mRNA_H-elongata_contig70945.14752.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A7XNE6_9TELE (DNA helicase (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7XNE6_9TELE) HSP 1 Score: 130 bits (326), Expect = 2.380e-31 Identity = 86/218 (39.45%), Postives = 119/218 (54.59%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLS-EWVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FN SVA EA+R FP NV+C+T +S+A+ VG +RYK S NF Y+ AK V+ T++ + S D ++ +H+ +T+IDP + E Q A+ W +MK + N S + M+H G +KL+QL++ + L YDVI LDEAQD I +V+ Q CG ILVGDPHQ IY FRGA + +T T LTQ
Sbjct: 494 FNNSVASEARRRFPSNVDCKTAHSLAYYDVG-WRYKPKMTANLKPFSINFALPAGRGGYIKAKVVATTLSAFMASTDPTISTRHVPMDHITHRGQRTIIDPENQELFAQDAKAIWDKMKDI--NEKSKRAYYMTHDGYMKLWQLSKPK-RRLSDRYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAINALTTASHTHIFYLTQ 704
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A8UCG5_NOTFU (DNA helicase (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8UCG5_NOTFU) HSP 1 Score: 126 bits (317), Expect = 1.500e-30 Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSEWVL-QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FN SVA EA+R FP NV+C+T++S+A++ VG +RYK S NF +V AK ++ T++ + S D ++ +H+ +T+ID ++ + Q A+ W +M + N S + M+H G +KL+QL++ + L +YDVI LDEAQD I +V+ Q CG ILVGDPHQ IY FRGA + +T T LTQ
Sbjct: 134 FNSSVASEARRRFPSNVDCKTVHSLAYRDVG-WRYKPKMTPNLYPFSINFALPAGRGGFVRAKVIATTLSAFMASADPTISTRHVPFDYVTHKGRRTVIDSENQQLFAQDAQTIWGKMTDI--NEKSKRAYYMTHDGYMKLWQLSKPK-RRLSDQYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAVNALTTASHTHIFYLTQ 344
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: UPI001FAD100B (F-box DNA helicase 1 isoform X1 n=3 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAD100B) HSP 1 Score: 127 bits (319), Expect = 2.070e-30 Identity = 84/220 (38.18%), Postives = 117/220 (53.18%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA---------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSE-WVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FN SVA EA+R FP NV+CRT +S+A+ VG RYK S NF T + AK V+ +N + S D+ + +H+ + +I+P + + +Q A+ W +MK + + S Q M H G LKL+QL + P L +YD I +DEAQD I +V+ Q GCG ILVGDPHQ IY F+GA + + + R T LTQ
Sbjct: 498 FNNSVACEARRRFPANVDCRTAHSLAYNDVGR-RYKVHKKLTFNVKPFSINFALPTGAAGFCRAKVVTTILNTFMASADQTIDSQHVPYDYVINKGCRKVIEPEEQKFFIQEAKAIWNKMKDVKEK--SKQAYYMPHDGYLKLWQLRNPK-PRLSDQYDAIFIDEAQDCTPAIMDVLLSQ---GCGKILVGDPHQQIYTFKGAVNALHSVRHTHIFYLTQ 710
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A8URJ7_NOTFU (DNA helicase n=4 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8URJ7_NOTFU) HSP 1 Score: 126 bits (317), Expect = 3.220e-30 Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSEWVL-QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FN SVA EA+R FP NV+C+T++S+A++ VG +RYK S NF +V AK ++ T++ + S D ++ +H+ +T+ID ++ + Q A+ W +M + N S + M+H G +KL+QL++ + L +YDVI LDEAQD I +V+ Q CG ILVGDPHQ IY FRGA + +T T LTQ
Sbjct: 134 FNSSVASEARRRFPSNVDCKTVHSLAYRDVG-WRYKPKMTPNLYPFSINFALPAGRGGFVRAKVIATTLSAFMASADPTISTRHVPFDYVTHKGRRTVIDSENQQLFAQDAQTIWGKMTDI--NEKSKRAYYMTHDGYMKLWQLSKPK-RRLSDQYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAVNALTTASHTHIFYLTQ 344
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A1A8HT58_NOTKU (DNA helicase n=10 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8HT58_NOTKU) HSP 1 Score: 126 bits (317), Expect = 3.830e-30 Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDA-------SWNFTCTTKYVRYVDAKDVSDTMNRYWNSRDEDMTEKHI----------KTLIDPLSEWVL-QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FN SVA EA+R FP NV+C+T++S+A++ VG +RYK S NF +V AK ++ T++ + S D ++ +H+ +T+ID ++ + Q A+ W +M + N S + M+H+G +KL+QL+ + L +YDVI LDEAQD I +V+ Q CG ILVGDPHQ IY FRGA + +T T LTQ
Sbjct: 492 FNSSVASEARRRFPSNVDCKTVHSLAYRDVG-WRYKPKMTPNLYPFSINFALPAGRGGFVRAKVIATTLSAFMASADPTISTRHVPFDYVTHKGRRTVIDSENQQLFAQDAQTIWGKMTDI--NEKSKRAYYMTHNGYMKLWQLSNPK-RRLSDQYDVIFLDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFRGAVNALTTASHTHIFYLTQ 702
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A3B4UQ30_SERDU (DNA helicase n=4 Tax=Seriola TaxID=8160 RepID=A0A3B4UQ30_SERDU) HSP 1 Score: 125 bits (314), Expect = 9.610e-30 Identity = 82/219 (37.44%), Postives = 116/219 (52.97%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGG-FRYKTDASWNFTCTTKYVRYVD-------AKDVSDTMNRYWNSRDEDMTEKHI-----------KTLIDPLSEWVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FNKSVA EA R FPRNV+C+T++S+A+K VG + Y+ + N T D AK V+ T+N + S D+ +T +H+ K + D + A++ W +MK L N + + M+H G LKL+QL + P L +YDV+ +DEAQD I +V+ Q CG ILVGDPHQ IY F+GA + + T LTQ
Sbjct: 447 FNKSVAFEAARRFPRNVDCKTVHSLAFKDVGKRYHYRKKLTANLKAFTINAVLPDGRGGFTKAKVVTTTLNTFMASADQTITTRHVPSTHVTNNGFRKDIDDGEKRLFVHDAQMIWNKMKDL--NETNKEAYSMTHDGYLKLWQLQNPK-PRLSDKYDVLFIDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFKGAVNALQIVDHTHIFYLTQ 659
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A6I9P370_9TELE (DNA helicase n=4 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9P370_9TELE) HSP 1 Score: 125 bits (314), Expect = 9.660e-30 Identity = 87/218 (39.91%), Postives = 116/218 (53.21%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWN---FTCTTKYVR----YVDAKDVSDTMNRYWNSRDEDMTEKHI-----------KTLIDPLSEWVLQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FNKSVA EAQR FP NV C+T++S+A+ VG RY+ +N FT ++ + AK V+ T+N + S DE + H+ K + D E +Q AR W +MK L K S L M+H G LKL+QL + P L +YDV+ +DEAQD I +V+ Q CG ILVGDPHQ IY F+GA + + T LTQ
Sbjct: 491 FNKSVATEAQRRFPSNVACKTVHSLAFTDVGR-RYRQKLIFNMKPFTISSVLPPGRGGFAKAKVVTTTLNAFKASTDECINISHVPMSRMGKNGRRKIITDYERELFVQDARKIWIKMKDLTKT--KSDDLPMTHDGYLKLWQLQR---PCLSDQYDVLFIDEAQDCTPAIMDVLLSQR---CGKILVGDPHQQIYTFKGAVNALHIVDHTHIFYLTQ 699
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A4W6F9Z3_LATCA (DNA helicase n=2 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6F9Z3_LATCA) HSP 1 Score: 125 bits (314), Expect = 9.690e-30 Identity = 86/219 (39.27%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVG-GFRYKTDASWN---FTCTTKYVR----YVDAKDVSDTMNRYWNSRDEDMTEKHI------KT---LIDPLSEWVL--QGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FNKSVA EAQR FPRNV+C+T++S+A++ +G + ++ +WN FT ++ +V AK V T+N + S DE +T +H+ KT + ++E L Q A++ W +MK L N + M+H G LKL+QL + R P L +YDVI +DE+QD I +V+ Q C ILVGDPHQ IY F+GA + + T LTQ
Sbjct: 510 FNKSVACEAQRRFPRNVDCKTVHSLAYRDIGLKYHFRRKLTWNLKPFTISSVLPEGRGGFVKAKVVITTLNAFMASTDEHITIEHVPFAHVTKTGNRMGINIAERPLFVQDAQMIWNKMKDL--NETKIEAYHMTHDGYLKLWQLQEPR-PCLSDKYDVIFIDESQDCTPAIMDVLLSQR---CAKILVGDPHQQIYTFKGAVNALNVVDHTHIYYLTQ 722
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A8C7EHL3_NOTPE (DNA helicase n=2 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C7EHL3_NOTPE) HSP 1 Score: 125 bits (313), Expect = 1.310e-29 Identity = 82/223 (36.77%), Postives = 123/223 (55.16%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWNFTCTTKYV------------RYVDAKDVSDTMNRYWNSRDEDMTEKHIKT----------LIDPLSEWV-LQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FNK+VAE +R FPRNV C+T +S+A++ VG RYK NF+ + + +Y+ K V +T+ ++ S DE+++E+H+ T L+ P + + +Q A+ W MK L + + + ++++ G LKL+QL++ P L YD I +DEAQD I +VV Q+ CGVILVGDPHQ IY FRGA + + T LTQ
Sbjct: 476 FNKAVAERGKRVFPRNVTCKTFHSLAYESVGK-RYKEKGKLNFSSLSAFSVSFLIQHREGQSQYIRGKTVKETLENFFASSDEEISEEHVPTWFKNTHGIRKLVSPEEKRINVQEAKEIWYHMKKLDGD--AEKNYKITYDGYLKLWQLSK---PQLTG-YDAIFVDEAQDCTPAIVDVVLSQS---CGVILVGDPHQQIYTFRGAVNTLYTVPHTHVYYLTQ 688
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Match: A0A3Q1HGC9_ANATE (DNA helicase n=2 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1HGC9_ANATE) HSP 1 Score: 124 bits (310), Expect = 3.320e-29 Identity = 83/218 (38.07%), Postives = 117/218 (53.67%), Query Frame = 1
Query: 1 FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWN---FTCTTKYVR----YVDAKDVSDTMNRYWNSRDEDMTEKHIKTL----------IDPLSEWV-LQGARLAWARMKVLPKNLPSSQRLQMSHSGLLKLFQLAQKRCPTLKSEYDVIMLDEAQDSNDCIANVVTRQAANGCGVILVGDPHQMIYGFRGARDQITNTRGTKTLNLTQ 600
FNKSVA EAQR FPRNV+C+T++S+A+ VG +RY+ ++N FT + + AK V+ T+N + S D +T +H+ + ID + + + A+ W +MK L N ++H G LKL+QL Q P L +Y V+ +DEAQD I NV+ Q CG ILVGDPHQ IY F+GA + + T LTQ
Sbjct: 483 FNKSVANEAQRRFPRNVDCKTVHSLAYSSVG-WRYRKKLTFNLKPFTINSVLPEGRGGFTKAKVVTTTLNTFMASADPTITTRHVPSTHVSNSGNRQHIDECEKLLFVHDAQKIWNKMKDL--NETDEDAYHLTHDGYLKLWQLQQ---PCLSDQYHVLFIDEAQDCTPAIMNVMLSQR---CGKILVGDPHQQIYTFKGAVNALQIVDHTHIYYLTQ 691 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70945.14752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70945.14752.1 >prot_H-elongata_contig70945.14752.1 ID=prot_H-elongata_contig70945.14752.1|Name=mRNA_H-elongata_contig70945.14752.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp FNKSVAEEAQRHFPRNVECRTINSVAWKHVGGFRYKTDASWNFTCTTKYVback to top mRNA from alignment at H-elongata_contig70945:248..1212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70945.14752.1 ID=mRNA_H-elongata_contig70945.14752.1|Name=mRNA_H-elongata_contig70945.14752.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=965bp|location=Sequence derived from alignment at H-elongata_contig70945:248..1212- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70945:248..1212- >mRNA_H-elongata_contig70945.14752.1 ID=mRNA_H-elongata_contig70945.14752.1|Name=mRNA_H-elongata_contig70945.14752.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at H-elongata_contig70945:248..1212- (Himanthalia elongata Himel1 dioecious)back to top |