prot_H-elongata_contig71493.14810.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71493.14810.1
Unique Nameprot_H-elongata_contig71493.14810.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig71493.14810.1 vs. uniprot
Match: D7FJR5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR5_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.350e-46
Identity = 83/119 (69.75%), Postives = 101/119 (84.87%), Query Frame = 0
Query:    1 MSFGSWKATLWFANAYYSKPAPESDILAVARLTAFLKQAVVGMFALGSGVFGVNALGMGIMAGIVAVGVVKGELDPSPGATASKTAPAGASAEEVDRVMLKEAEEKILRAQADIDRELG 119
            MSFGSWKATLW A AYYSKPA ESDILAVAR+T+F+KQAVVG+FALG+G+FGV ALGMG+MA IVAVGV KGELDPSP A+ SK A  GAS EE + +ML++A+E + +AQ +I+R +G
Sbjct:  145 MSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPEASGSKKAAPGASEEEKELLMLQQADESLRKAQEEIERNVG 263          
BLAST of mRNA_H-elongata_contig71493.14810.1 vs. uniprot
Match: A0A835ZBJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.080e-13
Identity = 48/120 (40.00%), Postives = 69/120 (57.50%), Query Frame = 0
Query:    1 MSFGSWKATLWFANAYY--SKPAPESDILAVARLTAFLKQAVVGMFALGSGVFGVNALGMGIMAGIVAVGVVKGELDPSPGATASKTAPAGASAEEVDRVMLKEAEEKILRAQADIDREL 118
            MS G+W+ T   A  Y   S+    SDILAV RLT  +KQ +VG+  L +GVFGV ALGM ++ G V +GVV GELDPS     + ++     A       L++ ++ + +A A+I  +L
Sbjct:  109 MSAGAWRLTNVLAGIYLVQSEKFANSDILAVQRLTGLMKQVIVGLGTLATGVFGVTALGMALLGGRVLMGVVSGELDPSKVDEKASSSRGRGPAPTAQEGELEDVKQLLAKADAEIAAQL 228          
BLAST of mRNA_H-elongata_contig71493.14810.1 vs. uniprot
Match: A0A7S1UHH8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHH8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.050e-7
Identity = 31/74 (41.89%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    1 MSFGSWKATLWFANAYYSKPAPESDILAVARLTAFLKQAVVGMFALGSGVFGVNALGMGIMAGIVAVGVVKGEL 74
            +S  +W+ T +  +AY      ESD     RL+  +KQ VVG+ +L +GVFGV ALG+G++   +AVG+ +GEL
Sbjct:   82 LSTVAWRFTTFSIDAYAKATPTESDFYLTNRLSGVMKQVVVGLGSLATGVFGVIALGLGLLGARIAVGISRGEL 155          
BLAST of mRNA_H-elongata_contig71493.14810.1 vs. uniprot
Match: A0A7S4B5P2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5P2_CHRCT)

HSP 1 Score: 55.5 bits (132), Expect = 1.510e-6
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    5 SWKATLWFANAYYSKPAPESDILAVARLTAFLKQAVVGMFALGSGVFGVNALGMGIMAGIVAVGVVKGELDPS 77
            +W+ T+     +   PA ES    V RLT   +  VV M ALG+GV G+ ++G   +A  VA+GV+KGELDP+
Sbjct:  167 AWQFTIAAGTYFAEHPAEESSFYVVNRLTGLARVVVVSMGALGAGVTGIASVGQAALAVQVAIGVMKGELDPT 239          
BLAST of mRNA_H-elongata_contig71493.14810.1 vs. uniprot
Match: A0A7S1D238_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D238_CYCTE)

HSP 1 Score: 54.7 bits (130), Expect = 2.180e-6
Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    1 MSFGSWKATLWFANAYYSKPAPESDILAVARLTAFLKQAVVGMFALGSGVFGVNALGMGIMAGIVAVGVVKGELDPSPGATASK 84
            M+ G W  T + A AY++     +DI  + R+    +  V+G+ +L SG FGV  +G+ ++AG VA GV+ GELDP+P   A+K
Sbjct:  123 MAAGLWFLTCFLA-AYFADHPANTDIYFIQRVAQVFRNLVMGLVSLASGFFGVIGMGILLLAGRVAYGVMDGELDPTPIKKAAK 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71493.14810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJR5_ECTSI1.350e-4669.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZBJ7_9STRA4.080e-1340.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UHH8_9STRA1.050e-741.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4B5P2_CHRCT1.510e-642.47Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1D238_CYCTE2.180e-639.29Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021434Protein of unknown function DUF3082PFAMPF11282DUF3082coord: 1..62
e-value: 1.1E-11
score: 44.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..70
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71493contigH-elongata_contig71493:956..2489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71493.14810.1mRNA_H-elongata_contig71493.14810.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71493 437..3106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71493.14810.1 ID=prot_H-elongata_contig71493.14810.1|Name=mRNA_H-elongata_contig71493.14810.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MSFGSWKATLWFANAYYSKPAPESDILAVARLTAFLKQAVVGMFALGSGV
FGVNALGMGIMAGIVAVGVVKGELDPSPGATASKTAPAGASAEEVDRVML
KEAEEKILRAQADIDRELGGKTRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021434DUF3082