prot_H-elongata_contig7062.14722.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7062.14722.1
Unique Nameprot_H-elongata_contig7062.14722.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length400
Homology
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 7.010e-124
Identity = 193/407 (47.42%), Postives = 255/407 (62.65%), Query Frame = 0
Query:   38 LDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            +DV T F  AD++EEV+V+  PG+E  DK  G   V+KL KSLYGL QSP NWF+T+D  +  IGF + KSD CVY++++      LTLYVD +LL   +   +  +K +L   F + DLG+ S VLGM                                               P D  LD++  + YQ I G+LMY+AQ  RYDI+YA  QL R ++KPSK HM AAKH LRYL G  +FSI Y++GGFKL T++D+NW  NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+  AMKE++FC+NM+ ELGF + F  +PVY  NT+ LH  GNR+FS R K IALR+FF++ELV EG+++IH+  TE  LAD+G K+  KHR    + L+N F
Sbjct:   29 MDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.310e-117
Identity = 197/421 (46.79%), Postives = 258/421 (61.28%), Query Frame = 0
Query:   38 LDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKN----KQLL-------------GKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVN 395
            +DV T F  AD++EEV+V+  PG+E  DK G   V+KL KSLYGL QSP NWF+T+D  L  IGF + KSD CVY++++      LTLYVD +LL   +    K LL             GKL+K+    F + DLG+ S  LGM                                               P D  LD++  + YQ I G+LMY+AQ  RYDI+YA  QL R+++KPSK HM AAKH LRYL G  +FSI Y++GGFKL T++D+NW  NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+  AMKE++FC+NM+ ELG  + F  +PVY  NT+ LH  GNR+FS R K IALR+FF++ELV EG+++IH+V TE  LAD+G K+  KHR    + L+N
Sbjct:  238 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKR----FKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 2.080e-114
Identity = 193/406 (47.54%), Postives = 254/406 (62.56%), Query Frame = 0
Query:   38 LDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            +DV T F  AD++EEV+V+  PG+E  DK G   V+KL KSLYGL QSP NWF+T+D  L  IGF + KSD CVY++++      LTLYVD +LL   +   +  +K +L   F + DLG+ S VLGM                                               P D  LD++  + YQ I G+LMY+AQ  RYDI+YA  QL R ++KPSK HM AAKH LRYL G  +FSI Y++GGFKL T++D+NW  NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+  AM E++F +NM+ ELGF + F  +PVY  NT+ LH  GNR+FS R K IALR+FF++ELV EG+++IH+V TE  LAD+G K+  KHR    + L+N F
Sbjct: 1259 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 3.070e-110
Identity = 193/468 (41.24%), Postives = 271/468 (57.91%), Query Frame = 0
Query:    1 MSLPQVAQWKAAADKKIACLKKQGVYELVP-----LGY-----------------------------------------------------------DMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLL-GKLKKQLTGHFDIKDLGDVSN------VLGMNPADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            M LP+   WKAA DK+I  L+   VY+LVP     LG+                                                           D+  LDV+T F  AD+EE V+V+MAPGYE  +   +  V+KL+KSL GL QSP++W  T+D  L  IGF   KSD+CVY++++     +LTLYVD +L++        G     +   F +     +S       +    P +  L+ +GK+ YQ I G++MYLAQ +RYDI+Y  +Q  RA+S PSK HMGAAKH+LRYL+G+ +FSI Y+RGGF L   ++AN G N DNG+S SSYI++++  P S K GLQSLTA ST+E ELVA+  AMKE +FC NM+ ELGF   F S P++I +T+ L+V GN+TFS   K +ALR+F+++++VKEG+++IH++ TE  LAD+G +YL K RH + I  +  F
Sbjct:  309 MELPETKLWKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 4.330e-106
Identity = 196/478 (41.00%), Postives = 267/478 (55.86%), Query Frame = 0
Query:    4 PQVAQWKAAADKKIACLKKQGVYELVPL-------------------------------GYDMFM-LDVQTTF-PNADVEEE-----VYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            P   +W AAA++++  L  + VY+LVP                                G++    LD  +T+ P   ++       + V     ++  D  G   V+KL KSLYGL QSP NWF+T+D  L  IGF + KSD CVY++++      LTLYVD +LL   +   +  +K +L   F + DLG+ S VL M                                               P D  LD++  + YQ I G+LMY+AQ  RYDI+YA  QL R ++KPSK HM AAKH LRYL G  +FSI Y++GGFKL T++D+NW  NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+  AMKE++FC+NM+ ELGF + F  +PVY  NT+ LH  GNR+FS R K IALR+FF++ELV EG+++IH+V TE  LAD+G K+   HR    + L+N F
Sbjct:  519 PDATKWNAAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGG-DMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 1.130e-105
Identity = 191/450 (42.44%), Postives = 263/450 (58.44%), Query Frame = 0
Query:    7 AQWKAAADKKIACLKKQGVYELV-----PLG----------------------YDMFM--LDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLL-----------------GKLK-------KQLTGHFDIKDLGDVSNV-LG-----MNPADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            AQW AAA+++IA LK + VY+LV     P G                      +D+ +  +DV   F  AD++E+VYV+  PG+E   ++G   V+ L+KSLY L QSP NWF T+D  L +IGF   K D CVY +++      LTL VD +LL   N   L                 G L        K +   F +      S   LG     + P +  L+++  + YQ I G L+YL+Q  RYDI+YA +QL R ++KPSK HMGAAK   RYL G T F I Y+RGGFKL  +TD+NWG NPDNG+STSS++ +L + P++FK GLQSLT QST+EVELVAA  A+KE++FC+N++ ELGF +    VP+Y  NT+ LH  GNR++S   K IALR+FF++ELV EG++ IH+V  +   AD+G K+L K R    + ++  F
Sbjct:  269 AQWIAAAEREIADLKDRKVYKLVLRSTVPRGRRRINFRWVTQSVRVLLCITVEFDLIIVQMDVTAAFLYADIQEDVYVEQPPGFEVKGENGEDLVMLLQKSLYWLAQSPGNWFHTIDPFLISIGFVPLKPDPCVYFYDHDGSQMYLTLSVDDLLLAGNNSDALSIASLISGMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNF 718          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.090e-94
Identity = 169/414 (40.82%), Postives = 246/414 (59.42%), Query Frame = 0
Query:   33 YDMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            + ++ LDV   F NA  +  VYV+ APG    + + G P V KL++SLYGL QSP  W  T+D+ L+  G++  +SD CVY+  Y +GN   ILT+YVD IL+   ++QL+ + KK+LT  F++ D+G+V  +LG++                                              P D+ L    KKIYQ +TG+++YLAQ +++D+ YA  QL +A S P++ +M AAKHVLRYL G     I Y+RG F+L  +TD+++G NPDNGRST+ Y+  LA G IS+    Q+LTAQST+E E+ A   + +E+++ +N + EL F + F SVP+   +T AL V+GN   S R K +ALRYFF++ELV  GQ+T+H   +EHQLAD+  KYL KHR    I+ + +F
Sbjct:   81 WPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYV--YTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 491          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 9.110e-92
Identity = 168/414 (40.58%), Postives = 246/414 (59.42%), Query Frame = 0
Query:   33 YDMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            + ++ LDV   F NA  + +VYV+ APG    + + G P V KL++SLYGL QS   W  T+D+ L+ +G++  +SD CVY+  Y +GN   ILT+YVD IL+   ++QL+ + KK+LT  F++ D+G+V  +LG++                                              P D+ L    KKIYQ + G+++YLAQ +R+D+ YA  QL +A S P++ +M AAKHVLRYL G     I Y+RG F+L  +TD+++G NPDNGRST+ Y+  LA G IS+    Q+LTAQST+E E+ A   + +E+++ +N + EL F + F SVP+   +T AL V+GN   S R K +ALRYFF++ELV  GQ+T+H   +EHQLAD+  KYL KHR    I+ + +F
Sbjct:  289 WPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYV--YTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 699          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 1.550e-91
Identity = 169/414 (40.82%), Postives = 246/414 (59.42%), Query Frame = 0
Query:   33 YDMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            + ++ LDV   F NA  + +VYV+ APG    + + G P V KL++SLYGL QSP  W  T+D+ L+  G++  +SD CVY+  Y +GN   ILT+YVD IL+   ++QL+ + KK+LT  F++ D+G+V  +LG++                                              P D+ L    KKIYQ +TG+++YLAQ +R+D+ YA  QL +A S P++ +M AAKHVLRYL G     I Y+RG F+L  +TD+++G NPDNGRST+ Y+  LA G IS+    Q+LTAQST+E E+ A   + +E+++ +N + EL F + F SVP+   +T AL V+GN   S R K + LRYFF++ELV  GQ+T+H   +EHQLAD+  KYL KHR    I+ + +F
Sbjct:  445 WPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYV--YTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 855          
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 1.580e-84
Identity = 154/374 (41.18%), Postives = 221/374 (59.09%), Query Frame = 0
Query:   72 VIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 397
            V KL++SLYGL QSP  W  T+D+ L+  G++  +SD CVY+  Y TGN   ILT+YVD IL+   ++QL+ + KK+LT  F++ D+G+V  +LG+                                               P D+ L    KK YQ +TG+++YLAQ +R+D+ YA  QL +A S P++ +M AAKHVLRYL G     I Y+RG F+L  +TD+++G NPDNGRST+ Y+  LA G IS+    Q+LTAQST+E E+ A   + +E+++ +N + EL F + F SVP+   +T AL V+GN   S R   +ALR FF++ELV  GQ+T+H   +EHQLAD+  KYL KHR    I+ + +F
Sbjct:    2 VYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYV--YTTGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTN-VALRCFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE7.010e-12447.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE1.310e-11746.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE2.080e-11447.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R7_9PHAE3.070e-11041.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNH5_9PHAE4.330e-10641.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG39_9PHAE1.130e-10542.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KQD0_9PHAE1.090e-9440.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE9.110e-9240.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE1.550e-9140.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KUJ3_9PHAE1.580e-8441.18Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 35..167
e-value: 2.1E-31
score: 109.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 171..365
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 171..365
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 17..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7062contigH-elongata_contig7062:6715..8244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7062.14722.1mRNA_H-elongata_contig7062.14722.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7062 6715..8244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7062.14722.1 ID=prot_H-elongata_contig7062.14722.1|Name=mRNA_H-elongata_contig7062.14722.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=400bp
MSLPQVAQWKAAADKKIACLKKQGVYELVPLGYDMFMLDVQTTFPNADVE
EEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTI
GFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLLGKLKKQLTGH
FDIKDLGDVSNVLGMNPADRRLDKQGKKIYQPITGALMYLAQASRYDILY
AINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDA
NWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAM
KESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALR
YFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEFRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like