Y+TN+IKESIRMGYN++GD  Y  G L +A K Y RTRDYCTT++H  +MC+HVI +S ++  F HV NYV KAE TPD LDAV++AKLRAAA L  L+ K+Y
Sbjct:   36 DVEAYAAQYSGRTRVARLLFIAERCGVEAIQLEALRMAHDEARAREDTVLYLDAVLKINSRLGPRYRHDQAWVDSVNRRAEQRKEKLETELNGYRTNLIKESIRMGYNDIGDFFYAHGHLSEAFKSYIRTRDYCTTSKHIVQMCMHVILVSIELGQFAHVTNYVSKAEQTPDTLDAVIVAKLRAAAGLANLETKKY 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP25_9PHAE2.140e-11082.74PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7I4EGU5_PHYPA4.930e-6051.02RPN7 domain-containing protein n=1 Tax=Physcomitri... [more]
A0A1D1ZLT6_9ARAE7.640e-6052.55COP9 signalosome complex subunit 1 (Fragment) n=1 ... [more]
A0A176VCI3_MARPO2.180e-5952.55PCI domain-containing protein n=2 Tax=Marchantia p... [more]
A9RVN7_PHYPA4.430e-5951.02Predicted protein n=3 Tax=Physcomitrium patens Tax... [more]
D8T3M7_SELML1.540e-5851.53Uncharacterized protein FUS6-1 n=2 Tax=Selaginella... [more]
A0A397H0T5_9GLOM1.480e-5749.04PCI domain-containing protein n=1 Tax=Diversispora... [more]
L8GVV1_ACACA2.810e-5748.48PCI domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A7I8LNG5_SPIIN7.330e-5749.49Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A453J7G5_AEGTS9.070e-5748.98RPN7 domain-containing protein n=2 Tax=Aegilops ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 2..203
e-value: 3.3E-68
score: 232.3
NoneNo IPR availablePANTHERPTHR1414526S PROTESOME SUBUNIT 6coord: 3..197
IPR01958526S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1PFAMPF10602RPN7coord: 69..200
e-value: 2.4E-31
score: 108.7
IPR033008COP9 signalosome complex subunit 1PANTHERPTHR14145:SF2COP9 SIGNALOSOME COMPLEX SUBUNIT 1coord: 3..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71993contigH-elongata_contig71993:936..3055 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71993.14875.1mRNA_H-elongata_contig71993.14875.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71993 936..3055 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71993.14875.1 ID=prot_H-elongata_contig71993.14875.1|Name=mRNA_H-elongata_contig71993.14875.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
NEDLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQGINTQA
YREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIK
ESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEI
SADMRNFIHVNNYVIKAEHTPDLDAVVIAKLRAAAALVFLDQKEYAKVKE
LGLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019585Rpn7/CSN1
IPR033008CSN1