prot_H-elongata_contig71522.14816.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71522.14816.1
Unique Nameprot_H-elongata_contig71522.14816.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: A0A8H3LT90_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3LT90_9GLOM)

HSP 1 Score: 68.6 bits (166), Expect = 1.180e-12
Identity = 31/52 (59.62%), Postives = 42/52 (80.77%), Query Frame = 0
Query:   30 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            FPN+ KL+++   +P SSVECERGFS QN+IK+KDRN L+   L++LMR+SL
Sbjct:   86 FPNIIKLIQIVYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMRVSL 137          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: UPI001C155DC1 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C155DC1)

HSP 1 Score: 66.2 bits (160), Expect = 5.050e-12
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   30 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            FPN+ KL++L   +P SSVECERGFS QN+IK+K RN L+ + L+ LMRISL
Sbjct:   56 FPNIIKLIQLVYCIPFSSVECERGFSRQNQIKTKSRNSLTTDTLDRLMRISL 107          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: C3Z810_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z810_BRAFL)

HSP 1 Score: 66.6 bits (161), Expect = 5.520e-11
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    1 LTREDRSEILQKLWVHFWRTVHGNPGGAHFPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            L RED +     +W    R VHG+     FPN+ KL  +  +LP  + +CERGFS QNRIK++ RN LS++RL++LMRI++
Sbjct:  289 LRREDDTLTTDTMWKELER-VHGSE---LFPNLLKLATVGRLLPMHTADCERGFSTQNRIKTRLRNALSVKRLDILMRIAI 365          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: A0A015J8B3_RHIIW (Uncharacterized protein n=13 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015J8B3_RHIIW)

HSP 1 Score: 65.5 bits (158), Expect = 1.360e-10
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   30 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            FPN+ KL+++   +P SSVECERGFS QN+IK+KDRN L+   L++LM ISL
Sbjct:  544 FPNIIKLIQIAYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMCISL 595          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: UPI001C19C353 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C19C353)

HSP 1 Score: 65.5 bits (158), Expect = 1.390e-10
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   30 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            FPN+ KL+++   +P SSVECERGFS QN+IK+KDRN L+   L++LM ISL
Sbjct:  614 FPNIIKLIQIAYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMCISL 665          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: A0A3B1J4P0_ASTMX (TTF-type domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J4P0_ASTMX)

HSP 1 Score: 63.9 bits (154), Expect = 4.760e-10
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    6 RSEILQKLWVHFWRTVHGN-PGGAHFPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRIS 80
            + + + K +   W  +    P  + F N++ L ++ +VLP S+ +CERGFSAQNRIKSK RN L++  +E L+RIS
Sbjct:  530 KGQFMDKSYSGLWEVMLSKEPYCSDFQNIFHLAEIMLVLPISAAQCERGFSAQNRIKSKVRNSLNVSTVEDLVRIS 605          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: A0A2Z6RJ54_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RJ54_9GLOM)

HSP 1 Score: 62.8 bits (151), Expect = 6.480e-10
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   30 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            F N+ KL++L   +P SSVECERGFS QN+IK+K+RN L+ + L+ LMRISL
Sbjct:  171 FLNIIKLIQLIYCIPFSSVECERGFSRQNQIKTKNRNSLTTDTLDRLMRISL 222          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: A0A535FQV7_9CHLR (HAT transposon family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535FQV7_9CHLR)

HSP 1 Score: 57.4 bits (137), Expect = 6.030e-9
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   35 KLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRIS 80
            +L ++  VLP +SVECERGFS  NRIK+ DRNRL  E LE LMRIS
Sbjct:    8 RLCQMVAVLPATSVECERGFSNLNRIKTDDRNRLQPEHLEYLMRIS 53          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: A0A8H3QWN6_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3QWN6_9GLOM)

HSP 1 Score: 59.3 bits (142), Expect = 8.020e-9
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   30 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            F N+ KL+++   +P SSVECE GFS QN+IK+KDRN L+   L+LLM + L
Sbjct:  128 FLNIIKLIQIVYCIPFSSVECEHGFSRQNKIKTKDRNSLATNMLDLLMHVFL 179          
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Match: UPI0011C0D78D (zinc finger protein 862-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C0D78D)

HSP 1 Score: 57.4 bits (137), Expect = 1.200e-8
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   24 NPGGAHFPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKDRNRLSIERLELLMRISL 81
            +P    + N+ +LV + +VLP S+ +CERGFSAQNRIK+  R+ L++   E LMRISL
Sbjct:   31 DPYKTDYRNILELVMIMLVLPISAAQCERGFSAQNRIKTSTRSSLAVSTTEDLMRISL 88          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71522.14816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H3LT90_9GLOM1.180e-1259.62Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
UPI001C155DC15.050e-1261.54Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
C3Z810_BRAFL5.520e-1145.68Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A015J8B3_RHIIW1.360e-1059.62Uncharacterized protein n=13 Tax=Rhizophagus irreg... [more]
UPI001C19C3531.390e-1059.62Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A3B1J4P0_ASTMX4.760e-1042.11TTF-type domain-containing protein n=1 Tax=Astyana... [more]
A0A2Z6RJ54_9GLOM6.480e-1059.62Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
A0A535FQV7_9CHLR6.030e-965.22HAT transposon family protein n=1 Tax=Chloroflexi ... [more]
A0A8H3QWN6_9GLOM8.020e-953.85Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
UPI0011C0D78D1.200e-850.00zinc finger protein 862-like n=1 Tax=Sparus aurata... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 26..77
e-value: 6.5E-9
score: 35.5
NoneNo IPR availablePANTHERPTHR46880FAMILY NOT NAMEDcoord: 21..81
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 16..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71522contigH-elongata_contig71522:1179..1421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71522.14816.1mRNA_H-elongata_contig71522.14816.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71522 1179..1421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71522.14816.1 ID=prot_H-elongata_contig71522.14816.1|Name=mRNA_H-elongata_contig71522.14816.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
LTREDRSEILQKLWVHFWRTVHGNPGGAHFPNVYKLVKLYIVLPHSSVEC
ERGFSAQNRIKSKDRNRLSIERLELLMRISL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf