prot_H-elongata_contig70945.14752.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70945.14752.1
Unique Nameprot_H-elongata_contig70945.14752.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length200
Homology
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A7XNE6_9TELE (DNA helicase (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7XNE6_9TELE)

HSP 1 Score: 130 bits (326), Expect = 2.380e-31
Identity = 86/218 (39.45%), Postives = 119/218 (54.59%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLS-EWVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FN SVA EA+R FP NV+C+T +S+A+  VG +RYK          S NF        Y+ AK V+ T++ +  S D  ++ +H+          +T+IDP + E   Q A+  W +MK +  N  S +   M+H G +KL+QL++ +   L   YDVI LDEAQD    I +V+  Q    CG ILVGDPHQ IY FRGA + +T    T    LTQ
Sbjct:  494 FNNSVASEARRRFPSNVDCKTAHSLAYYDVG-WRYKPKMTANLKPFSINFALPAGRGGYIKAKVVATTLSAFMASTDPTISTRHVPMDHITHRGQRTIIDPENQELFAQDAKAIWDKMKDI--NEKSKRAYYMTHDGYMKLWQLSKPK-RRLSDRYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAINALTTASHTHIFYLTQ 704          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A8UCG5_NOTFU (DNA helicase (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8UCG5_NOTFU)

HSP 1 Score: 126 bits (317), Expect = 1.500e-30
Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSEWVL-QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FN SVA EA+R FP NV+C+T++S+A++ VG +RYK          S NF        +V AK ++ T++ +  S D  ++ +H+          +T+ID  ++ +  Q A+  W +M  +  N  S +   M+H G +KL+QL++ +   L  +YDVI LDEAQD    I +V+  Q    CG ILVGDPHQ IY FRGA + +T    T    LTQ
Sbjct:  134 FNSSVASEARRRFPSNVDCKTVHSLAYRDVG-WRYKPKMTPNLYPFSINFALPAGRGGFVRAKVIATTLSAFMASADPTISTRHVPFDYVTHKGRRTVIDSENQQLFAQDAQTIWGKMTDI--NEKSKRAYYMTHDGYMKLWQLSKPK-RRLSDQYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAVNALTTASHTHIFYLTQ 344          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: UPI001FAD100B (F-box DNA helicase 1 isoform X1 n=3 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAD100B)

HSP 1 Score: 127 bits (319), Expect = 2.070e-30
Identity = 84/220 (38.18%), Postives = 117/220 (53.18%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA---------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSE-WVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FN SVA EA+R FP NV+CRT +S+A+  VG  RYK            S NF   T    +  AK V+  +N +  S D+ +  +H+          + +I+P  + + +Q A+  W +MK + +   S Q   M H G LKL+QL   + P L  +YD I +DEAQD    I +V+  Q   GCG ILVGDPHQ IY F+GA + + + R T    LTQ
Sbjct:  498 FNNSVACEARRRFPANVDCRTAHSLAYNDVGR-RYKVHKKLTFNVKPFSINFALPTGAAGFCRAKVVTTILNTFMASADQTIDSQHVPYDYVINKGCRKVIEPEEQKFFIQEAKAIWNKMKDVKEK--SKQAYYMPHDGYLKLWQLRNPK-PRLSDQYDAIFIDEAQDCTPAIMDVLLSQ---GCGKILVGDPHQQIYTFKGAVNALHSVRHTHIFYLTQ 710          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A8URJ7_NOTFU (DNA helicase n=4 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8URJ7_NOTFU)

HSP 1 Score: 126 bits (317), Expect = 3.220e-30
Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSEWVL-QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FN SVA EA+R FP NV+C+T++S+A++ VG +RYK          S NF        +V AK ++ T++ +  S D  ++ +H+          +T+ID  ++ +  Q A+  W +M  +  N  S +   M+H G +KL+QL++ +   L  +YDVI LDEAQD    I +V+  Q    CG ILVGDPHQ IY FRGA + +T    T    LTQ
Sbjct:  134 FNSSVASEARRRFPSNVDCKTVHSLAYRDVG-WRYKPKMTPNLYPFSINFALPAGRGGFVRAKVIATTLSAFMASADPTISTRHVPFDYVTHKGRRTVIDSENQQLFAQDAQTIWGKMTDI--NEKSKRAYYMTHDGYMKLWQLSKPK-RRLSDQYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAVNALTTASHTHIFYLTQ 344          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A8HT58_NOTKU (DNA helicase n=10 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8HT58_NOTKU)

HSP 1 Score: 126 bits (317), Expect = 3.830e-30
Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSEWVL-QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FN SVA EA+R FP NV+C+T++S+A++ VG +RYK          S NF        +V AK ++ T++ +  S D  ++ +H+          +T+ID  ++ +  Q A+  W +M  +  N  S +   M+H+G +KL+QL+  +   L  +YDVI LDEAQD    I +V+  Q    CG ILVGDPHQ IY FRGA + +T    T    LTQ
Sbjct:  492 FNSSVASEARRRFPSNVDCKTVHSLAYRDVG-WRYKPKMTPNLYPFSINFALPAGRGGFVRAKVIATTLSAFMASADPTISTRHVPFDYVTHKGRRTVIDSENQQLFAQDAQTIWGKMTDI--NEKSKRAYYMTHNGYMKLWQLSNPK-RRLSDQYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAVNALTTASHTHIFYLTQ 702          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A3B4UQ30_SERDU (DNA helicase n=4 Tax=Seriola TaxID=8160 RepID=A0A3B4UQ30_SERDU)

HSP 1 Score: 125 bits (314), Expect = 9.610e-30
Identity = 82/219 (37.44%), Postives = 116/219 (52.97%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGG-FRYKTDASWNFTCTTKYVRYVD-------AKDVSDTMNRYWNSRDEDMTEKHI-----------KTLIDPLSEWVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FNKSVA EA R FPRNV+C+T++S+A+K VG  + Y+   + N    T      D       AK V+ T+N +  S D+ +T +H+           K + D      +  A++ W +MK L  N  + +   M+H G LKL+QL   + P L  +YDV+ +DEAQD    I +V+  Q    CG ILVGDPHQ IY F+GA + +     T    LTQ
Sbjct:  447 FNKSVAFEAARRFPRNVDCKTVHSLAFKDVGKRYHYRKKLTANLKAFTINAVLPDGRGGFTKAKVVTTTLNTFMASADQTITTRHVPSTHVTNNGFRKDIDDGEKRLFVHDAQMIWNKMKDL--NETNKEAYSMTHDGYLKLWQLQNPK-PRLSDKYDVLFIDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFKGAVNALQIVDHTHIFYLTQ 659          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A6I9P370_9TELE (DNA helicase n=4 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9P370_9TELE)

HSP 1 Score: 125 bits (314), Expect = 9.660e-30
Identity = 87/218 (39.91%), Postives = 116/218 (53.21%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWN---FTCTTKYVR----YVDAKDVSDTMNRYWNSRDEDMTEKHI-----------KTLIDPLSEWVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FNKSVA EAQR FP NV C+T++S+A+  VG  RY+    +N   FT ++        +  AK V+ T+N +  S DE +   H+           K + D   E  +Q AR  W +MK L K    S  L M+H G LKL+QL +   P L  +YDV+ +DEAQD    I +V+  Q    CG ILVGDPHQ IY F+GA + +     T    LTQ
Sbjct:  491 FNKSVATEAQRRFPSNVACKTVHSLAFTDVGR-RYRQKLIFNMKPFTISSVLPPGRGGFAKAKVVTTTLNAFKASTDECINISHVPMSRMGKNGRRKIITDYERELFVQDARKIWIKMKDLTKT--KSDDLPMTHDGYLKLWQLQR---PCLSDQYDVLFIDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFKGAVNALHIVDHTHIFYLTQ 699          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A4W6F9Z3_LATCA (DNA helicase n=2 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6F9Z3_LATCA)

HSP 1 Score: 125 bits (314), Expect = 9.690e-30
Identity = 86/219 (39.27%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVG-GFRYKTDASWN---FTCTTKYVR----YVDAKDVSDTMNRYWNSRDEDMTEKHI------KT---LIDPLSEWVL--QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FNKSVA EAQR FPRNV+C+T++S+A++ +G  + ++   +WN   FT ++        +V AK V  T+N +  S DE +T +H+      KT   +   ++E  L  Q A++ W +MK L  N    +   M+H G LKL+QL + R P L  +YDVI +DE+QD    I +V+  Q    C  ILVGDPHQ IY F+GA + +     T    LTQ
Sbjct:  510 FNKSVACEAQRRFPRNVDCKTVHSLAYRDIGLKYHFRRKLTWNLKPFTISSVLPEGRGGFVKAKVVITTLNAFMASTDEHITIEHVPFAHVTKTGNRMGINIAERPLFVQDAQMIWNKMKDL--NETKIEAYHMTHDGYLKLWQLQEPR-PCLSDKYDVIFIDESQDCTPAIMDVLLSQR---CAKILVGDPHQQIYTFKGAVNALNVVDHTHIYYLTQ 722          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A8C7EHL3_NOTPE (DNA helicase n=2 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C7EHL3_NOTPE)

HSP 1 Score: 125 bits (313), Expect = 1.310e-29
Identity = 82/223 (36.77%), Postives = 123/223 (55.16%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWNFTCTTKYV------------RYVDAKDVSDTMNRYWNSRDEDMTEKHIKT----------LIDPLSEWV-LQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FNK+VAE  +R FPRNV C+T +S+A++ VG  RYK     NF+  + +             +Y+  K V +T+  ++ S DE+++E+H+ T          L+ P  + + +Q A+  W  MK L  +  + +  ++++ G LKL+QL++   P L   YD I +DEAQD    I +VV  Q+   CGVILVGDPHQ IY FRGA + +     T    LTQ
Sbjct:  476 FNKAVAERGKRVFPRNVTCKTFHSLAYESVGK-RYKEKGKLNFSSLSAFSVSFLIQHREGQSQYIRGKTVKETLENFFASSDEEISEEHVPTWFKNTHGIRKLVSPEEKRINVQEAKEIWYHMKKLDGD--AEKNYKITYDGYLKLWQLSK---PQLTG-YDAIFVDEAQDCTPAIVDVVLSQS---CGVILVGDPHQQIYTFRGAVNTLYTVPHTHVYYLTQ 688          
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A3Q1HGC9_ANATE (DNA helicase n=2 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1HGC9_ANATE)

HSP 1 Score: 124 bits (310), Expect = 3.320e-29
Identity = 83/218 (38.07%), Postives = 117/218 (53.67%), Query Frame = 0
Query:    1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWN---FTCTTKYVR----YVDAKDVSDTMNRYWNSRDEDMTEKHIKTL----------IDPLSEWV-LQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 200
            FNKSVA EAQR FPRNV+C+T++S+A+  VG +RY+   ++N   FT  +        +  AK V+ T+N +  S D  +T +H+ +           ID   + + +  A+  W +MK L  N        ++H G LKL+QL Q   P L  +Y V+ +DEAQD    I NV+  Q    CG ILVGDPHQ IY F+GA + +     T    LTQ
Sbjct:  483 FNKSVANEAQRRFPRNVDCKTVHSLAYSSVG-WRYRKKLTFNLKPFTINSVLPEGRGGFTKAKVVTTTLNTFMASADPTITTRHVPSTHVSNSGNRQHIDECEKLLFVHDAQKIWNKMKDL--NETDEDAYHLTHDGYLKLWQLQQ---PCLSDQYHVLFIDEAQDCTPAIMNVMLSQR---CGKILVGDPHQQIYTFKGAVNALQIVDHTHIYYLTQ 691          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1A7XNE6_9TELE2.380e-3139.45DNA helicase (Fragment) n=1 Tax=Iconisemion striat... [more]
A0A1A8UCG5_NOTFU1.500e-3037.61DNA helicase (Fragment) n=1 Tax=Nothobranchius fur... [more]
UPI001FAD100B2.070e-3038.18F-box DNA helicase 1 isoform X1 n=3 Tax=Girardinic... [more]
A0A1A8URJ7_NOTFU3.220e-3037.61DNA helicase n=4 Tax=Nothobranchius TaxID=28779 Re... [more]
A0A1A8HT58_NOTKU3.830e-3037.61DNA helicase n=10 Tax=Nothobranchius TaxID=28779 R... [more]
A0A3B4UQ30_SERDU9.610e-3037.44DNA helicase n=4 Tax=Seriola TaxID=8160 RepID=A0A3... [more]
A0A6I9P370_9TELE9.660e-3039.91DNA helicase n=4 Tax=Notothenioidei TaxID=8205 Rep... [more]
A0A4W6F9Z3_LATCA9.690e-3039.27DNA helicase n=2 Tax=Lates calcarifer TaxID=8187 R... [more]
A0A8C7EHL3_NOTPE1.310e-2936.77DNA helicase n=2 Tax=Nothoprocta perdicaria TaxID=... [more]
A0A3Q1HGC9_ANATE3.320e-2938.07DNA helicase n=2 Tax=Anabas testudineus TaxID=6414... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034739UvrD/AddA helicase, N-terminalPFAMPF00580UvrD-helicasecoord: 120..187
e-value: 1.6E-13
score: 50.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..194
e-value: 5.7E-18
score: 67.8
NoneNo IPR availablePANTHERPTHR11070:SF30F-BOX DNA HELICASE 1coord: 1..200
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 1..200
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70945contigH-elongata_contig70945:248..1212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70945.14752.1mRNA_H-elongata_contig70945.14752.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70945 248..1212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70945.14752.1 ID=prot_H-elongata_contig70945.14752.1|Name=mRNA_H-elongata_contig70945.14752.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp
FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWNFTCTTKYV
RYVDAKDVSDTMNRYWNSRDEDMTEKHIKTLIDPLSEWVLQGARLAWARM
KVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSN
DCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034739UvrD/AddA_N
IPR000212DNA_helicase_UvrD/REP
IPR027417P-loop_NTPase