prot_H-elongata_contig71536.14823.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71536.14823.1
Unique Nameprot_H-elongata_contig71536.14823.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A6H5KQH0_9PHAE (Pep3_Vps18 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH0_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.580e-21
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    9 SALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            S+LL FIARP EER FDPMYALRLC+QHGRSLA VHLYSAMGLWEEAVDLAL
Sbjct: 1045 SSLLAFIARPPEERFFDPMYALRLCSQHGRSLACVHLYSAMGLWEEAVDLAL 1096          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A397UPW1_9GLOM (Pep3/Vps18/deep orange family-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UPW1_9GLOM)

HSP 1 Score: 66.6 bits (161), Expect = 2.280e-11
Identity = 30/58 (51.72%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    3 TSSKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            +S+   ++LL+F+AR  +E H++  YALR+C+Q+G++ + VH+YS MGL+EEAVDLAL
Sbjct:  705 SSNNDETSLLKFLAREGKEPHYNMDYALRICSQNGKTQSCVHIYSNMGLFEEAVDLAL 762          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A836CAW5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.110e-11
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:   11 LLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            LL+ +ARP E+R FD  YALR+CAQ GR  A V +Y+AMGL+EEAVDLAL
Sbjct:  851 LLDLLARPPEKRFFDLTYALRVCAQLGRRRARVAIYAAMGLYEEAVDLAL 900          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A1Y2XEG8_9PEZI (Pep3_Vps18 domain-containing protein n=9 Tax=Hypoxylaceae TaxID=2033035 RepID=A0A1Y2XEG8_9PEZI)

HSP 1 Score: 65.5 bits (158), Expect = 5.810e-11
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    5 SKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            SK  S LL ++    EE HFDP +ALRLC QH R+L+ VH+Y+ MG + +AVDLAL
Sbjct:  687 SKDESGLLAYLESQGEEPHFDPDFALRLCIQHKRTLSCVHIYTNMGQYVQAVDLAL 742          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A1X2IBI1_9FUNG (Pep3/Vps18/deep orange family-domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IBI1_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 7.950e-11
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 AVTSSKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            A+ S++  +ALL F+     E H++  YALRLC+Q+GR  + VH+YS MGL+EEAV+LAL
Sbjct:  748 AIQSTRDETALLAFLKNEGREMHYNLDYALRLCSQNGRMQSCVHIYSQMGLYEEAVNLAL 807          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A1V1TTX3_9FUNG (Pep3_Vps18 domain-containing protein n=3 Tax=Fungi TaxID=4751 RepID=A0A1V1TTX3_9FUNG)

HSP 1 Score: 64.3 bits (155), Expect = 1.480e-10
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    5 SKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            SK+ S LL ++    +E HFDP +ALRLC QH R+L+ VH+Y+ MG + +AVDLAL
Sbjct:  686 SKAESGLLAYLESQGDEPHFDPDFALRLCIQHKRTLSCVHIYTNMGQYIQAVDLAL 741          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A1Y2DIL4_9PEZI (Pep3/Vps18/deep orange family-domain-containing protein n=1 Tax=Pseudomassariella vexata TaxID=1141098 RepID=A0A1Y2DIL4_9PEZI)

HSP 1 Score: 64.3 bits (155), Expect = 1.480e-10
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    5 SKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            SK  SALL ++    EE  FDP +ALRLC QH R+L+ VH+Y+ MG + +AVDLAL
Sbjct:  688 SKDESALLSYLESQGEEPRFDPDFALRLCIQHKRTLSCVHIYTNMGQYVQAVDLAL 743          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A0F4ZLD2_9PEZI (Pep3_Vps18 domain-containing protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZLD2_9PEZI)

HSP 1 Score: 63.9 bits (154), Expect = 2.030e-10
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 AVTSSKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            A +SSK  SALL ++    EE  FDP +ALRLC +H R+L+ VH+Y+ MG + +AVDLAL
Sbjct:  690 ASSSSKDESALLAYLESQGEEPKFDPDFALRLCIEHHRTLSCVHIYTNMGQYLQAVDLAL 749          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A168M3R9_ABSGL (Pep3_Vps18 domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168M3R9_ABSGL)

HSP 1 Score: 63.9 bits (154), Expect = 2.030e-10
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 AVTSSKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            A+ S+   +ALL F+     + H++  YALRLC+Q+GRS + VH+YS MGL+EEAV LAL
Sbjct:  769 AIQSTPDETALLAFLKNEGRDMHYNLDYALRLCSQNGRSQSCVHIYSQMGLYEEAVTLAL 828          
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Match: A0A4Q4YUY2_9PEZI (Pep3_Vps18 domain-containing protein n=6 Tax=Monosporascus TaxID=155415 RepID=A0A4Q4YUY2_9PEZI)

HSP 1 Score: 63.5 bits (153), Expect = 2.770e-10
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    5 SKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMGLWEEAVDLAL 60
            SK  SALL ++    +E  +DP +ALRLC QH R+L+ VH+Y++MG + +AVDLAL
Sbjct:  686 SKDESALLSYLESQGDEPRYDPDFALRLCIQHKRTLSCVHIYTSMGQYPQAVDLAL 741          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71536.14823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQH0_9PHAE1.580e-2188.46Pep3_Vps18 domain-containing protein n=1 Tax=Ectoc... [more]
A0A397UPW1_9GLOM2.280e-1151.72Pep3/Vps18/deep orange family-domain-containing pr... [more]
A0A836CAW5_9STRA3.110e-1166.00Pep3_Vps18 domain-containing protein n=1 Tax=Tribo... [more]
A0A1Y2XEG8_9PEZI5.810e-1155.36Pep3_Vps18 domain-containing protein n=9 Tax=Hypox... [more]
A0A1X2IBI1_9FUNG7.950e-1151.67Pep3/Vps18/deep orange family-domain-containing pr... [more]
A0A1V1TTX3_9FUNG1.480e-1053.57Pep3_Vps18 domain-containing protein n=3 Tax=Fungi... [more]
A0A1Y2DIL4_9PEZI1.480e-1055.36Pep3/Vps18/deep orange family-domain-containing pr... [more]
A0A0F4ZLD2_9PEZI2.030e-1053.33Pep3_Vps18 domain-containing protein n=1 Tax=Thiel... [more]
A0A168M3R9_ABSGL2.030e-1051.67Pep3_Vps18 domain-containing protein n=1 Tax=Absid... [more]
A0A4Q4YUY2_9PEZI2.770e-1051.79Pep3_Vps18 domain-containing protein n=6 Tax=Monos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23323:SF26VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 18 HOMOLOGcoord: 8..60
NoneNo IPR availablePANTHERPTHR23323VACUOLAR MEMBRANE PROTEIN RELATEDcoord: 8..60
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPROSITEPS50236CHCRcoord: 1..60
score: 13.412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71536contigH-elongata_contig71536:185..364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71536.14823.1mRNA_H-elongata_contig71536.14823.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71536 185..364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71536.14823.1 ID=prot_H-elongata_contig71536.14823.1|Name=mRNA_H-elongata_contig71536.14823.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
AVTSSKSRSALLEFIARPSEERHFDPMYALRLCAQHGRSLAMVHLYSAMG
LWEEAVDLAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000547Clathrin_H-chain/VPS_repeat