mRNA_H-elongata_contig71796.14851.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig71796.14851.1
Unique NamemRNA_H-elongata_contig71796.14851.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A6H5L2J2_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J2_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.360e-66
Identity = 114/170 (67.06%), Postives = 134/170 (78.82%), Query Frame = 2
Query:  191 RELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEG-GKETVAACAYQVSPTKSVRPLST-------------GQPYQLPP 658
            REL++++VP+RVE  YQ+  H++AL LRTLE N+WL +SWHPKGARCHVGG  PREKEQKAYTFSQTLR+ +RGLNI++V LARP ERV+ LD A RLDTP  +RLYVEIMASRSN +LVAV+E  G ET+AACAYQVSP+KSVRPLST             GQ Y LPP
Sbjct:    3 RELEQSIVPARVENAYQMDAHNLALQLRTLEGNIWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIRGLNIISVGLARPMERVVRLDLAPRLDTPATFRLYVEIMASRSNVVLVAVDEASGSETIAACAYQVSPSKSVRPLSTERLADLSVLPPLAGQAYVLPP 172          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: D8LSX7_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX7_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 1.250e-63
Identity = 107/144 (74.31%), Postives = 123/144 (85.42%), Query Frame = 2
Query:  230 TVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEG-GKETVAACAYQVSPTKSVRPLSTGQPYQLPP 658
            T++++  H+VAL LRTLE NMWL +SWHPKGARCHVGG  PREKEQKAYTFSQTLR+ + GLNIV+V LARP ERV+ LD A RLDTP  +RLYVEIMASRSN +LVAV+E  G ET+AACAYQVSP+KSVRPLSTGQ Y+LPP
Sbjct:   27 TLHEMDAHNVALQLRTLEGNMWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIWGLNIVSVGLARPMERVVRLDLAPRLDTPSTFRLYVEIMASRSNVVLVAVDEASGSETIAACAYQVSPSKSVRPLSTGQAYELPP 170          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A835YY55_9STRA (Fibronectin-binding protein A N-terminus-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY55_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.810e-41
Identity = 64/118 (54.24%), Postives = 88/118 (74.58%), Query Frame = 2
Query:  152 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYR 505
            LQ+VDFTT LL+ REL   +VP+RVE  +Q+   ++A+ LR +E + WL ISWHP+GARCH+G  PP+ KEQ++Y+FSQ LR LL+GL +V+V LA PFERV++  FA RL   P ++
Sbjct:    1 LQSVDFTTALLMTRELANAIVPARVENAFQIDAFNLAIGLRMVEGSEWLNISWHPQGARCHIGPAPPKGKEQQSYSFSQQLRTLLKGLTLVSVALAAPFERVVAFSFAQRLTDAPTHK 118          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A0G4ENT6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ENT6_VITBC)

HSP 1 Score: 154 bits (390), Expect = 6.450e-40
Identity = 80/174 (45.98%), Postives = 109/174 (62.64%), Query Frame = 2
Query:  137 QPAQKLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKSVRPLSTGQPYQLPP 658
            QP  K Q VDFTT LL  REL  ++VPS V + +QL   ++ L L TL    WL + W  K AR  +G  PP+ KE   ++FS  +R  L+GL + A+ L +PF R++ + FA RL   P ++L+VE+   RSN ILV+ +     ++AACAYQV  ++SVRPL TGQ YQLPP
Sbjct:   74 QPKAKKQTVDFTTLLLSCRELNASLVPSSVSSAFQLDDSNLLLGLTTLSGTRWLHLCWDAKAARLALGENPPK-KEILPFSFSHNIRLALKGLTLTAISLPQPFNRIVEMTFAPRLGRDPFFKLFVEVQGPRSNVILVSADTN---SIAACAYQVGASRSVRPLQTGQLYQLPP 243          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: UPI001A0787B3 (NFACT family protein n=1 Tax=Pseudanabaenaceae cyanobacterium LEGE 13415 TaxID=2777976 RepID=UPI001A0787B3)

HSP 1 Score: 144 bits (364), Expect = 9.660e-40
Identity = 78/170 (45.88%), Postives = 106/170 (62.35%), Query Frame = 2
Query:  152 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 658
            +Q VD+TT + +  EL+   +P+R E  YQ     V L+LRTL++  WL +SWHP+ AR H+  PPPR+ +   +TFSQ LR  L GL +V ++   P+ER I L FA R   P  + LY+EIM   SNAILV  E      +   A+QVS ++S VRP+ TGQPY+LPP
Sbjct:    1 MQPVDYTTLMAICAELRSQWLPARFEQAYQCDRFTVLLALRTLKKRGWLALSWHPQAARIHMSDPPPRDPD--TFTFSQQLRHQLGGLALVDIQPVSPWERAIDLQFAHRPGEPALWHLYIEIMGQYSNAILVNQENA----IVTAAHQVSSSQSSVRPIQTGQPYELPP 164          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: B1XM13_SYNP2 (Rqc2 homolog RqcH n=12 Tax=Synechococcus TaxID=1129 RepID=B1XM13_SYNP2)

HSP 1 Score: 152 bits (383), Expect = 2.300e-39
Identity = 79/171 (46.20%), Postives = 109/171 (63.74%), Query Frame = 2
Query:  149 KLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 658
            K+QAVD+TT + LV ELQR  VP+R+E VYQ     + L+LRTLE+  WL +SWHP+ AR H+G  PPR+ +   +TFS  LR L++G  ++ +EL +P+ERV+   F  R    P + LYVEIM   SN IL   ++     +   A Q+S  +S VRP+ TGQPY+ PP
Sbjct:    2 KIQAVDYTTLVALVTELQRDWVPARLEQVYQYDKQTLCLALRTLEKREWLWLSWHPQAARMHLGDRPPRDPD--TFTFSDQLRHLIKGSALLGIELIQPWERVVDFQFGRRPGEVPQWHLYVEIMGKHSNVILANADQ----QIVTTAQQISGDRSTVRPVQTGQPYEFPP 166          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: D8G6G5_9CYAN (Rqc2 homolog RqcH n=2 Tax=Microcoleaceae TaxID=1892252 RepID=D8G6G5_9CYAN)

HSP 1 Score: 152 bits (383), Expect = 2.440e-39
Identity = 84/170 (49.41%), Postives = 107/170 (62.94%), Query Frame = 2
Query:  152 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 658
            +Q VDFTT +    EL+   +P+R+E VYQ   H VAL+LRT+ R  WL ISWHP+GAR  +G PPPR  +   +TFSQ LR  L  L +VA+    P+ERVI L FA R   P  + LYVEIM+  SN IL   +      +  CA+QVS  +S VRP+ TGQPY+LPP
Sbjct:    4 VQPVDFTTLMAACCELRSDWLPARLEQVYQRDRHTVALALRTINRRGWLDISWHPQGARLCIGSPPPRTPD--TFTFSQQLRHQLGSLALVAIAQVAPWERVIDLQFARRPGEPALWHLYVEIMSKYSNVILTTQDN----LIVTCAHQVSAQQSSVRPIQTGQPYELPP 167          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: K9PVM5_9CYAN (Rqc2 homolog RqcH n=2 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9PVM5_9CYAN)

HSP 1 Score: 150 bits (380), Expect = 5.930e-39
Identity = 75/170 (44.12%), Postives = 109/170 (64.12%), Query Frame = 2
Query:  149 KLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKSVRPLSTGQPYQLPP 658
            K+QAVD+TT + LV EL++  VP+++E VYQ     + L+LRTL++  WL ISWHP+ AR H+G  PPR+ +   +TFS+ LR L++G  ++ +E  +P+ERV+ L F +R   P  + LYVEIM   SN IL    +  ++ +       S   SVRP+ TGQPYQ+PP
Sbjct:    2 KIQAVDYTTLVALVAELRQDWVPAKLEQVYQYDKQTICLALRTLKKRDWLWISWHPQAARIHMGDRPPRDPD--TFTFSEQLRHLIKGSALIGLEFIQPWERVVDLQFGTRPGDPAKFHLYVEIMGKHSNVILT---DADQKIITTAQQITSDRSSVRPVETGQPYQVPP 166          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A1Q2TU73_9SYNE (Rqc2 homolog RqcH n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A1Q2TU73_9SYNE)

HSP 1 Score: 150 bits (380), Expect = 6.490e-39
Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 2
Query:  149 KLQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 658
            K+QAVD+TT + +V ELQ+  VP+R+E VYQ     + L+LRTLE+  WL +SWHP+ AR H+G  PPR+ +   +TFS  LR L++G  ++ + L +P+ERV+   F  R   PP + LYVEIM   SN IL   ++     +   A Q+S  +S VRP+ TGQPY+ PP
Sbjct:    2 KIQAVDYTTLVAVVTELQQDWVPARLEQVYQYDKQTLCLALRTLEKREWLWLSWHPQAARLHLGDRPPRDPD--TFTFSDQLRHLIKGSALLGIALIQPWERVVDFQFGDRPGEPPQWHLYVEIMGKHSNVILANADQ----QIVTTAQQISGDRSAVRPVQTGQPYEFPP 166          
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Match: A0A651DR26_9CYAN (Rqc2 homolog RqcH n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A651DR26_9CYAN)

HSP 1 Score: 150 bits (379), Expect = 7.880e-39
Identity = 81/170 (47.65%), Postives = 108/170 (63.53%), Query Frame = 2
Query:  152 LQAVDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISWHPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVISLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPTKS-VRPLSTGQPYQLPP 658
            +Q VD TT   +  EL+   +P+R+E VYQ   H V+L+LRTLE   WL I WHP+ A   +GGPPPR  +   +TFSQ L+  L GL ++AV+L  P+ERV+   FA R   PP + LYVEIM   SNAIL   ++    T+   A+QVS  +S VRP+ TGQPY++PP
Sbjct:    1 MQPVDLTTLTAVCAELRDGWLPARLEQVYQRDRHMVSLALRTLEGRSWLNICWHPQAAHLCLGGPPPRTPD--TFTFSQQLKHQLGGLALIAVDLIHPWERVVDFQFAQRPGEPPLWHLYVEIMGKYSNAILTHADQ----TIVTAAHQVSRQQSSVRPIQTGQPYEMPP 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71796.14851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2J2_9PHAE1.360e-6667.06NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX7_ECTSI1.250e-6374.31NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YY55_9STRA5.810e-4154.24Fibronectin-binding protein A N-terminus-domain-co... [more]
A0A0G4ENT6_VITBC6.450e-4045.98Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
UPI001A0787B39.660e-4045.88NFACT family protein n=1 Tax=Pseudanabaenaceae cya... [more]
B1XM13_SYNP22.300e-3946.20Rqc2 homolog RqcH n=12 Tax=Synechococcus TaxID=112... [more]
D8G6G5_9CYAN2.440e-3949.41Rqc2 homolog RqcH n=2 Tax=Microcoleaceae TaxID=189... [more]
K9PVM5_9CYAN5.930e-3944.12Rqc2 homolog RqcH n=2 Tax=Leptolyngbya sp. PCC 737... [more]
A0A1Q2TU73_9SYNE6.490e-3945.03Rqc2 homolog RqcH n=3 Tax=unclassified Synechococc... [more]
A0A651DR26_9CYAN7.880e-3947.65Rqc2 homolog RqcH n=3 Tax=Cyanobacteria TaxID=1117... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71796contigH-elongata_contig71796:167..1640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.9
Seed ortholog evalue1.1e-54
Seed eggNOG ortholog2880.D8LSX7
EggNOG free text desc.Domain of unknown function (DUF814)
EggNOG OGs2S3BZ@2759,COG1293@1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF814
Ec32 orthologEc-26_001800.1
Exons3
Model size658
Cds size648
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71796.14851.1prot_H-elongata_contig71796.14851.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig71796 167..1630 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931118.7852485-CDS-H-elongata_contig71796:166..2261622931118.7852485-CDS-H-elongata_contig71796:166..226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71796 167..226 -
1691679705.9396503-CDS-H-elongata_contig71796:166..2261691679705.9396503-CDS-H-elongata_contig71796:166..226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71796 167..226 -
1622931118.8079321-CDS-H-elongata_contig71796:579..6731622931118.8079321-CDS-H-elongata_contig71796:579..673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71796 580..673 -
1691679705.9500813-CDS-H-elongata_contig71796:579..6731691679705.9500813-CDS-H-elongata_contig71796:579..673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71796 580..673 -
1622931118.8277926-CDS-H-elongata_contig71796:1136..16301622931118.8277926-CDS-H-elongata_contig71796:1136..1630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71796 1137..1630 -
1691679705.9585865-CDS-H-elongata_contig71796:1136..16301691679705.9585865-CDS-H-elongata_contig71796:1136..1630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71796 1137..1630 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931118.854212-UTR-H-elongata_contig71796:1630..16401622931118.854212-UTR-H-elongata_contig71796:1630..1640Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig71796 1631..1640 -
1691679705.9670851-UTR-H-elongata_contig71796:1630..16401691679705.9670851-UTR-H-elongata_contig71796:1630..1640Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig71796 1631..1640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig71796.14851.1

>prot_H-elongata_contig71796.14851.1 ID=prot_H-elongata_contig71796.14851.1|Name=mRNA_H-elongata_contig71796.14851.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
MGVPESPGDSNGGVASSSSTGSNGDRGSDSGNADCIRSEKNLQPAQKLQA
VDFTTTLLLVRELQRTVVPSRVETVYQLGPHDVALSLRTLERNMWLRISW
HPKGARCHVGGPPPREKEQKAYTFSQTLRALLRGLNIVAVELARPFERVI
SLDFASRLDTPPAYRLYVEIMASRSNAILVAVEEGGKETVAACAYQVSPT
KSVRPLSTGQPYQLPP
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mRNA from alignment at H-elongata_contig71796:167..1640-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig71796.14851.1 ID=mRNA_H-elongata_contig71796.14851.1|Name=mRNA_H-elongata_contig71796.14851.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1474bp|location=Sequence derived from alignment at H-elongata_contig71796:167..1640- (Himanthalia elongata Himel1 dioecious)
CGGGCACCTTATGGGCGTGCCCGAGAGCCCTGGCGACAGTAACGGAGGAG TCGCAAGCAGCAGCAGCACAGGCAGCAACGGCGACCGCGGTAGCGATAGC GGCAACGCCGACTGTATACGTTCAGAAAAAAATCTCCAACCTGCGCAAAA GCTCCAAGCGGTGGACTTCACCACGACACTTTTACTCGTCAGAGAGCTGC AACGGACAGTCGTACCCTCTCGGGTAGAGACCGTGTATCAGCTGGGTCCT CACGACGTCGCACTCAGCCTCCGAACCCTCGAAAGGAATATGTGGCTGCG CATTTCCTGGCACCCCAAAGGCGCGCGCTGTCACGTAGGTGGGCCGCCAC CCAGGGAAAAGGAGCAGAAGGCGTACACCTTCTCACAAACGCTGAGAGCT CTGCTTCGAGGCCTCAACATCGTGGCCGTCGAGCTGGCGCGACCCTTCGA GCGTGTGATCTCCTTGGACTTCGCTTCGCGCTTAGACACGCCCCCCGCGT ACAGGTGCAGCATCCTCGCAAGATCGTCCGTGCACATACCCTAGGAGCGA GCCACGTAGCGGCTAGGCTTACGAGTGCAGTACTCGTGACAAAACAACAG GTTGTATCACGCCGTTCGCCTACCCTCTGGTCTCCCTGTCCGTATTGGTG AGCAGCTTCCATATGTCTTTTTTTTTCAGCTCTTTTCCCAGCGCAGGGCT CGAGAAACCGCCGTAGTTGAAGGCCGTACACGAAACGTTACACACAAAAT TGTGTTCCAAAATCCGAGCAAGGCGTTCGCGACCTCGATCTATTCGCTAG CTCAGAAGTGATGAAGATGAAAGAATCGGCCATTCGATTACCAATATCAG GTGAAGTATCGTATTACAGATCGATCGGGTCTCGATTTTCCTAATCCCGC GCGACCCCACTTGCCCCTGACGTTTCGTCCCCCCCCCATCCCCCGCCCCT TCTTTTCGTTTCGTCAGGTTGTACGTGGAGATAATGGCGAGCAGATCCAA CGCTATCCTCGTAGCGGTAGAGGAGGGAGGGAAAGAAACGGTGGCAGCGT GTGCCTACCAGGTAAGTAATCGGGCCGGGCTGTGGCTGAGACTGGGATCG CGTATACCGCATTACGGTGCACGTTGGAGCATCGTATTATATGTACGCGT TGCTCAAACTTCCTCTCAATTAAGCCCCCTCCGTGTCAACATCGAAGAGA GAAATTATATTTTGGTTGGATCGATAGCACCCCAGGGCACATCCCCTCCT CGGCCATGGTAGTTCAGTAAAATTGTGTGATTCAAGGTATACAGGCCGAA TGATCCCGGCCGCCATAATCACTCCGACCTCCTGTAATGTGCGGGCTTGC CGGGGGTGAGATAGCGCACGCTCGGCATAACACATTCGCTTGATACAAAC ACTCGCCATCTCAGGTCAGTCCAACGAAGTCTGTACGACCGCTTTCCACC GGACAGCCCTACCAACTCCCCCCT
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Coding sequence (CDS) from alignment at H-elongata_contig71796:167..1640-

>mRNA_H-elongata_contig71796.14851.1 ID=mRNA_H-elongata_contig71796.14851.1|Name=mRNA_H-elongata_contig71796.14851.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig71796:167..1640- (Himanthalia elongata Himel1 dioecious)
ATGGGCGTGCCCGAGAGCCCTGGCGACAGTAACGGAGGAGTCGCAAGCAG
CAGCAGCACAGGCAGCAACGGCGACCGCGGTAGCGATAGCGGCAACGCCG
ACTGTATACGTTCAGAAAAAAATCTCCAACCTGCGCAAAAGCTCCAAGCG
GTGGACTTCACCACGACACTTTTACTCGTCAGAGAGCTGCAACGGACAGT
CGTACCCTCTCGGGTAGAGACCGTGTATCAGCTGGGTCCTCACGACGTCG
CACTCAGCCTCCGAACCCTCGAAAGGAATATGTGGCTGCGCATTTCCTGG
CACCCCAAAGGCGCGCGCTGTCACGTAGGTGGGCCGCCACCCAGGGAAAA
GGAGCAGAAGGCGTACACCTTCTCACAAACGCTGAGAGCTCTGCTTCGAG
GCCTCAACATCGTGGCCGTCGAGCTGGCGCGACCCTTCGAGCGTGTGATC
TCCTTGGACTTCGCTTCGCGCTTAGACACGCCCCCCGCGTACAGATGGGC
GTGCCCGAGAGCCCTGGCGACAGTAACGGAGGAGTCGCAAGCAGCAGCAG
CACAGGCAGCAACGGCGACCGCGGTAGCGATAGCGGCAACGCCGACTGTA
TACGTTCAGAAAAAAATCTCCAACCTGCGCAAAAGCTCCAAGCGGTGGAC
TTCACCACGACACTTTTACTCGTCAGAGAGCTGCAACGGACAGTCGTACC
CTCTCGGGTAGAGACCGTGTATCAGCTGGGTCCTCACGACGTCGCACTCA
GCCTCCGAACCCTCGAAAGGAATATGTGGCTGCGCATTTCCTGGCACCCC
AAAGGCGCGCGCTGTCACGTAGGTGGGCCGCCACCCAGGGAAAAGGAGCA
GAAGGCGTACACCTTCTCACAAACGCTGAGAGCTCTGCTTCGAGGCCTCA
ACATCGTGGCCGTCGAGCTGGCGCGACCCTTCGAGCGTGTGATCTCCTTG
GACTTCGCTTCGCGCTTAGACACGCCCCCCGCGTACAGGTTGTACGTGGA
GATAATGGCGAGCAGATCCAACGCTATCCTCGTAGCGGTAGAGGAGGGAG
GGAAAGAAACGGTGGCAGCGTGTGCCTACCAGGTTGTACGTGGAGATAAT
GGCGAGCAGATCCAACGCTATCCTCGTAGCGGTAGAGGAGGGAGGGAAAG
AAACGGTGGCAGCGTGTGCCTACCAGGTCAGTCCAACGAAGTCTGTACGA
CCGCTTTCCACCGGACAGCCCTACCAACTCCCCCCTGTCAGTCCAACGAA
GTCTGTACGACCGCTTTCCACCGGACAGCCCTACCAACTCCCCCCT
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