prot_H-elongata_contig71633.14834.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig71633.14834.1
Unique Name	prot_H-elongata_contig71633.14834.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	261

Homology

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BLAST of mRNA_H-elongata_contig71633.14834.1 vs. uniprot
Match: D7FZW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZW1_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.300e-114
Identity = 177/269 (65.80%), Postives = 213/269 (79.18%), Query Frame = 0

Query:    1 SYYQARQTASTTVNLTATAYYLAGKTY-----NSLETRYVWPAPYDLDEEERQALETAAREGGDDCESVEDCVGGIIGWIGGVVGADTCVGVEVPCPDIDATNTLVEYEASQMSIDLFGNSTAI---AYNTTLAQTALDQATDAITELVRRINFASSIYVIYLAFLVVVTPPFIVYGARWKHRVVDLLANVNKPMWIALIVLVWYAQEFFKSIITSSLYSVLWANFLRDPCWADPDFLTNTSMVISNTCKDITSAQNLFNQASANYRYY 261
            +YY AR TAS  VN+TATAY+ A +TY     N+L   + WP+PYDL+EE+RQ LET AREGGDDCE VE+CVGG+ G+ G +VG  TCV  EVPCPDI++T  LVEY+ASQ ++DLFGN+       Y  TLAQ+ALD AT AI+ LVRRINFASSIYV+YL F V+V PPFIVYGA+W  R+ ++L+NVNKPMWIALIVLVWY  E F+SII SSLY+++W+NFL+DPCWADP+FL NTSMVIS TC +I SA NLFNQA ANYRYY
Sbjct:  107 NYYNARATASLAVNITATAYFKAAETYTGEGLNALGLAFEWPSPYDLNEEQRQELETEAREGGDDCEPVEECVGGVAGFFGDIVGETTCVETEVPCPDIESTELLVEYDASQQALDLFGNNITAYDEEYAETLAQSALDDATSAISVLVRRINFASSIYVLYLVFTVLVPPPFIVYGAKWNVRIFEVLSNVNKPMWIALIVLVWYGHELFQSIINSSLYNIIWSNFLQDPCWADPEFLVNTSMVISETCTEIISASNLFNQAGANYRYY 375

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BLAST of mRNA_H-elongata_contig71633.14834.1 vs. uniprot
Match: A0A7S4ILM4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ILM4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.270e-7
Identity = 31/130 (23.85%), Postives = 68/130 (52.31%), Query Frame = 0

Query:  131 DQATDAITELVRRINFASSIYVIYLAFLVVVTPPFIVYGARWKHRVVDLLANVNKPMWIALIVLVWYAQEFFKSIITSSLYSVLWANFLRDPCWADPDFLTNTSMVISNTCKDITSAQN---LFNQASAN 257
            ++  + IT LVR+++ AS++YV+Y+   +    P  ++ + +      ++    K ++I ++++ W+  ++ +S   S  + +     L DPC+AD +FL N S  +   C ++   ++   L N A+ N
Sbjct:  136 EKGEEVITTLVRQVDIASTLYVVYVCVSLFFPSPVYIFRSNYVVAAKRIVFGAQKHVFILVVLVFWWGLKYLQSFRVSLEFQLYMQKLLSDPCYADAEFLANASKALDVACDELLPMESEWKLMNSATRN 265

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig71633.14834.1 vs. uniprot

BLAST of mRNA_H-elongata_contig71633.14834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FZW1_ECTSI	1.300e-114	65.80	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S4ILM4_9STRA	3.270e-7	23.85	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 212..261
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 188..211
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..149
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 150..168
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 169..187
None	No IPR available	TMHMM	TMhelix		coord: 150..172
None	No IPR available	TMHMM	TMhelix		coord: 187..206

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig71633	contig	H-elongata_contig71633:436..3130 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig71633.14834.1	mRNA_H-elongata_contig71633.14834.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig71633 436..3130 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig71633.14834.1 ID=prot_H-elongata_contig71633.14834.1|Name=mRNA_H-elongata_contig71633.14834.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp
SYYQARQTASTTVNLTATAYYLAGKTYNSLETRYVWPAPYDLDEEERQAL
ETAAREGGDDCESVEDCVGGIIGWIGGVVGADTCVGVEVPCPDIDATNTL
VEYEASQMSIDLFGNSTAIAYNTTLAQTALDQATDAITELVRRINFASSI
YVIYLAFLVVVTPPFIVYGARWKHRVVDLLANVNKPMWIALIVLVWYAQE
FFKSIITSSLYSVLWANFLRDPCWADPDFLTNTSMVISNTCKDITSAQNL
FNQASANYRYY