prot_H-elongata_contig71889.14866.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71889.14866.1
Unique Nameprot_H-elongata_contig71889.14866.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: D7FSE0_ECTSI (Proteasome endopeptidase complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSE0_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 4.030e-78
Identity = 115/125 (92.00%), Postives = 122/125 (97.60%), Query Frame = 0
Query:    2 GGFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            GGF FENHHRN RIA ELA+SGK+G++PRAKLTGTTICGC++KGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRV+TACTMLKRMLFRYQ
Sbjct:   33 GGFDFENHHRNARIAAELAKSGKEGTLPRAKLTGTTICGCIYKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVVTACTMLKRMLFRYQ 157          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: A0A835ZKI2_9STRA (Proteasome endopeptidase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKI2_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.790e-71
Identity = 107/126 (84.92%), Postives = 114/126 (90.48%), Query Frame = 0
Query:    1 TGGFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
             GGF FEN HRN RI E LA+ G +G +PRAKLTGTTICGCV+K G+VLGADTRATGGTEV DKNCEKIHYLAPNIYCCGAGTAADTEKTTE+IS QLDLLRLSTGTQSRV+TACTMLKRMLFRYQ
Sbjct:   24 AGGFNFENCHRNARIVESLAKEGVKGGLPRAKLTGTTICGCVYKDGIVLGADTRATGGTEVCDKNCEKIHYLAPNIYCCGAGTAADTEKTTELISSQLDLLRLSTGTQSRVVTACTMLKRMLFRYQ 149          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: A0A7S3VGC6_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGC6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.910e-56
Identity = 94/133 (70.68%), Postives = 111/133 (83.46%), Query Frame = 0
Query:    1 TGGFGFENHHRNKRIAEELARS------GKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTG-TQSRVITACTMLKRMLFRYQ 126
            +GGF F+N HRN  I E++A+S      G  G +P+A  TGTTI G  +KGGVVLGADTRATGGTEV DKNCEKIHYLAPNIYCCGAGTAADTEKTTE+IS QL+LLR++TG +QSRV+T+CTMLKRML++YQ
Sbjct:   17 SGGFSFDNIHRNAMI-EQMAKSNANVSNGPAGYLPKATKTGTTIVGLCYKGGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTELISSQLELLRMNTGGSQSRVVTSCTMLKRMLYKYQ 148          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: W7TKR2_9STRA (Proteasome subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKR2_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.470e-55
Identity = 93/124 (75.00%), Postives = 99/124 (79.84%), Query Frame = 0
Query:    3 GFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            GF F+N+ RN  +  E         +P A  TGTTI G  FK GVVLGADTRATGGTEV DKNCEKIHYLAPNIYCCGAGTAADTEKTTEMIS QLDLLRLSTG+ SRV+TACTMLKRMLFRYQ
Sbjct:   20 GFNFDNYARNASLPTETTMH-----LPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQ 138          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: A0A7S4ECT6_9STRA (Proteasome subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECT6_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.380e-54
Identity = 92/126 (73.02%), Postives = 101/126 (80.16%), Query Frame = 0
Query:    1 TGGFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            TGGF F    RN R+A   A +G   SMP    TGTTICG V+ GGVVLGADTRATGG+EV DKNCEKIHYLAPNIYCCGAGTAADTEKTTE+I+ QL+LLRL TGTQSRV+ A T+LKR LFRYQ
Sbjct:   21 TGGFDFGLAARNARLA---AAAGATASMPEPMSTGTTICGVVYAGGVVLGADTRATGGSEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTELIASQLELLRLGTGTQSRVVAATTLLKRTLFRYQ 143          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: A0A812UR08_SYMMI (PBB2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UR08_SYMMI)

HSP 1 Score: 176 bits (445), Expect = 2.890e-54
Identity = 88/125 (70.40%), Postives = 102/125 (81.60%), Query Frame = 0
Query:    2 GGFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            GGF F+   RN    E L  S     +P+A  TGTTICG V+K G+VLGADTRATGG+EV+DKNCEKIHYLAPNI+CCGAGTAADTEKTTE+I+  L+LLRLSTGTQSRV+T+ TMLKRML+RYQ
Sbjct:   21 GGFSFDLCKRN----EMLMSSSNSSVLPKAWKTGTTICGIVYKDGIVLGADTRATGGSEVMDKNCEKIHYLAPNIWCCGAGTAADTEKTTELIASNLELLRLSTGTQSRVVTSLTMLKRMLYRYQ 141          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: F0YIE7_AURAN (Proteasome subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIE7_AURAN)

HSP 1 Score: 176 bits (446), Expect = 9.470e-53
Identity = 90/126 (71.43%), Postives = 103/126 (81.75%), Query Frame = 0
Query:    1 TGGFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            TGGF F    RN++IA   A  G+   MP+   TGTTICG V+ GG+VLGADTRAT G+EV DKNCEKIHYLAPNIYCCGAGTAADTEKTTE+I+ QL+LLRLSTGTQSRV+ A T+LKRMLF+YQ
Sbjct:   16 TGGFDFGMTARNEQIA--AAAGGRP--MPQPMSTGTTICGMVYDGGIVLGADTRATAGSEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTELIASQLELLRLSTGTQSRVVAAVTLLKRMLFKYQ 137          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: A0A6S9FRF2_HETAK (Proteasome subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRF2_HETAK)

HSP 1 Score: 175 bits (443), Expect = 4.790e-52
Identity = 90/126 (71.43%), Postives = 102/126 (80.95%), Query Frame = 0
Query:    2 GGFGFENHHRNKRIAEELARSGKQGSMP-RAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            GGF FEN  RN  I    ++ G   ++P  AK TGTTI G ++K GVVLGADTRATGGTEV DKNCEKIHYLAPNIYCCGAGTAADTEKTTE+IS QL+LLR++TG+QSR+ TA TML RMLFRYQ
Sbjct:   27 GGFNFENTSRNAFIQASASKDGN--TIPLSAKKTGTTIVGVIYKDGVVLGADTRATGGTEVCDKNCEKIHYLAPNIYCCGAGTAADTEKTTELISSQLELLRMNTGSQSRIATASTMLHRMLFRYQ 150          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: A0A7S2CLY8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLY8_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.250e-51
Identity = 88/125 (70.40%), Postives = 102/125 (81.60%), Query Frame = 0
Query:    2 GGFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            GGF F+   R+++I   +A  G  G +P+A  TGTTI G ++K GVVLGADTRATGGTEV DKNCEKIHYL+ NIYCCGAGTAADTEKTTEMIS QL+L RL+TG QSRV+TA T+LKRMLFRYQ
Sbjct:   23 GGFAFDLCSRDQQIGTSIAAGG--GRLPQAMKTGTTIVGVIYKDGVVLGADTRATGGTEVCDKNCEKIHYLSDNIYCCGAGTAADTEKTTEMISSQLELHRLNTGMQSRVVTAVTLLKRMLFRYQ 145          
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Match: A0A7S1DCE2_CYCTE (Proteasome subunit beta n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCE2_CYCTE)

HSP 1 Score: 174 bits (441), Expect = 1.290e-51
Identity = 86/124 (69.35%), Postives = 101/124 (81.45%), Query Frame = 0
Query:    3 GFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVITACTMLKRMLFRYQ 126
            GF F++ HRNK IA+    SG   ++P A  TGTTI G V+K GVVLGADTRAT G EV +KNCEKIH++APNIYCCGAGTAADTEKTTE+IS QL+LLR+ T + SRV+TACT+LKRMLFRYQ
Sbjct:   41 GFSFDHFHRNKVIADAAKSSGA--ALPSATKTGTTIVGLVYKDGVVLGADTRATSGAEVAEKNCEKIHFIAPNIYCCGAGTAADTEKTTELISSQLELLRMDTRSPSRVVTACTLLKRMLFRYQ 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71889.14866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSE0_ECTSI4.030e-7892.00Proteasome endopeptidase complex n=2 Tax=Ectocarpu... [more]
A0A835ZKI2_9STRA2.790e-7184.92Proteasome endopeptidase complex n=1 Tax=Tribonema... [more]
A0A7S3VGC6_9STRA5.910e-5670.68Proteasome subunit beta n=1 Tax=Chaetoceros debili... [more]
W7TKR2_9STRA2.470e-5575.00Proteasome subunit beta n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S4ECT6_9STRA2.380e-5473.02Proteasome subunit beta n=1 Tax=Pelagomonas calceo... [more]
A0A812UR08_SYMMI2.890e-5470.40PBB2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
F0YIE7_AURAN9.470e-5371.43Proteasome subunit beta n=1 Tax=Aureococcus anopha... [more]
A0A6S9FRF2_HETAK4.790e-5271.43Proteasome subunit beta n=1 Tax=Heterosigma akashi... [more]
A0A7S2CLY8_9STRA1.250e-5170.40Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A7S1DCE2_CYCTE1.290e-5169.35Proteasome subunit beta n=1 Tax=Cyclophora tenuis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 34..124
e-value: 6.8E-20
score: 71.4
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 36..126
e-value: 3.8E-28
score: 100.4
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 26..126
IPR035216Proteasome subunit beta 7PANTHERPTHR11599:SF44AT05866P-RELATEDcoord: 20..126
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 20..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71889contigH-elongata_contig71889:427..1654 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71889.14866.1mRNA_H-elongata_contig71889.14866.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71889 427..1654 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71889.14866.1 ID=prot_H-elongata_contig71889.14866.1|Name=mRNA_H-elongata_contig71889.14866.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
TGGFGFENHHRNKRIAEELARSGKQGSMPRAKLTGTTICGCVFKGGVVLG
ADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDL
LRLSTGTQSRVITACTMLKRMLFRYQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR035216Proteasome_beta7