prot_H-elongata_contig7109.14770.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.190e-25 Identity = 70/192 (36.46%), Postives = 100/192 (52.08%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +ADPCVFR++VD V +IV Y ++ILV + + +D E L L F K+L E ++ GC I R+ K TL Q Y ++ KRF V S IP G+ + K +E++ P REA+G++MWV+T ++PD+SF + + HW A K L Y
Sbjct: 919 QSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVAVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKRFDVQSTSRIPATPGVDLVPK-------REDEEGGEWPRREAIGSMMWVSTFSLPDVSFAVRAVARHAHAPAKRHWDAIQKTLGY 1102
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5K616_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K616_9PHAE) HSP 1 Score: 109 bits (273), Expect = 2.280e-25 Identity = 70/192 (36.46%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +AD CVFR++ D VV +IV Y ++ILV + + +D E L L F K+L E E+ GC I R +A TL Q Y +++ KRF S+IP + G+ + PK ++++N P REA+G++MWV+T + PD+SF + HW A K L Y
Sbjct: 71 QSGRQWGYHAADTLVENGFEQCKADTCVFRKMADEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERGVEAGTLRISQTAYIDSMVKRFEAQSTSLIPASPGV-----DLGPK--RDDENGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAHHAHAPAKRHWDAIQKILGY 254
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE) HSP 1 Score: 112 bits (279), Expect = 4.110e-25 Identity = 69/177 (38.98%), Postives = 98/177 (55.37%), Query Frame = 0
Query: 17 EKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F K+L E E+ GC I R+ +A TL Q Y +++ +RF V S IP G + PK +E++ P REA+G++MWV+T + PD+SF + + HW A K L Y
Sbjct: 842 ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKMFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVVRHAHAPAKRHWDAIQKILGY 1010
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE) HSP 1 Score: 110 bits (275), Expect = 6.640e-25 Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 0
Query: 17 EKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F K+L E ++ GC I R+ +A TL Q Y +++ +RF V S IP G + PK +E++ P REA+G++MWV+T + PD+SF + + HW A K L Y
Sbjct: 192 ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGY 360
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 111 bits (277), Expect = 7.050e-25 Identity = 72/192 (37.50%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F K+L E ++ GC I R+ + TL Q Y +++ KRF V S IP + G+ K D +EK P REA+G++MWV+T + PD+SF + + HW A K L Y
Sbjct: 444 QSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRD------DEKGGEW-PVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGY 627
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE) HSP 1 Score: 111 bits (277), Expect = 7.240e-25 Identity = 70/192 (36.46%), Postives = 103/192 (53.65%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F +++ E E+ GC I R+ +A L Q Y +++ KRF V S IP + G+ + PK ++ +N P REA+G++MWV+T + PD+SF + + HW A K L Y
Sbjct: 620 QSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGV-----DLGPK--RDNENGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGY 803
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 111 bits (277), Expect = 7.580e-25 Identity = 71/192 (36.98%), Postives = 102/192 (53.12%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F K+L E ++ GC I R+ +A TL Q Y +++ +RF V S IP G + PK +E++ P REA+G++MWV+T + PD+SF + + HW A K L Y
Sbjct: 890 QSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGY 1073
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 111 bits (277), Expect = 7.580e-25 Identity = 71/192 (36.98%), Postives = 103/192 (53.65%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F K+L E ++ GC I R+ +A TL Q Y +++ +RF V S IP G + PK +E++ P R+A+G++MWV+T + PD+SF A + + HW A K L Y
Sbjct: 999 QSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGY 1182
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 111 bits (277), Expect = 7.780e-25 Identity = 71/192 (36.98%), Postives = 102/192 (53.12%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F K+L E ++ GC I R+ +A TL Q Y +++ +RF V S IP G + PK +E++ P REA+G++MWV+T + PD+SF + + HW A K L Y
Sbjct: 1269 QSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGY 1452
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 111 bits (277), Expect = 7.810e-25 Identity = 71/192 (36.98%), Postives = 102/192 (53.12%), Query Frame = 0
Query: 2 QSRLCWFRIFTGGIKEKGFEQSRADPCVFRRIVDVKVVTVIVAYANNILVISKAKKDDERTLLDLGLCFKIKDLAEAEFCVGCQITRNRKARTLTFHQQVYAETVAKRFSVTKASMIPMATGMKPLSKEDSPKIPKEEKNISCIPSREAVGALMWVATMTIPDISFTAYNLDKLCDDLGPVHWKAAIKALQY 193
QS W + E GFEQ +ADPCVFR++VD VV +IV Y ++ILV + + +D E L L F K+L E ++ GC I R+ +A TL Q Y +++ +RF V S IP G + PK +E++ P REA+G++MWV+T + PD+SF + + HW A K L Y
Sbjct: 1289 QSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGY 1472 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7109.14770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig7109.14770.1 ID=prot_H-elongata_contig7109.14770.1|Name=mRNA_H-elongata_contig7109.14770.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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