prot_H-elongata_contig71565.14826.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71565.14826.1
Unique Nameprot_H-elongata_contig71565.14826.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length255
Homology
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A6H5KQK5_9PHAE (PSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQK5_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 9.450e-104
Identity = 209/258 (81.01%), Postives = 225/258 (87.21%), Query Frame = 0
Query:    1 KVEHVVDNEAVLENAEMDQAYVQEFRQIFERFAKIADEASGAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEE---GVGPRLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELRE 255
            +VE+V DN +VL+ AEMD A ++EF+QIFER                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     G GPRLSRK RKLK+RLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPF+LP+FIAMTGIDK+RAA+EEADS KKAKQKQRERV PKMGKIDIDYQVLHDAFFK+QTKPPLT PGDLYYEGKEFEA+N+EHKPG IS +LRE
Sbjct:  123 QVEYVADNTSVLDGAEMDAASLEEFKQIFERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGPRLSRKARKLKSRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSQKKAKQKQRERVAPKMGKIDIDYQVLHDAFFKHQTKPPLTNPGDLYYEGKEFEAKNQEHKPGHISSDLRE 380          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A836CFT2_9STRA (Proline-rich spliceosome-associated family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT2_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.190e-83
Identity = 185/255 (72.55%), Postives = 210/255 (82.35%), Query Frame = 0
Query:    1 KVEHVVDNEA-VLENAEMDQAYVQEFRQIFERFAKIADEASGAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVGPRLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELR 254
            +VE+V  + + ++E + MD    +EF++IFERF+KI      A  D AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XX      +LSRK RKLK+RL+VAELKQLVQRPDVVEAHDVTAADPRMLV LKSYRNTVPVPRHWC KRKYLQGKRGIEK PF+LP+FIAMTGI K+R  V+EAD  K+AKQ+ RERVQPKMGKIDIDYQVLHDAFFK+QTKP +T  GDLY+EGKEFE R +E KPG +S ELR
Sbjct:   55 EVEYVAPSASDLVEGSGMDDEVAKEFKEIFERFSKIGR----AEEDIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEXXXXXGAGKLSRKARKLKSRLTVAELKQLVQRPDVVEAHDVTAADPRMLVHLKSYRNTVPVPRHWCHKRKYLQGKRGIEKKPFELPEFIAMTGISKLRDNVDEADG-KRAKQRSRERVQPKMGKIDIDYQVLHDAFFKWQTKPHMTSVGDLYFEGKEFEVRLREKKPGQLSEELR 304          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A7S3XPZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPZ4_HETAK)

HSP 1 Score: 263 bits (673), Expect = 9.860e-83
Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 0
Query:   87 PRLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELRE 255
            PRLSRKQRK  +RLSVAELKQLVQRP+VVEAHDVTAADPR+LV LK+YR TVPVPRHWC KRKYLQGKRG+EK P+QLPDFIA TGI K+R A EE D++K+AKQKQRERVQPKMGKIDIDYQVLHDAFFK+QTKP +T  G+LYYEGKEFE R ++  PG +S  LRE
Sbjct:   17 PRLSRKQRKKLHRLSVAELKQLVQRPEVVEAHDVTAADPRLLVHLKAYRGTVPVPRHWCHKRKYLQGKRGVEKQPWQLPDFIAQTGISKLRGAQEELDAMKRAKQKQRERVQPKMGKIDIDYQVLHDAFFKWQTKPRMTTHGELYYEGKEFEVRLRDKMPGALSQPLRE 185          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A7S2W121_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W121_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.600e-80
Identity = 151/237 (63.71%), Postives = 176/237 (74.26%), Query Frame = 0
Query:   18 DQAYVQEFRQIFERFAKIADEASGAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVGPRLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELR 254
            D   + +F+ IFE+FA  A+E +G +A AA        XXXXXXXXX                 EEG   +LSRK RK ++RLSVAELKQLV RPDVVEAHD+TAADPR+LVFLK YRNTVPVPRHWC KRKYLQGKRGIEK PFQLP+FIA TGI+K+R A+ E ++L  AKQK R RVQPKMGKIDIDYQVLHDAFFKYQ KP LT  GD+YYEGKEFE + +E KPG ++ +L+
Sbjct:   52 DDPLMSQFKGIFEKFAS-AEELTGESAVAAANGAEAEEXXXXXXXXXTADAAGQDAE-------EEGGEVKLSRKARKKQSRLSVAELKQLVGRPDVVEAHDITAADPRLLVFLKGYRNTVPVPRHWCHKRKYLQGKRGIEKPPFQLPEFIASTGIEKIRTAIMEQEALASAKQKGRGRVQPKMGKIDIDYQVLHDAFFKYQNKPSLTLHGDIYYEGKEFEVKLREKKPGLLTEQLK 280          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A833QN24_9POAL (Proline-rich spliceosome-associated family protein isoform 2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QN24_9POAL)

HSP 1 Score: 252 bits (643), Expect = 1.950e-80
Identity = 167/255 (65.49%), Postives = 201/255 (78.82%), Query Frame = 0
Query:    1 KVEHVVDNEAVLENAEMDQAYVQEFRQIFERFAKIADEASGAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVGPRLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELRE 255
            KV+  V+ E V E AE+D +++++F+ +FE+F+   + A  +  DA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +S K+RKL+ R+ +AELKQ+  +PDVVE  DVTA+DP++LV LKSYRNTVPVPRHWCQKRK+LQGKRGIEK PFQLPDFIA TGI+K+R A  E +  KK KQKQRER+QPKMGK+DIDYQVLHDAFFKYQTKP LT  GDLYYEGKEFE + +E KPG +S EL+E
Sbjct:   17 KVDLSVEVEYVPEKAEVDASFLEDFKSVFEKFS-FKETAPISEEDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----------VSNKKRKLQRRMKIAELKQICSKPDVVEVWDVTASDPKLLVSLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERIQPKMGKMDIDYQVLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSKELKE 259          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A7S2Y464_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y464_9STRA)

HSP 1 Score: 255 bits (651), Expect = 7.510e-79
Identity = 127/167 (76.05%), Postives = 145/167 (86.83%), Query Frame = 0
Query:   88 RLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELR 254
            +LSRK RK  NRLSVAELKQLVQRPDVVEAHDVTAADPR+LVFLK++RNTV VPRHW  KRKYLQGKRGI+K PF LPDFIA TGI+K+R +VEE D++K+AKQ+ RERV PKMGKIDIDYQVLHDAFFK+QTKP LTR GDLYYEGKEFE    E +PG ++ +L+
Sbjct:  184 KLSRKARKRLNRLSVAELKQLVQRPDVVEAHDVTAADPRLLVFLKAHRNTVAVPRHWSHKRKYLQGKRGIDKKPFALPDFIAQTGIEKIRNSVEELDAMKRAKQRMRERVNPKMGKIDIDYQVLHDAFFKWQTKPSLTRHGDLYYEGKEFEVNYAEKRPGVLTDDLK 350          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A7I8K3I0_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K3I0_SPIIN)

HSP 1 Score: 256 bits (654), Expect = 2.060e-78
Identity = 140/255 (54.90%), Postives = 176/255 (69.02%), Query Frame = 0
Query:    1 KVEHVVDNEAVLENAEMDQAYVQEFRQIFERFAKIADEASGAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVGPRLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELRE 255
            KVE  ++ E V E AE++  ++++F+++FE+F+  +D   GA  +A                                   E+GV    S K++KL+ R+ +AELKQ+  +PDVVE  D TAADP++LVFLKSYRNTVPVPRHWCQKRK+LQGKRGIEK PFQLPDFIA TGI+K+R A  E +  KK KQKQRER+QPKMGK+DIDYQVLHDAFFKYQTKP LT  GDLY+EGKEFE + +E KPG +S EL+E
Sbjct:   81 KVEEKIEVEYVPEKAEIEDTFLEDFKKVFEKFS-FSDSVPGAEDNAKNVEAANAVARQEAKSDSDEEEQDNQMK-------EKGV----SNKKKKLQRRMKIAELKQISSKPDVVEIWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGTLSHELKE 323          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: UPI0018AF00F4 (splicing factor 3B subunit 2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF00F4)

HSP 1 Score: 255 bits (651), Expect = 4.770e-78
Identity = 158/255 (61.96%), Postives = 189/255 (74.12%), Query Frame = 0
Query:    1 KVEHVVDNEAVLENAEMDQAYVQEFRQIFERFAKIADEASGAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVGPRLSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELRE 255
            +VE  V+ E V E AE+D  +++EF+ + E+F  I+ +AS  A D A             XXXXXXXXXXXXXXXX     ++G+    S K++KL  R+ +A+LKQ+  RPDVVE  D TAADPR+LVFLKSYRNTVPVPRHW QKRK+LQGKRGIEK PFQLPDFIA TGI+K+R A  E +  KK KQKQRER+QPKMGK+DIDYQVLHDAFFKYQTKP LT  GDLYYEGKEFE + +E KPG +S EL+E
Sbjct:   66 EVEVAVEIEYVPEKAEIDDDFLEEFKHVLEKF--ISKDASAGAEDDAKKDEAAENTGQKKXXXXXXXXXXXXXXXXK----DKGI----SNKKKKLLRRMKIADLKQICSRPDVVEVWDATAADPRLLVFLKSYRNTVPVPRHWSQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSKELKE 310          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A2P2L7W2_RHIMU (Pliceosome associated family protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2L7W2_RHIMU)

HSP 1 Score: 248 bits (633), Expect = 6.100e-78
Identity = 123/167 (73.65%), Postives = 141/167 (84.43%), Query Frame = 0
Query:   89 LSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELRE 255
            LS K++KL  R+ +AELKQ+  RPDVVE  D TAADP++LVFLKSYRNTVPVPRHWCQKRK+LQGKRGIEK PFQLPDFIA TGI+K+R A  E +  KK KQKQRER+QPKMGK+DIDYQVLHDAFFKYQTKP LT  GDLY+EGKEFE + +E KPG +S EL+E
Sbjct:  160 LSNKKKKLLRRMKIAELKQICSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYHEGKEFEVKLREMKPGSLSHELKE 326          
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Match: A0A803LLD4_CHEQI (PSP domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LLD4_CHEQI)

HSP 1 Score: 250 bits (638), Expect = 1.080e-77
Identity = 123/167 (73.65%), Postives = 142/167 (85.03%), Query Frame = 0
Query:   89 LSRKQRKLKNRLSVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPKMGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFISPELRE 255
            +S K++KL+ R+ +AELKQ+ +RPDVVE  D TA DP++LVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEK PFQLPDFIA TGI+K+R A  E +  KK KQKQRER+QPKMGK+DIDYQVLHDAFFKYQTKP LT  GDLYYEGKEFE + +E KPG +S EL+E
Sbjct:   93 ISNKKKKLQRRMKIAELKQICRRPDVVEIWDATAHDPKLLVFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSYGDLYYEGKEFEVKLREMKPGTLSKELKE 259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71565.14826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQK5_9PHAE9.450e-10481.01PSP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CFT2_9STRA2.190e-8372.55Proline-rich spliceosome-associated family protein... [more]
A0A7S3XPZ4_HETAK9.860e-8378.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2W121_9STRA1.600e-8063.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A833QN24_9POAL1.950e-8065.49Proline-rich spliceosome-associated family protein... [more]
A0A7S2Y464_9STRA7.510e-7976.05Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7I8K3I0_SPIIN2.060e-7854.90Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
UPI0018AF00F44.770e-7861.96splicing factor 3B subunit 2 n=1 Tax=Dioscorea cay... [more]
A0A2P2L7W2_RHIMU6.100e-7873.65Pliceosome associated family protein n=1 Tax=Rhizo... [more]
A0A803LLD4_CHEQI1.080e-7773.65PSP domain-containing protein n=1 Tax=Chenopodium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..196
NoneNo IPR availableCOILSCoilCoilcoord: 44..71
NoneNo IPR availablePANTHERPTHR12785:SF6SPLICING FACTOR 3B SUBUNIT 2coord: 5..255
NoneNo IPR availablePANTHERPTHR12785splicing factor 3Bcoord: 5..255
IPR007180Domain of unknown function DUF382PFAMPF04037DUF382coord: 110..236
e-value: 1.2E-57
score: 193.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71565contigH-elongata_contig71565:417..2616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71565.14826.1mRNA_H-elongata_contig71565.14826.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71565 417..2616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71565.14826.1 ID=prot_H-elongata_contig71565.14826.1|Name=mRNA_H-elongata_contig71565.14826.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=255bp
KVEHVVDNEAVLENAEMDQAYVQEFRQIFERFAKIADEASGAAADAAEAE
AEAAAAAAAAAEAEAEAARKKAGAGADMDSDEEGVGPRLSRKQRKLKNRL
SVAELKQLVQRPDVVEAHDVTAADPRMLVFLKSYRNTVPVPRHWCQKRKY
LQGKRGIEKTPFQLPDFIAMTGIDKVRAAVEEADSLKKAKQKQRERVQPK
MGKIDIDYQVLHDAFFKYQTKPPLTRPGDLYYEGKEFEARNKEHKPGFIS
PELRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007180DUF382