prot_H-elongata_contig7124.14784.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7124.14784.1
Unique Nameprot_H-elongata_contig7124.14784.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: D7FQ99_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ99_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 8.340e-48
Identity = 81/96 (84.38%), Postives = 86/96 (89.58%), Query Frame = 0
Query:    1 AHSVQVAPVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTASG 96
            A + QVAPVPSSGIEKLETDTFKLQSFQTLTG KFVITAEAGTPDLG VL EIYELYTDYVLK   NPFYELEMPIRCELFT +LE+LIERH+ +G
Sbjct:   44 AIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLK---NPFYELEMPIRCELFTLYLEELIERHSNAG 136          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: A0A835ZDL6_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL6_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.380e-38
Identity = 68/95 (71.58%), Postives = 78/95 (82.11%), Query Frame = 0
Query:    1 AHSVQVAPVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTAS 95
            A + QVAP+ SSGIEKLET T++L+  QTLTGAKFVITA+  TP+L  VL  IYELYTDYVLK   NPFYELEMPIRCELFT HLEKL+ER+ A+
Sbjct:   44 AIAAQVAPIASSGIEKLETATYRLRCLQTLTGAKFVITAQPNTPELEVVLQGIYELYTDYVLK---NPFYELEMPIRCELFTQHLEKLVERYNAA 135          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: K8Z5G7_NANGC (Trafficking protein particle complex subunit (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z5G7_NANGC)

HSP 1 Score: 123 bits (308), Expect = 6.510e-34
Identity = 63/94 (67.02%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    2 HSV--QVAPVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHT 93
            HS+  QVAP+ SSGIEKLE D  KLQ FQ+ TG KFV+TAE GTPDL  VLH IYELY DYVLK   NPFYE++MPIRC+LF   +E+LIER++
Sbjct:   46 HSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLK---NPFYEMDMPIRCDLFQQGVERLIERNS 136          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: A0A7S2RJT7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.700e-32
Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    5 QVAPVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTASGTPGAKG 102
            Q+APV SSGIEKLETD+F L+ FQ  TG KFVITAEAGT DL  VL  +Y+ YTDYVLK   NPFYELEMPIRCELFT  + ++I+ H   G+   KG
Sbjct:   48 QIAPVVSSGIEKLETDSFVLRCFQPPTGIKFVITAEAGTQDLEVVLQRVYQAYTDYVLK---NPFYELEMPIRCELFTEAIARVIQSH---GSQTGKG 139          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: K3WRL1_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL1_GLOUD)

HSP 1 Score: 114 bits (284), Expect = 2.940e-30
Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    1 AHSVQVAPVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTASGT 97
            A +V  +PV S GIE LETDTF+LQ FQT TG KF +TA  GTPDL AVL  +YELY DYVLK   NPFYELEMPIRC LF   L+  +++  A  +
Sbjct:   44 AIAVLASPVASGGIETLETDTFRLQCFQTPTGLKFFLTAALGTPDLDAVLRTVYELYVDYVLK---NPFYELEMPIRCSLFNSGLKTFVDKFNADSS 137          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: A0A2D4CAE8_PYTIN (Trafficking protein particle complex subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAE8_PYTIN)

HSP 1 Score: 112 bits (280), Expect = 1.190e-29
Identity = 59/94 (62.77%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    1 AHSVQVAPVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTA 94
            A +V  APV S GIE LETDTF+LQ FQT TG KF ITA  GTPDL   L  IYELY DYVLK   NPFYELEMPIRC LF   L+  +++  A
Sbjct:   44 AIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLK---NPFYELEMPIRCSLFNAGLKSFVDKFNA 134          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: F0WDB3_9STRA (Trafficking protein particle complex subunit n=3 Tax=Albugo TaxID=65356 RepID=F0WDB3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.990e-27
Identity = 54/85 (63.53%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    7 APVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIER 91
            APV S GI  LETDTF+LQ FQTLTG KF ITA+ GT D+   L  IYELY DYVLK   NPFYELEMPIRC LF   L+  +++
Sbjct:   50 APVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLK---NPFYELEMPIRCTLFNAGLKLFVDK 131          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: A0A1S3DR24_DIACI (Trafficking protein particle complex subunit n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DR24_DIACI)

HSP 1 Score: 105 bits (262), Expect = 9.280e-27
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    5 QVAPVP-SSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTASG 96
            Q++P P SSGIE LE DTFKL  +QTLTG KF+I  +     L  +L +IYELY DY LK   NPFY LEMPIRCELF  HL+ L+++H  +G
Sbjct:   68 QLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYADYALK---NPFYSLEMPIRCELFDTHLQNLLQQHEKTG 157          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: A0A1E3QCW2_LIPST (Trafficking protein particle complex subunit n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QCW2_LIPST)

HSP 1 Score: 103 bits (257), Expect = 2.600e-26
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    5 QVAPVPSS-GIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLI 89
            Q++PVPSS GIE LET+TF+LQ FQTLTG KF++ +E    +  AVL  IYELY DYV+K   NPFY++EMP+RCELF  HL   I
Sbjct:   49 QISPVPSSSGIEVLETETFRLQCFQTLTGTKFLLISEPRQQNTDAVLRRIYELYADYVIK---NPFYQIEMPVRCELFDRHLATYI 131          
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Match: A0A1S3DFX5_DIACI (Trafficking protein particle complex subunit n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DFX5_DIACI)

HSP 1 Score: 105 bits (262), Expect = 3.830e-26
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    5 QVAPVP-SSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVLHEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTASG 96
            Q++P P SSGIE LE DTFKL  +QTLTG KF+I  +     L  +L +IYELY DY LK   NPFY LEMPIRCELF  HL+ L+++H  +G
Sbjct:  124 QLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYADYALK---NPFYSLEMPIRCELFDTHLQNLLQQHEKTG 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7124.14784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ99_ECTSI8.340e-4884.38Trafficking protein particle complex subunit n=2 T... [more]
A0A835ZDL6_9STRA1.380e-3871.58Trafficking protein particle complex subunit n=1 T... [more]
K8Z5G7_NANGC6.510e-3467.02Trafficking protein particle complex subunit (Frag... [more]
A0A7S2RJT7_9STRA1.700e-3264.29Trafficking protein particle complex subunit n=1 T... [more]
K3WRL1_GLOUD2.940e-3059.79Trafficking protein particle complex subunit n=1 T... [more]
A0A2D4CAE8_PYTIN1.190e-2962.77Trafficking protein particle complex subunit n=2 T... [more]
F0WDB3_9STRA5.990e-2763.53Trafficking protein particle complex subunit n=3 T... [more]
A0A1S3DR24_DIACI9.280e-2756.99Trafficking protein particle complex subunit n=1 T... [more]
A0A1E3QCW2_LIPST2.600e-2660.47Trafficking protein particle complex subunit n=1 T... [more]
A0A1S3DFX5_DIACI3.830e-2656.99Trafficking protein particle complex subunit n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 2..92
e-value: 1.3E-19
score: 81.2
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 11..91
e-value: 1.5E-28
score: 99.5
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249SYNBINDINcoord: 3..93
NoneNo IPR availableGENE3D3.30.450.70coord: 1..97
e-value: 1.4E-28
score: 101.5
NoneNo IPR availablePANTHERPTHR23249:SF15TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4coord: 3..93
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 11..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7124contigH-elongata_contig7124:9344..9947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7124.14784.1mRNA_H-elongata_contig7124.14784.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7124 9344..9947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7124.14784.1 ID=prot_H-elongata_contig7124.14784.1|Name=mRNA_H-elongata_contig7124.14784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
AHSVQVAPVPSSGIEKLETDTFKLQSFQTLTGAKFVITAEAGTPDLGAVL
HEIYELYTDYVLKACTNPFYELEMPIRCELFTHHLEKLIERHTASGTPGA
KG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007233TRAPPC
IPR011012Longin-like_dom_sf