prot_H-elongata_contig71757.14849.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71757.14849.1
Unique Nameprot_H-elongata_contig71757.14849.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: D8LKA1_ECTSI (eIF-2B GDP-GTP exchange factor subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA1_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.170e-17
Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTG 42
            GHPLDNLLLEIKSYKFAQNREFK+CMRPAVE VLD+AGA TG
Sbjct:  485 GHPLDNLLLEIKSYKFAQNREFKECMRPAVELVLDLAGADTG 526          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: A0A835YX04_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX04_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.250e-12
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAG 40
            GHP+DNLLLEIK YKFAQNR F +C+R + EAVLD+AG G
Sbjct:  579 GHPIDNLLLEIKGYKFAQNRSFAECIRASTEAVLDLAGCG 618          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: A0A484EBE6_BRELC (W2 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBE6_BRELC)

HSP 1 Score: 50.1 bits (118), Expect = 7.470e-6
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTGQ 43
            GH +D+L +EIKS+KFAQNR F + +   V  +LD+   G GQ
Sbjct:  452 GHNVDDLFMEIKSFKFAQNRSFAEVIEAIVPGLLDLVPTGNGQ 494          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: A0A662X097_9STRA (W2 domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X097_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 7.470e-6
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTGQ 43
            GH +D+L +EIKS+KFAQNR F + +   V  +LD+  AG GQ
Sbjct:  298 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIVPGLLDLVPAGHGQ 340          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: A0A3R7J8W0_9STRA (W2 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8W0_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.400e-5
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTGQ 43
            GH +D+L +EIKS+KFAQNR F + +   V  +LD+  +G GQ
Sbjct:  582 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIVPGLLDLIPSGNGQ 624          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: A0A2P4YLK1_9STRA (Translation initiation factor eIF-2B subunit epsilon n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLK1_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 1.910e-5
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTGQ 43
            GH +D+L +EIKS+KFAQNR F + +   V  +LD+   G GQ
Sbjct:  278 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIVPGLLDLIPTGNGQ 320          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: A0A4D9CXC6_9STRA (W2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXC6_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.620e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    2 HPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIA 37
            H + NLLLEIKS+KFAQNR +   MR  V A+LD+A
Sbjct:  621 HAISNLLLEIKSFKFAQNRSYAAVMRAVVPALLDLA 656          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: V9FXQ7_PHYPR (W2 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=V9FXQ7_PHYPR)

HSP 1 Score: 48.5 bits (114), Expect = 2.620e-5
Identity = 20/43 (46.51%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTGQ 43
            GH +D+L +EIKS+KFAQNR F + +   +  +LD+   G GQ
Sbjct:  572 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIIPGLLDLIPTGNGQ 614          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: A0A0P1AK76_PLAHL (Translation initiation factor eif-2b subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK76_PLAHL)

HSP 1 Score: 48.5 bits (114), Expect = 2.620e-5
Identity = 20/43 (46.51%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTGQ 43
            GH +D+L +EIKS+KFAQNR F + +   +  +LD+   G GQ
Sbjct:  522 GHNVDDLFMEIKSFKFAQNRSFAEVIGAIIPGLLDLVPTGIGQ 564          
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Match: K8ZBZ7_NANGC (Translation initiation factor eIF-2B subunit epsilon n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBZ7_NANGC)

HSP 1 Score: 48.5 bits (114), Expect = 2.620e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    2 HPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIA 37
            H + NLLLEIKS+KFAQNR +   MR  V A+LD+A
Sbjct:  521 HAISNLLLEIKSFKFAQNRSYAAVMRAVVPALLDLA 556          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71757.14849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LKA1_ECTSI1.170e-1790.48eIF-2B GDP-GTP exchange factor subunit epsilon n=2... [more]
A0A835YX04_9STRA2.250e-1272.50eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A484EBE6_BRELC7.470e-648.84W2 domain-containing protein n=1 Tax=Bremia lactuc... [more]
A0A662X097_9STRA7.470e-651.16W2 domain-containing protein (Fragment) n=2 Tax=No... [more]
A0A3R7J8W0_9STRA1.400e-548.84W2 domain-containing protein n=4 Tax=Phytophthora ... [more]
A0A2P4YLK1_9STRA1.910e-548.84Translation initiation factor eIF-2B subunit epsil... [more]
A0A4D9CXC6_9STRA2.620e-561.11W2 domain-containing protein n=2 Tax=Monodopsidace... [more]
V9FXQ7_PHYPR2.620e-546.51W2 domain-containing protein n=14 Tax=Phytophthora... [more]
A0A0P1AK76_PLAHL2.620e-546.51Translation initiation factor eif-2b subunit n=1 T... [more]
K8ZBZ7_NANGC2.620e-561.11Translation initiation factor eIF-2B subunit epsil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..43
e-value: 1.1E-7
score: 33.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71757contigH-elongata_contig71757:2608..2736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71757.14849.1mRNA_H-elongata_contig71757.14849.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71757 2608..2736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71757.14849.1 ID=prot_H-elongata_contig71757.14849.1|Name=mRNA_H-elongata_contig71757.14849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
GHPLDNLLLEIKSYKFAQNREFKDCMRPAVEAVLDIAGAGTGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016021MIF4-like_sf