prot_H-elongata_contig71796.14851.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71796.14851.1
Unique Nameprot_H-elongata_contig71796.14851.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length216
Homology
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A6H5L2J2_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J2_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.220e-66
Identity = 114/170 (67.06%), Postives = 134/170 (78.82%), Query Frame = 0
Query:   61 RELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEG-GKETVAACAYQVSPTKSVRPLST-------------GQPYQLPP 216
            REL++++VP+RVE  YQ+  H++AL LRTLE N+WL +SWHPKGARCHVGG  PREKEQKAYTFSQTLR+ +RGLNI++V LARP ERV+ LD A RLDTP  +RLYVEIMASRSN +LVAV+E  G ET+AACAYQVSP+KSVRPLST             GQ Y LPP
Sbjct:    3 RELEQSIVPARVENAYQMDAHNLALQLRTLEGNIWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIRGLNIISVGLARPMERVVRLDLAPRLDTPATFRLYVEIMASRSNVVLVAVDEASGSETIAACAYQVSPSKSVRPLSTERLADLSVLPPLAGQAYVLPP 172          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: D8LSX7_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX7_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 1.120e-63
Identity = 107/144 (74.31%), Postives = 123/144 (85.42%), Query Frame = 0
Query:   74 TVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEG-GKETVAACAYQVSPTKSVRPLSTGQPYQLPP 216
            T++++  H+VAL LRTLE NMWL +SWHPKGARCHVGG  PREKEQKAYTFSQTLR+ + GLNIV+V LARP ERV+ LD A RLDTP  +RLYVEIMASRSN +LVAV+E  G ET+AACAYQVSP+KSVRPLSTGQ Y+LPP
Sbjct:   27 TLHEMDAHNVALQLRTLEGNMWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIWGLNIVSVGLARPMERVVRLDLAPRLDTPSTFRLYVEIMASRSNVVLVAVDEASGSETIAACAYQVSPSKSVRPLSTGQAYELPP 170          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A835YY55_9STRA (Fibronectin-binding protein A N-terminus-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY55_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.260e-41
Identity = 64/118 (54.24%), Postives = 88/118 (74.58%), Query Frame = 0
Query:   48 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYR 165
            LQ+VDFTT LL+ REL   +VP+RVE  +Q+   ++A+ LR +E + WL ISWHP+GARCH+G  PP+ KEQ++Y+FSQ LR LL+GL +V+V LA PFERV++  FA RL   P ++
Sbjct:    1 LQSVDFTTALLMTRELANAIVPARVENAFQIDAFNLAIGLRMVEGSEWLNISWHPQGARCHIGPAPPKGKEQQSYSFSQQLRTLLKGLTLVSVALAAPFERVVAFSFAQRLTDAPTHK 118          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A0G4ENT6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ENT6_VITBC)

HSP 1 Score: 154 bits (390), Expect = 5.830e-40
Identity = 80/174 (45.98%), Postives = 109/174 (62.64%), Query Frame = 0
Query:   43 QPAQKLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKSVRPLSTGQPYQLPP 216
            QP  K Q VDFTT LL  REL  ++VPS V + +QL   ++ L L TL    WL + W  K AR  +G  PP+ KE   ++FS  +R  L+GL + A+ L +PF R++ + FA RL   P ++L+VE+   RSN ILV+ +     ++AACAYQV  ++SVRPL TGQ YQLPP
Sbjct:   74 QPKAKKQTVDFTTLLLSCRELNASLVPSSVSSAFQLDDSNLLLGLTTLSGTRWLHLCWDAKAARLALGENPPK-KEILPFSFSHNIRLALKGLTLTAISLPQPFNRIVEMTFAPRLGRDPFFKLFVEVQGPRSNVILVSADTN---SIAACAYQVGASRSVRPLQTGQLYQLPP 243          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: UPI001A0787B3 (NFACT family protein n=1 Tax=Pseudanabaenaceae cyanobacterium LEGE 13415 TaxID=2777976 RepID=UPI001A0787B3)

HSP 1 Score: 144 bits (364), Expect = 8.750e-40
Identity = 78/170 (45.88%), Postives = 106/170 (62.35%), Query Frame = 0
Query:   48 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 216
            +Q VD+TT + +  EL+   +P+R E  YQ     V L+LRTL++  WL +SWHP+ AR H+  PPPR+ +   +TFSQ LR  L GL +V ++   P+ER I L FA R   P  + LY+EIM   SNAILV  E      +   A+QVS ++S VRP+ TGQPY+LPP
Sbjct:    1 MQPVDYTTLMAICAELRSQWLPARFEQAYQCDRFTVLLALRTLKKRGWLALSWHPQAARIHMSDPPPRDPD--TFTFSQQLRHQLGGLALVDIQPVSPWERAIDLQFAHRPGEPALWHLYIEIMGQYSNAILVNQENA----IVTAAHQVSSSQSSVRPIQTGQPYELPP 164          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: B1XM13_SYNP2 (Rqc2 homolog RqcH n=12 Tax=Synechococcus TaxID=1129 RepID=B1XM13_SYNP2)

HSP 1 Score: 152 bits (383), Expect = 2.080e-39
Identity = 79/171 (46.20%), Postives = 109/171 (63.74%), Query Frame = 0
Query:   47 KLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 216
            K+QAVD+TT + LV ELQR  VP+R+E VYQ     + L+LRTLE+  WL +SWHP+ AR H+G  PPR+ +   +TFS  LR L++G  ++ +EL +P+ERV+   F  R    P + LYVEIM   SN IL   ++     +   A Q+S  +S VRP+ TGQPY+ PP
Sbjct:    2 KIQAVDYTTLVALVTELQRDWVPARLEQVYQYDKQTLCLALRTLEKREWLWLSWHPQAARMHLGDRPPRDPD--TFTFSDQLRHLIKGSALLGIELIQPWERVVDFQFGRRPGEVPQWHLYVEIMGKHSNVILANADQ----QIVTTAQQISGDRSTVRPVQTGQPYEFPP 166          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: D8G6G5_9CYAN (Rqc2 homolog RqcH n=2 Tax=Microcoleaceae TaxID=1892252 RepID=D8G6G5_9CYAN)

HSP 1 Score: 152 bits (383), Expect = 2.210e-39
Identity = 84/170 (49.41%), Postives = 107/170 (62.94%), Query Frame = 0
Query:   48 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 216
            +Q VDFTT +    EL+   +P+R+E VYQ   H VAL+LRT+ R  WL ISWHP+GAR  +G PPPR  +   +TFSQ LR  L  L +VA+    P+ERVI L FA R   P  + LYVEIM+  SN IL   +      +  CA+QVS  +S VRP+ TGQPY+LPP
Sbjct:    4 VQPVDFTTLMAACCELRSDWLPARLEQVYQRDRHTVALALRTINRRGWLDISWHPQGARLCIGSPPPRTPD--TFTFSQQLRHQLGSLALVAIAQVAPWERVIDLQFARRPGEPALWHLYVEIMSKYSNVILTTQDN----LIVTCAHQVSAQQSSVRPIQTGQPYELPP 167          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: K9PVM5_9CYAN (Rqc2 homolog RqcH n=2 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9PVM5_9CYAN)

HSP 1 Score: 150 bits (380), Expect = 5.360e-39
Identity = 75/170 (44.12%), Postives = 109/170 (64.12%), Query Frame = 0
Query:   47 KLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKSVRPLSTGQPYQLPP 216
            K+QAVD+TT + LV EL++  VP+++E VYQ     + L+LRTL++  WL ISWHP+ AR H+G  PPR+ +   +TFS+ LR L++G  ++ +E  +P+ERV+ L F +R   P  + LYVEIM   SN IL    +  ++ +       S   SVRP+ TGQPYQ+PP
Sbjct:    2 KIQAVDYTTLVALVAELRQDWVPAKLEQVYQYDKQTICLALRTLKKRDWLWISWHPQAARIHMGDRPPRDPD--TFTFSEQLRHLIKGSALIGLEFIQPWERVVDLQFGTRPGDPAKFHLYVEIMGKHSNVILT---DADQKIITTAQQITSDRSSVRPVETGQPYQVPP 166          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A1Q2TU73_9SYNE (Rqc2 homolog RqcH n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A1Q2TU73_9SYNE)

HSP 1 Score: 150 bits (380), Expect = 5.870e-39
Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 0
Query:   47 KLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 216
            K+QAVD+TT + +V ELQ+  VP+R+E VYQ     + L+LRTLE+  WL +SWHP+ AR H+G  PPR+ +   +TFS  LR L++G  ++ + L +P+ERV+   F  R   PP + LYVEIM   SN IL   ++     +   A Q+S  +S VRP+ TGQPY+ PP
Sbjct:    2 KIQAVDYTTLVAVVTELQQDWVPARLEQVYQYDKQTLCLALRTLEKREWLWLSWHPQAARLHLGDRPPRDPD--TFTFSDQLRHLIKGSALLGIALIQPWERVVDFQFGDRPGEPPQWHLYVEIMGKHSNVILANADQ----QIVTTAQQISGDRSAVRPVQTGQPYEFPP 166          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A651DR26_9CYAN (Rqc2 homolog RqcH n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A651DR26_9CYAN)

HSP 1 Score: 150 bits (379), Expect = 7.130e-39
Identity = 81/170 (47.65%), Postives = 108/170 (63.53%), Query Frame = 0
Query:   48 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 216
            +Q VD TT   +  EL+   +P+R+E VYQ   H V+L+LRTLE   WL I WHP+ A   +GGPPPR  +   +TFSQ L+  L GL ++AV+L  P+ERV+   FA R   PP + LYVEIM   SNAIL   ++    T+   A+QVS  +S VRP+ TGQPY++PP
Sbjct:    1 MQPVDLTTLTAVCAELRDGWLPARLEQVYQRDRHMVSLALRTLEGRSWLNICWHPQAAHLCLGGPPPRTPD--TFTFSQQLKHQLGGLALIAVDLIHPWERVVDFQFAQRPGEPPLWHLYVEIMGKYSNAILTHADQ----TIVTAAHQVSRQQSSVRPIQTGQPYEMPP 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2J2_9PHAE1.220e-6667.06NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX7_ECTSI1.120e-6374.31NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YY55_9STRA5.260e-4154.24Fibronectin-binding protein A N-terminus-domain-co... [more]
A0A0G4ENT6_VITBC5.830e-4045.98Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
UPI001A0787B38.750e-4045.88NFACT family protein n=1 Tax=Pseudanabaenaceae cya... [more]
B1XM13_SYNP22.080e-3946.20Rqc2 homolog RqcH n=12 Tax=Synechococcus TaxID=112... [more]
D8G6G5_9CYAN2.210e-3949.41Rqc2 homolog RqcH n=2 Tax=Microcoleaceae TaxID=189... [more]
K9PVM5_9CYAN5.360e-3944.12Rqc2 homolog RqcH n=2 Tax=Leptolyngbya sp. PCC 737... [more]
A0A1Q2TU73_9SYNE5.870e-3945.03Rqc2 homolog RqcH n=3 Tax=unclassified Synechococc... [more]
A0A651DR26_9CYAN7.130e-3947.65Rqc2 homolog RqcH n=3 Tax=Cyanobacteria TaxID=1117... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05833FbpAcoord: 52..216
e-value: 3.7E-42
score: 144.6
NoneNo IPR availableGENE3D2.30.310.10coord: 50..216
e-value: 3.1E-33
score: 116.8
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 50..216
NoneNo IPR availablePANTHERPTHR15239:SF7coord: 50..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71796contigH-elongata_contig71796:167..1630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71796.14851.1mRNA_H-elongata_contig71796.14851.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71796 167..1640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71796.14851.1 ID=prot_H-elongata_contig71796.14851.1|Name=mRNA_H-elongata_contig71796.14851.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
MGVPESPGDSNGGVASSSSTGSNGDRGSDSGNADCIRSEKNLQPAQKLQA
VDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISW
HPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVI
SLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPT
KSVRPLSTGQPYQLPP
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