prot_H-elongata_contig71796.14852.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71796.14852.1
Unique Nameprot_H-elongata_contig71796.14852.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
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BLAST of mRNA_H-elongata_contig71796.14852.1 vs. uniprot
Match: D8LSX6_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSX6_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 4.830e-21
Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 0 
Query:    5 PSSEPHLNPSSAGELAADQWCERNCTALFEACCNCDPGKATRILEQSSERQLASR----MTRFRDDFQDSTLHVAASNGQAKVVQQLLARGADVNAVNNLGST 103
            PSS P  +   A  +   QWCERN  AL EACCN D GKA RIL Q+S   +       M   +DDF+D+ LH++A  G+  +V+ LLARGADV+A NNLGST
Sbjct:   51 PSSSPR-DELPAEVMKTGQWCERNSVALLEACCNRDVGKAARILGQASAEHVGEERMKNMVMLKDDFRDTALHLSACQGEVGIVKLLLARGADVHAQNNLGST 152
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BLAST of mRNA_H-elongata_contig71796.14852.1 vs. uniprot
Match: A0A2V3IRH3_9FLOR (Serine/threonine-protein kinase WNK2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRH3_9FLOR)

HSP 1 Score: 51.2 bits (121), Expect = 5.700e-5
Identity = 41/111 (36.94%), Postives = 55/111 (49.55%), Query Frame = 0 
Query:    9 PHLNPSSAGELAADQWCERNCTALFEACCNCDPGKATRILEQSSERQLASRMTRFRDDFQDSTLHVAASNGQAKVVQQLLARGADVNAVNNLGSTPLNRAAVAGMAEVRAL 119
            P   P +  E   DQ    NC  L + C     G+   +L++  ER  AS   RF D  + + LH+AA+ G  K+   LL RGADVNA +  G TPL  A +    EV+ L
Sbjct: 1178 PQEGPVTFREPKIDQKSYTNCLKLIDLCSR---GRYEEVLDKI-ERGGAS--PRFADYDRRTPLHIAAAEGHLKICALLLKRGADVNAKDRWGHTPLWDAKMNSHGEVQEL 1282
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BLAST of mRNA_H-elongata_contig71796.14852.1 vs. uniprot
Match: A0A3P9DIE1_9CICH (Uncharacterized protein n=1 Tax=Maylandia zebra TaxID=106582 RepID=A0A3P9DIE1_9CICH)

HSP 1 Score: 48.9 bits (115), Expect = 5.720e-5
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:   72 LHVAASNGQAKVVQQLLARGADVNAVNNLGSTPLNRAAVAG 112
            LH+A S G   VV++LL  GADVN  NNLG TPL++AA AG
Sbjct:   53 LHLACSFGHRDVVEELLKAGADVNLQNNLGDTPLHKAAYAG 93
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BLAST of mRNA_H-elongata_contig71796.14852.1 vs. uniprot
Match: S9NTH0_9DELT (Ankyrin repeat protein n=2 Tax=Cystobacter fuscus TaxID=43 RepID=S9NTH0_9DELT)

HSP 1 Score: 50.8 bits (120), Expect = 7.010e-5
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0 
Query:   64 RDDFQDSTLHVAASNGQAKVVQQLLARGADVNAVNNLGSTPL 105
            RDD Q + LH AA+ G+A +V+ LLARGA+VNA++ LG TPL
Sbjct:  155 RDDNQQTPLHRAAARGRAPIVEILLARGAEVNAIDGLGRTPL 196
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71796.14852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSX6_ECTSI4.830e-2150.49Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSX6... [more]
A0A2V3IRH3_9FLOR5.700e-536.94Serine/threonine-protein kinase WNK2 n=1 Tax=Graci... [more]
A0A3P9DIE1_9CICH5.720e-560.98Uncharacterized protein n=1 Tax=Maylandia zebra Ta... [more]
S9NTH0_9DELT7.010e-559.52Ankyrin repeat protein n=2 Tax=Cystobacter fuscus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 67..96
e-value: 0.0015
score: 27.8
coord: 27..56
e-value: 3600.0
score: 0.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 67..99
score: 12.903
NoneNo IPR availablePFAMPF13857Ank_5coord: 70..107
e-value: 3.3E-7
score: 30.4
NoneNo IPR availablePANTHERPTHR24133:SF40coord: 28..115
NoneNo IPR availablePANTHERPTHR24133FAMILY NOT NAMEDcoord: 28..115
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 12..119
e-value: 1.5E-16
score: 62.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 27..116
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 67..119
score: 17.608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71796contigH-elongata_contig71796:2620..2976 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71796.14852.1mRNA_H-elongata_contig71796.14852.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71796 2620..2976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71796.14852.1 ID=prot_H-elongata_contig71796.14852.1|Name=mRNA_H-elongata_contig71796.14852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
RSVLPSSEPHLNPSSAGELAADQWCERNCTALFEACCNCDPGKATRILEQ
SSERQLASRMTRFRDDFQDSTLHVAASNGQAKVVQQLLARGADVNAVNNL
GSTPLNRAAVAGMAEVRAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom