mRNA_H-elongata_contig7062.14722.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 374 bits (961), Expect = 7.010e-124 Identity = 193/407 (47.42%), Postives = 255/407 (62.65%), Query Frame = 1
Query: 112 LDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
+DV T F AD++EEV+V+ PG+E DK G V+KL KSLYGL QSP NWF+T+D + IGF + KSD CVY++++ LTLYVD +LL + + +K +L F + DLG+ S VLGM P D LD++ + YQ I G+LMY+AQ RYDI+YA QL R ++KPSK HM AAKH LRYL G +FSI Y++GGFKL T++D+NW NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+ AMKE++FC+NM+ ELGF + F +PVY NT+ LH GNR+FS R K IALR+FF++ELV EG+++IH+ TE LAD+G K+ KHR + L+N F
Sbjct: 29 MDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 365 bits (938), Expect = 1.310e-117 Identity = 197/421 (46.79%), Postives = 258/421 (61.28%), Query Frame = 1
Query: 112 LDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKN----KQLL-------------GKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVN 1185
+DV T F AD++EEV+V+ PG+E DK G V+KL KSLYGL QSP NWF+T+D L IGF + KSD CVY++++ LTLYVD +LL + K LL GKL+K+ F + DLG+ S LGM P D LD++ + YQ I G+LMY+AQ RYDI+YA QL R+++KPSK HM AAKH LRYL G +FSI Y++GGFKL T++D+NW NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+ AMKE++FC+NM+ ELG + F +PVY NT+ LH GNR+FS R K IALR+FF++ELV EG+++IH+V TE LAD+G K+ KHR + L+N
Sbjct: 238 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKR----FKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 376 bits (965), Expect = 2.080e-114 Identity = 193/406 (47.54%), Postives = 254/406 (62.56%), Query Frame = 1
Query: 112 LDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
+DV T F AD++EEV+V+ PG+E DK G V+KL KSLYGL QSP NWF+T+D L IGF + KSD CVY++++ LTLYVD +LL + + +K +L F + DLG+ S VLGM P D LD++ + YQ I G+LMY+AQ RYDI+YA QL R ++KPSK HM AAKH LRYL G +FSI Y++GGFKL T++D+NW NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+ AM E++F +NM+ ELGF + F +PVY NT+ LH GNR+FS R K IALR+FF++ELV EG+++IH+V TE LAD+G K+ KHR + L+N F
Sbjct: 1259 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 350 bits (897), Expect = 3.070e-110 Identity = 193/468 (41.24%), Postives = 271/468 (57.91%), Query Frame = 1
Query: 1 MSLPQVAQWKAAADKKIACLKKQGVYELVP-----LGY-----------------------------------------------------------DMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLL-GKLKKQLTGHFDIKDLGDVSN------VLGMNPADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
M LP+ WKAA DK+I L+ VY+LVP LG+ D+ LDV+T F AD+EE V+V+MAPGYE + + V+KL+KSL GL QSP++W T+D L IGF KSD+CVY++++ +LTLYVD +L++ G + F + +S + P + L+ +GK+ YQ I G++MYLAQ +RYDI+Y +Q RA+S PSK HMGAAKH+LRYL+G+ +FSI Y+RGGF L ++AN G N DNG+S SSYI++++ P S K GLQSLTA ST+E ELVA+ AMKE +FC NM+ ELGF F S P++I +T+ L+V GN+TFS K +ALR+F+++++VKEG+++IH++ TE LAD+G +YL K RH + I + F
Sbjct: 309 MELPETKLWKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 344 bits (883), Expect = 4.330e-106 Identity = 196/478 (41.00%), Postives = 267/478 (55.86%), Query Frame = 1
Query: 10 PQVAQWKAAADKKIACLKKQGVYELVPL-------------------------------GYDMFM-LDVQTTF-PNADVEEE-----VYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
P +W AAA++++ L + VY+LVP G++ LD +T+ P ++ + V ++ D G V+KL KSLYGL QSP NWF+T+D L IGF + KSD CVY++++ LTLYVD +LL + + +K +L F + DLG+ S VL M P D LD++ + YQ I G+LMY+AQ RYDI+YA QL R ++KPSK HM AAKH LRYL G +FSI Y++GGFKL T++D+NW NPDNG+STSSY+ +LAN P+SF+ GLQ LTA ST+E ELVA+ AMKE++FC+NM+ ELGF + F +PVY NT+ LH GNR+FS R K IALR+FF++ELV EG+++IH+V TE LAD+G K+ HR + L+N F
Sbjct: 519 PDATKWNAAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGG-DMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE) HSP 1 Score: 337 bits (864), Expect = 1.130e-105 Identity = 191/450 (42.44%), Postives = 263/450 (58.44%), Query Frame = 1
Query: 19 AQWKAAADKKIACLKKQGVYELV-----PLG----------------------YDMFM--LDVQTTFPNADVEEEVYVKMAPGYETSDKSGVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGNAILTLYVDAILLLSKNKQLL-----------------GKLK-------KQLTGHFDIKDLGDVSNV-LG-----MNPADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
AQW AAA+++IA LK + VY+LV P G +D+ + +DV F AD++E+VYV+ PG+E ++G V+ L+KSLY L QSP NWF T+D L +IGF K D CVY +++ LTL VD +LL N L G L K + F + S LG + P + L+++ + YQ I G L+YL+Q RYDI+YA +QL R ++KPSK HMGAAK RYL G T F I Y+RGGFKL +TD+NWG NPDNG+STSS++ +L + P++FK GLQSLT QST+EVELVAA A+KE++FC+N++ ELGF + VP+Y NT+ LH GNR++S K IALR+FF++ELV EG++ IH+V + AD+G K+L K R + ++ F
Sbjct: 269 AQWIAAAEREIADLKDRKVYKLVLRSTVPRGRRRINFRWVTQSVRVLLCITVEFDLIIVQMDVTAAFLYADIQEDVYVEQPPGFEVKGENGEDLVMLLQKSLYWLAQSPGNWFHTIDPFLISIGFVPLKPDPCVYFYDHDGSQMYLTLSVDDLLLAGNNSDALSIASLISGMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNF 718
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE) HSP 1 Score: 301 bits (771), Expect = 1.090e-94 Identity = 169/414 (40.82%), Postives = 246/414 (59.42%), Query Frame = 1
Query: 97 YDMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
+ ++ LDV F NA + VYV+ APG + + G P V KL++SLYGL QSP W T+D+ L+ G++ +SD CVY+ Y +GN ILT+YVD IL+ ++QL+ + KK+LT F++ D+G+V +LG++ P D+ L KKIYQ +TG+++YLAQ +++D+ YA QL +A S P++ +M AAKHVLRYL G I Y+RG F+L +TD+++G NPDNGRST+ Y+ LA G IS+ Q+LTAQST+E E+ A + +E+++ +N + EL F + F SVP+ +T AL V+GN S R K +ALRYFF++ELV GQ+T+H +EHQLAD+ KYL KHR I+ + +F
Sbjct: 81 WPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYV--YTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 491
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE) HSP 1 Score: 300 bits (767), Expect = 9.110e-92 Identity = 168/414 (40.58%), Postives = 246/414 (59.42%), Query Frame = 1
Query: 97 YDMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
+ ++ LDV F NA + +VYV+ APG + + G P V KL++SLYGL QS W T+D+ L+ +G++ +SD CVY+ Y +GN ILT+YVD IL+ ++QL+ + KK+LT F++ D+G+V +LG++ P D+ L KKIYQ + G+++YLAQ +R+D+ YA QL +A S P++ +M AAKHVLRYL G I Y+RG F+L +TD+++G NPDNGRST+ Y+ LA G IS+ Q+LTAQST+E E+ A + +E+++ +N + EL F + F SVP+ +T AL V+GN S R K +ALRYFF++ELV GQ+T+H +EHQLAD+ KYL KHR I+ + +F
Sbjct: 289 WPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYV--YTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 699
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 303 bits (775), Expect = 1.550e-91 Identity = 169/414 (40.82%), Postives = 246/414 (59.42%), Query Frame = 1
Query: 97 YDMFMLDVQTTFPNADVEEEVYVKMAPGYETSDKS-GVPFVIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
+ ++ LDV F NA + +VYV+ APG + + G P V KL++SLYGL QSP W T+D+ L+ G++ +SD CVY+ Y +GN ILT+YVD IL+ ++QL+ + KK+LT F++ D+G+V +LG++ P D+ L KKIYQ +TG+++YLAQ +R+D+ YA QL +A S P++ +M AAKHVLRYL G I Y+RG F+L +TD+++G NPDNGRST+ Y+ LA G IS+ Q+LTAQST+E E+ A + +E+++ +N + EL F + F SVP+ +T AL V+GN S R K + LRYFF++ELV GQ+T+H +EHQLAD+ KYL KHR I+ + +F
Sbjct: 445 WPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYV--YTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 855
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE) HSP 1 Score: 271 bits (693), Expect = 1.580e-84 Identity = 154/374 (41.18%), Postives = 221/374 (59.09%), Query Frame = 1
Query: 214 VIKLKKSLYGLQQSPKNWFSTMDDHLSTIGFRSPKSDSCVYMFEYKTGN--AILTLYVDAILLLSKNKQLLGKLKKQLTGHFDIKDLGDVSNVLGMN----------------------------------------------PADRRLDKQGKKIYQPITGALMYLAQASRYDILYAINQLVRAISKPSKAHMGAAKHVLRYLTGATNFSIAYRRGGFKLVTYTDANWGGNPDNGRSTSSYIVILANGPISFKVGLQSLTAQSTIEVELVAAVTAMKESLFCANMIMELGFTEGFQSVPVYIGNTSALHVSGNRTFSPRAKQIALRYFFVQELVKEGQVTIHFVNTEHQLADLGRKYLKKHRHHFFIKLVNEF 1191
V KL++SLYGL QSP W T+D+ L+ G++ +SD CVY+ Y TGN ILT+YVD IL+ ++QL+ + KK+LT F++ D+G+V +LG+ P D+ L KK YQ +TG+++YLAQ +R+D+ YA QL +A S P++ +M AAKHVLRYL G I Y+RG F+L +TD+++G NPDNGRST+ Y+ LA G IS+ Q+LTAQST+E E+ A + +E+++ +N + EL F + F SVP+ +T AL V+GN S R +ALR FF++ELV GQ+T+H +EHQLAD+ KYL KHR I+ + +F
Sbjct: 2 VYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYV--YTTGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTN-VALRCFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 371 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7062.14722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7062.14722.1 >prot_H-elongata_contig7062.14722.1 ID=prot_H-elongata_contig7062.14722.1|Name=mRNA_H-elongata_contig7062.14722.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=400bp MSLPQVAQWKAAADKKIACLKKQGVYELVPLGYDMFMLDVQTTFPNADVEback to top mRNA from alignment at H-elongata_contig7062:6715..8244+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7062.14722.1 ID=mRNA_H-elongata_contig7062.14722.1|Name=mRNA_H-elongata_contig7062.14722.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1530bp|location=Sequence derived from alignment at H-elongata_contig7062:6715..8244+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7062:6715..8244+ >mRNA_H-elongata_contig7062.14722.1 ID=mRNA_H-elongata_contig7062.14722.1|Name=mRNA_H-elongata_contig7062.14722.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2400bp|location=Sequence derived from alignment at H-elongata_contig7062:6715..8244+ (Himanthalia elongata Himel1 dioecious)back to top |