mRNA_H-elongata_contig71993.14875.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A6H5KP25_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP25_9PHAE) HSP 1 Score: 336 bits (862), Expect = 2.140e-110 Identity = 163/197 (82.74%), Postives = 181/197 (91.88%), Query Frame = 1
Query: 1 NEDLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDLDAVVIAKLRAAAALVFLDQKEYAK 591
N DLDAYISRY GYTK+RRL+WIAQ+CP L+ DCY+ AL+LLRQGINTQ+YR+IS RA L+GPE+A D+EWVEQVDR YQQS +RLEAELNSYK N+IKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADM NFIHVNNYV++AEHTPDLD+VV AKLRAAA LV LDQ++YAK
Sbjct: 91 NFDLDAYISRYGGYTKLRRLDWIAQRCPTLAPDCYRAALTLLRQGINTQSYRDISTRAVVLMGPEHAVDTEWVEQVDRRYQQSVDRLEAELNSYKINLIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMGNFIHVNNYVLRAEHTPDLDSVVKAKLRAAAGLVHLDQRDYAK 287
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A7I4EGU5_PHYPA (RPN7 domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4EGU5_PHYPA) HSP 1 Score: 200 bits (508), Expect = 4.930e-60 Identity = 100/196 (51.02%), Postives = 138/196 (70.41%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQKCPA--LSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 585
D+++Y S Y+G+TK+ RL +IA C + L + + AL +R+G NT ++E R + LG Y D EW++ V+R Q E+LE ELN YKTN+IKESIRMGYN+LGD Y RGDL+QA +CY RTRDYCTT++H MCL+VI +S ++ +F+HV+NYV KA+ TPD+ D VV+AKL+ AA L L+ K+Y
Sbjct: 20 DVESYASLYTGHTKIARLHFIADHCNSRNLDLEALRMALDEIRKGENTVLFKECVERLNGRLGLGYGLDQEWIDTVERRAAQRQEKLEVELNGYKTNLIKESIRMGYNDLGDFHYSRGDLQQAFQCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVQDPVVLAKLKCAAGLAHLESKKY 215
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A1D1ZLT6_9ARAE (COP9 signalosome complex subunit 1 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZLT6_9ARAE) HSP 1 Score: 203 bits (516), Expect = 7.640e-60 Identity = 103/196 (52.55%), Postives = 135/196 (68.88%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQKC--PALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 585
D++AY YSG TK+ RL +IA +C PA+ + + A +R+G NTQ YRE+ + LGP Y D WV+ VDR +Q E+LE ELN Y+TN+IKESIRMGYN+ GD Y G+L +A K Y RTRDYCTT++H MCL+VI +S ++ F+HV+NYV KAE TPDL D V +AKLR+AA L FL+ K+Y
Sbjct: 63 DVEAYAGLYSGRTKVARLLFIADRCGNPAMEVEALRMAYDEIRKGENTQLYREVVPKIGGRLGPRYEMDMGWVDSVDRRAEQRKEKLENELNGYRTNLIKESIRMGYNDFGDFYYAHGNLGEAFKNYVRTRDYCTTSKHIIHMCLNVILVSIELGQFMHVSNYVSKAEQTPDLHDPVTVAKLRSAAGLAFLETKKY 258
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A176VCI3_MARPO (PCI domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VCI3_MARPO) HSP 1 Score: 202 bits (513), Expect = 2.180e-59 Identity = 103/196 (52.55%), Postives = 136/196 (69.39%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQKCP--ALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 585
D+++Y S Y+G+TK+ RL +IA C AL + + A +++G NT YRE + + LG Y D EWV+ VDR Q E+LE ELN YKTN+IKESIRMGYN+LGD Y RGDL+QA KCY RTRDYCTT++H MCL+VI +S ++ F+HV+NYV KA+ TPD+ D +V+AKLR AA L L+ K+Y
Sbjct: 47 DVESYASLYTGHTKIARLHFIADHCHSRALELEALRMASDEIKRGENTALYRESVDKIAGRLGSTYLLDQEWVDVVDRRAAQRQEKLEMELNGYKTNLIKESIRMGYNDLGDFFYGRGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGQFVHVSNYVSKADQTPDVQDPIVLAKLRCAAGLAHLESKKY 242
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A9RVN7_PHYPA (Predicted protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVN7_PHYPA) HSP 1 Score: 200 bits (508), Expect = 4.430e-59 Identity = 100/196 (51.02%), Postives = 138/196 (70.41%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQKCPA--LSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 585
D+++Y S YSG+TK+ RL +IA + L + + AL +R+G NT ++E + + LGP Y D EW++ V+R Q E+LE ELN Y+TN+IKESIRMGYN+LGD Y RGDL+QA KCY RTRDYCTT++H MCL+VI +S ++ +F+HV+NYV KA+ TPD+ D VV+AKL+ AA L L+ K+Y
Sbjct: 20 DVESYASLYSGHTKIARLHFIADHSNSRNLELEALRMALDEIRKGENTVLFKECVEKINGRLGPGYGLDQEWIDTVERRAAQRQEKLEMELNGYRTNLIKESIRMGYNDLGDFHYARGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVQDPVVLAKLKCAAGLAHLESKKY 215
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: D8T3M7_SELML (Uncharacterized protein FUS6-1 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T3M7_SELML) HSP 1 Score: 199 bits (505), Expect = 1.540e-58 Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQ--KCPALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-DAVVIAKLRAAAALVFLDQKEY 585
DL+AY YSG TK+ RL +IA K L + + A + +R+ NT Y+E+ + LG YA D EWV+ VDR Q E+L+ ELN YKTN+IKESIRMGYN+LGD Y RGDL+QA KCY RTRDYCTT++H MCL+VI +S ++ +F+HV+NYV KA+ TPD+ D +++AKL+ AA L +L+ K+Y
Sbjct: 25 DLEAYAGLYSGRTKVTRLFFIADHAKSHNLELEALRMAHNEIRRAENTLLYKEVVDKIGGRLGAAYARDQEWVDVVDRRAVQRQEKLDMELNGYKTNLIKESIRMGYNDLGDFFYSRGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDIQDPIILAKLKCAAGLAYLESKKY 220
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A397H0T5_9GLOM (PCI domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397H0T5_9GLOM) HSP 1 Score: 196 bits (499), Expect = 1.480e-57 Identity = 102/208 (49.04%), Postives = 140/208 (67.31%), Query Frame = 1
Query: 1 NEDLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQG-INTQAYREISARASQLLG----PEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDLDAVVIAKLRAAAALVFLDQKEYAKVKELGL 609
N DL++YIS Y G+TK+ RL +IA++CP L D YK AL LR ++ Y +++ +++L P Y+ D WV+ + + ERLE EL +YK N+IKESIRMG+N+LGD Y G+L ALKCY+RTRDYCTT +H EMCL+VI++S ++ NF HV++YVIKAE TPD+ +V AKL+ AAAL LD +Y + L L
Sbjct: 24 NLDLESYISNYKGHTKVDRLLFIAKRCPQLQIDAYKLALQELRDNSLDHTRYNAAASKLNEVLAAQGYPSYSIDLNWVDSTQKRAKSLLERLEVELKNYKNNLIKESIRMGHNDLGDHYYNWGNLTNALKCYSRTRDYCTTAKHVIEMCLNVIKVSIELGNFSHVHSYVIKAESTPDIQPLVQAKLKVAAALAHLDNNKYKQAANLFL 231
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: L8GVV1_ACACA (PCI domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVV1_ACACA) HSP 1 Score: 196 bits (497), Expect = 2.810e-57 Identity = 96/198 (48.48%), Postives = 136/198 (68.69%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPDL-----DAVVIAKLRAAAALVFLDQKEY 585
DL+ Y+S YSG+TK+ R +IA++ L + + AL +++ NT YRE+ +A + G + +D W++ V++ QQ +RLE ELN Y+TN+IKESIRMG+N+LGD Y RGDL+ ALKCY RTRDYCTT++H+ MCL+VI++S +M NF HV NYV KAE P++ D VV+AKL+ A L LD ++Y
Sbjct: 28 DLEGYLSNYSGHTKIFRAIFIAERSKDLELEATRIALEEIKKTHNTALYREVVDKAIEKHGGLFTKDQAWIDSVEKKAQQQNDRLEQELNGYRTNLIKESIRMGHNDLGDFHYDRGDLQSALKCYVRTRDYCTTSKHNISMCLNVIKVSIEMGNFAHVVNYVNKAEQEPEVRDASCDPVVVAKLKVCAGLAHLDTRKY 225
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A7I8LNG5_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LNG5_SPIIN) HSP 1 Score: 194 bits (494), Expect = 7.330e-57 Identity = 97/196 (49.49%), Postives = 134/196 (68.37%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQKC--PALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPD-LDAVVIAKLRAAAALVFLDQKEY 585
D++AY YSG TK+ RL ++A++C + + + A +++G NTQ YRE+ + LGP+Y D WV+ VDR + E+LE ELN Y+TN+IKESIRMGYN+ GD Y G+L +A K Y RTRDYCTT++H +MCL+VI +S ++ F+HV+NYV KAE PD LD+V +AKLR AA L FL+ K+Y
Sbjct: 34 DVEAYAGLYSGRTKISRLLFVAERCGNQGMEIEALRMAYDEIKKGENTQMYREVVQKIGGRLGPQYEMDQAWVDTVDRRAELRKEKLENELNGYRTNLIKESIRMGYNDFGDFYYAHGNLGEAFKNYVRTRDYCTTSKHIIQMCLNVILVSIELGQFMHVSNYVSKAEQPPDVLDSVTVAKLRCAAGLAFLETKKY 229
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Match: A0A453J7G5_AEGTS (RPN7 domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453J7G5_AEGTS) HSP 1 Score: 190 bits (483), Expect = 9.070e-57 Identity = 96/196 (48.98%), Postives = 132/196 (67.35%), Query Frame = 1
Query: 7 DLDAYISRYSGYTKMRRLEWIAQKC--PALSADCYKTALSLLRQGINTQAYREISARASQLLGPEYAEDSEWVEQVDRSYQQSGERLEAELNSYKTNMIKESIRMGYNELGDLSYRRGDLKQALKCYARTRDYCTTNRHSAEMCLHVIEISADMRNFIHVNNYVIKAEHTPD-LDAVVIAKLRAAAALVFLDQKEY 585
D++AY ++YSG T++ RL +IA++C A+ + + A R +T Y + + + LGP Y D WV+ V+R +Q E+LE ELN Y+TN+IKESIRMGYN++GD Y G L +A K Y RTRDYCTT++H +MC+HVI +S ++ F HV NYV KAE TPD LDAV++AKLRAAA L L+ K+Y
Sbjct: 36 DVEAYAAQYSGRTRVARLLFIAERCGVEAIQLEALRMAHDEARAREDTVLYLDAVLKINSRLGPRYRHDQAWVDSVNRRAEQRKEKLETELNGYRTNLIKESIRMGYNDIGDFFYAHGHLSEAFKSYIRTRDYCTTSKHIVQMCMHVILVSIELGQFAHVTNYVSKAEQTPDTLDAVIVAKLRAAAGLANLETKKY 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71993.14875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71993.14875.1 >prot_H-elongata_contig71993.14875.1 ID=prot_H-elongata_contig71993.14875.1|Name=mRNA_H-elongata_contig71993.14875.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp NEDLDAYISRYSGYTKMRRLEWIAQKCPALSADCYKTALSLLRQGINTQAback to top mRNA from alignment at H-elongata_contig71993:936..3055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71993.14875.1 ID=mRNA_H-elongata_contig71993.14875.1|Name=mRNA_H-elongata_contig71993.14875.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2120bp|location=Sequence derived from alignment at H-elongata_contig71993:936..3055+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71993:936..3055+ >mRNA_H-elongata_contig71993.14875.1 ID=mRNA_H-elongata_contig71993.14875.1|Name=mRNA_H-elongata_contig71993.14875.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1230bp|location=Sequence derived from alignment at H-elongata_contig71993:936..3055+ (Himanthalia elongata Himel1 dioecious)back to top |