prot_H-elongata_contig7068.14733.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig7068.14733.1
Unique Name	prot_H-elongata_contig7068.14733.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	206

Homology

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 2.520e-129
Identity = 186/205 (90.73%), Postives = 194/205 (94.63%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGAGGHGRTVDINGQASKKKSSCC 205
            MSRN++PFD+QIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDE+REVS+EEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGP         V++N QASKKK+ CC
Sbjct:    1 MSRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 335 bits (860), Expect = 2.730e-115
Identity = 172/206 (83.50%), Postives = 184/206 (89.32%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPG-GAGGHGRTVDINGQASKKKSSCC 205
            M+R+++PFD+QIKLLMIGDSGVGKTCLLLRYA+D FSQTFITTIGIDFKIKNI+LD+KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF SIRNWVAQIQQHADV VNKILIGNKCD+D EREVS EEGAQLAAEYGIQFFETSAKNDINVEKGFIT+AREVK+RLMADG   GA   G           KKSSCC
Sbjct:    1 MARHESPFDMQIKLLMIGDSGVGKTCLLLRYASDHFSQTFITTIGIDFKIKNIELDTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA)

HSP 1 Score: 314 bits (804), Expect = 9.250e-107
Identity = 157/206 (76.21%), Postives = 180/206 (87.38%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGG-AGGHGRTVDINGQASKKKSSCC 205
            MS+   P+D+QIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN+D+D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV+QIQQHADV VNKIL+GNKCDM +E+ VS EEGA+LA E+GI+F+E SAKNDINVE+ FI IAR+VKDRL+ADG GG A   G +++  GQ S++   CC
Sbjct:    1 MSQQSAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDIDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGGGPAANKGLSLNKPGQGSQRNRGCC 206

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.380e-105
Identity = 158/205 (77.07%), Postives = 173/205 (84.39%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGAGGHGRTVDINGQASKKKSSCC 205
            M+R +NPFD+QIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM  +R VS EEG  LA ++GIQFFETSAKNDINVEK F+TIAREVK+R++ DG   A G    VD       KK  CC
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKRSNEAKK--CC 203

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 308 bits (790), Expect = 1.090e-104
Identity = 155/206 (75.24%), Postives = 178/206 (86.41%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGAGGHGR-TVDINGQASKKKSSCC 205
            M+R++NPFD+QIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV QIQQHADV VNKILIGNKCDM +++ VS EEG  LA EYG++FFETSAKN+INVE GFI IAREVK+RLM +G    G H +  V+++ + +  K  CC
Sbjct:    1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG----GPHKKENVNLSAKPAAPKKGCC 202

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: A0A7S3M9C1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9C1_9STRA)

HSP 1 Score: 306 bits (785), Expect = 8.600e-104
Identity = 158/207 (76.33%), Postives = 172/207 (83.09%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGA--GGHGRTVDINGQASKKKSSCC 205
            M+  DN FD+QIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWVAQIQ HADV VNKILIGNKCD  ++R +S EEG  LA EY I F+ETSAK D+NVEK FITIA +VK+RL+ADG  GA  GGH +     G A++KK  CC
Sbjct:    6 MAGRDNAFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIQLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFISIRNWVAQIQMHADVNVNKILIGNKCDCQDQRAISYEEGEALAKEYNIHFYETSAKQDLNVEKSFITIATDVKNRLIADGGAGAVPGGH-KLAPGGGAAAQKKGGCC 211

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: W7TKL6_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL6_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.840e-103
Identity = 156/201 (77.61%), Postives = 171/201 (85.07%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGAGGHGRTVDINGQASKKK 201
            M+R +NPFD+QIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM  +R VS EEG  LA ++GIQFFETSAKNDINVEK F+TIAREVK+R++ DG   A G    VD       KK
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKRSNEAKK 201

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 305 bits (780), Expect = 4.180e-103
Identity = 157/207 (75.85%), Postives = 174/207 (84.06%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGAGGHGRTVD--INGQASKKKSSCC 205
            M+R++N +D+QIKLLMIGDSGVGKTCLLLRYAN +FSQTFITTIGIDFKIKNI LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV+QIQQHADV VNKILIGNKCDM +ER V+ EEG +LAAEYGIQFFETSAKNDI VE+ F+T+AREVK+RL+ D         R  D  +N Q  K  S  C
Sbjct:    1 MARHENAYDMQIKLLMIGDSGVGKTCLLLRYANAAFSQTFITTIGIDFKIKNITLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDVD-------RKTDARVNLQTQKSSSKSC 200

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BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: A0A024TZG5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZG5_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.000e-102
Identity = 150/180 (83.33%), Postives = 164/180 (91.11%), Query Frame = 0

Query:    1 MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADG 180
            M+RN+NPFD+QIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLD K+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV QIQQHADV VNKIL+GNKCDM +++ VS EEG  LA EYG++FFETSAKN+INVE GFI IA EVK RLM +G
Sbjct:    1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEG 180

[Close]

BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Match: A0A7S2V1J6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J6_9STRA)

HSP 1 Score: 303 bits (776), Expect = 1.160e-102
Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 0

Query:   10 IQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGAGGHGRTVDINGQASKKKSSCC 205
            +QIKLLMIGDSGVGKTCLLLRYAN SFSQTFITTIGIDFKIK IDLD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+KSFNSIRNW++QIQQHADV VNKIL GNKCDM EER V+ EEG +LA+EYGI FFE SAKND+NVE  F+TIAREVKDRL+ D    A G G  V++      KKS CC
Sbjct:    1 MQIKLLMIGDSGVGKTCLLLRYANSSFSQTFITTIGIDFKIKTIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRKSFNSIRNWISQIQQHADVHVNKILCGNKCDMSEERAVTTEEGQKLASEYGIGFFEASAKNDVNVETSFVTIAREVKDRLLLDVGTMARG-GERVNLGNAKPAKKSGCC 195

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot

BLAST of mRNA_H-elongata_contig7068.14733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0A4_ECTSI	2.520e-129	90.73	Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI...	[more]
A0A836CCB2_9STRA	2.730e-115	83.50	Rab8A, rab family GTPase n=2 Tax=Tribonema minus T...	[more]
A0A7S4M6F2_9STRA	9.250e-107	76.21	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A4D9D279_9STRA	1.380e-105	77.07	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
K3WPX9_GLOUD	1.090e-104	75.24	Uncharacterized protein n=28 Tax=Oomycota TaxID=47...	[more]
A0A7S3M9C1_9STRA	8.600e-104	76.33	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
W7TKL6_9STRA	1.840e-103	77.61	Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=...	[more]
A0A6T5Q365_HETAK	4.180e-103	75.85	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A024TZG5_9STRA	1.000e-102	83.33	Uncharacterized protein n=7 Tax=Saprolegniaceae Ta...	[more]
A0A7S2V1J6_9STRA	1.160e-102	79.08	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 150..172 score: 43.27 coord: 53..75 score: 54.58 coord: 12..33 score: 50.82 coord: 35..51 score: 33.09 coord: 115..128 score: 43.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 12..175 e-value: 3.7E-97 score: 338.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..175 e-value: 6.5E-38 score: 141.9
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 17..203 e-value: 3.5E-5 score: 24.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 14..175 e-value: 6.2E-12 score: 33.1
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..176 e-value: 0.0046 score: -0.3
None	No IPR available	GENE3D	3.40.50.300		coord: 5..205 e-value: 9.0E-69 score: 232.8
None	No IPR available	PANTHER	PTHR24073:SF978		coord: 1..182
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..182
None	No IPR available	PROSITE	PS51419	RAB	coord: 7..205 score: 35.112
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 13..173 e-value: 3.9E-65 score: 218.4
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..166 e-value: 1.3E-28 score: 97.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..175

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig7068	contig	H-elongata_contig7068:2227..7487 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig7068.14733.1	mRNA_H-elongata_contig7068.14733.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig7068 1692..9163 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig7068.14733.1 ID=prot_H-elongata_contig7068.14733.1|Name=mRNA_H-elongata_contig7068.14733.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MSRNDNPFDIQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKI
KNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFN
SIRNWVAQIQQHADVAVNKILIGNKCDMDEEREVSKEEGAQLAAEYGIQF
FETSAKNDINVEKGFITIAREVKDRLMADGPGGAGGHGRTVDINGQASKK
KSSCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase