prot_H-elongata_contig71498.14812.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71498.14812.1
Unique Nameprot_H-elongata_contig71498.14812.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig71498.14812.1 vs. uniprot
Match: D7G3J7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J7_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.120e-37
Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 0 
Query:    4 QRPHGCLDKTCESDCRRGFRCYTNQXXXXXVHPDLCHSNRGTVTCRCK-DGKIGNGHKCPGETPKIYKDANGNLLPLGLDASTVCGCQEPVLDLCHDVTCGKHASC 108
            +RP+GC DKTC  DCRR FRCYT+Q     V+PD C S+RG VTC C+ + ++GNGH CPGETP++  DA+G  L   LD S VCGCQ P +DLCHDV+CG+HA+C
Sbjct:  184 KRPNGCRDKTCSHDCRRDFRCYTDQCEGKCVYPDSCKSSRGMVTCACQNESEVGNGHVCPGETPEVLTDASGAFLA-DLDPSKVCGCQVPKVDLCHDVSCGQHATC 288
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71498.14812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3J7_ECTSI1.120e-3759.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71498contigH-elongata_contig71498:217..2374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71498.14812.1mRNA_H-elongata_contig71498.14812.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71498 217..2374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71498.14812.1 ID=prot_H-elongata_contig71498.14812.1|Name=mRNA_H-elongata_contig71498.14812.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MLRQRPHGCLDKTCESDCRRGFRCYTNQCEGKCVHPDLCHSNRGTVTCRC
KDGKIGNGHKCPGETPKIYKDANGNLLPLGLDASTVCGCQEPVLDLCHDV
TCGKHASC
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