prot_H-elongata_contig7055.14707.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7055.14707.1
Unique Nameprot_H-elongata_contig7055.14707.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length296
Homology
BLAST of mRNA_H-elongata_contig7055.14707.1 vs. uniprot
Match: D7FRK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRK7_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.440e-138
Identity = 204/296 (68.92%), Postives = 247/296 (83.45%), Query Frame = 0
Query:    1 GHKPRDNLANKLTYTCMRHGDAELMHKALDLLQITGNAVVPLTVQNVLYMATRKRDAELATKIWVAAQGWGHTFSDVDYSLTVQAFMAVGKDEMALATLVQAFKDGRTVTRKTLTFCAHRLSISNNRLDGAYYTLTSLKQNGETVPVEAVNTIIVGCAIRGGVDRCFSTAEALPAVFELQPNLDTYNALMHVLSKMRKQEIENASLGIGMSLLDKMDSEGVKPDEETFISLVDLACSSEGLSEAVADELVERMTTRYGLRLDQDVVDTLANAFHDRGEEDVAQAWAARLPPLDGAS 296
            G +PRD L NKLTY CMR G+ ELMHK LDLL +TGN V P+TV+NVLYMATR+RD ++ATK+WVAAQ WGH+FS  DYS  VQ F AVGKD+MALATLVQA+K+   V RKTLTFCA RL++SN R+D AYYTLT LK+NGE VPVEAVN+IIV CAIR  VDRCF+TAEALP VFEL PNLDTYNALMHVL  MR Q+ +NA+LGIGMSLLD+++ E VKP++ETF+SL+DLAC S+GL+E  AD+LVERMT+++GLRL+QD+VDTLA+AF +RG + +AQAW  ++P LD  S
Sbjct:  428 GMRPRDPLMNKLTYACMRQGEPELMHKTLDLLLLTGNIVNPMTVKNVLYMATRRRDDDMATKMWVAAQQWGHSFSQADYSFVVQTFFAVGKDDMALATLVQAYKEKVEVNRKTLTFCAQRLAVSNKRVDQAYYTLTLLKENGEPVPVEAVNSIIVACAIRQAVDRCFATAEALPVVFELAPNLDTYNALMHVLGAMRAQDTDNATLGIGMSLLDQIEKEEVKPNQETFMSLIDLACMSDGLTEDFADDLVERMTSKHGLRLEQDIVDTLASAFEERGMDSLAQAWTNKMPSLDAPS 723          
BLAST of mRNA_H-elongata_contig7055.14707.1 vs. uniprot
Match: W7TTJ6_9STRA (Pentatricopeptide repeat containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTJ6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.520e-12
Identity = 68/256 (26.56%), Postives = 126/256 (49.22%), Query Frame = 0
Query:    7 NLANKLTYTCMRHGDAELMHKALDLLQITGNAVVPLTVQNVLYMATRKRDAELATKIWVAAQGWGHTFSDVDYSLTVQAFMAVGKDEMA-LATLVQAFKDGRTVTRKTLTFCAHRLSISNNRLDGAYYTLTSLKQ----------------------NGE----------TVPVE--AVNTIIVGCAIRGGVDRCFSTAEALPAVFELQPNLDTYNALMHVLSKMRKQEIENASLGIGMSLLDKMDSEGVKPDEET 227
            N+  K+    +  G+ +++ + L+ L +  +  + L + N   MA ++ D +LA  ++ A +GWG + +   ++  +QA + + K+++A L  L +    G T +  TL   A +LS S  RLD AY  L +L++                      +GE           +PV   AV  I++GCA    +DR F+T E    VF L  + +  NAL+  L+ +R + ++   +G  +S++++MD  G+ P++ET
Sbjct:  357 NMVTKVLEVGIETGNVKVLRQGLNALTMPVDRGMGLQILN---MAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQA-LGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALL--LACLRSRSLQ---VGAAISVMNEMDRLGIAPNDET 603          
BLAST of mRNA_H-elongata_contig7055.14707.1 vs. uniprot
Match: A0A4D9DA12_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA12_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.940e-12
Identity = 67/255 (26.27%), Postives = 120/255 (47.06%), Query Frame = 0
Query:    7 NLANKLTYTCMRHGDAELMHKALDLLQITGNAVVPLTVQNVLYMATRKRDAELATKIWVAAQGWGHTFSDVDYSLTVQAFMAVGKDEMALATLVQAFKDGRTVTRKTLTFCAHRLSISNNRLDGAYYTLTSLKQ----------------------NGE----------TVPVE--AVNTIIVGCAIRGGVDRCFSTAEALPAVFELQPNLDTYNALMHVLSKMRKQEIENASLGIGMSLLDKMDSEGVKPDEET 227
            N+  K+    +  G+ +++ + L+ L +  +  + L + N   MA ++ D +LA  ++ A +GWG   + + ++  +QA      D   L  L +    G T +  TL   A +LS S  RLD AY  L +L++                      +GE           +PV   AV  I++GCA    +DR F+T E    VF L  + +  NAL+  L+ +R + ++   +G  +S++++MD  G+ P++ET
Sbjct:  357 NMVTKVLEVGIETGNVKVLRQGLNALTMPVDRGMGLQILN---MAAKRGDGQLAMDVFYALEGWGFPPTALVFNAVIQALGLSKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRREQQAVDGKDGEGADPTFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYHPVFGLAYDTNASNALL--LACLRSRSLQ---VGAAISVMNEMDRLGIAPNDET 603          
BLAST of mRNA_H-elongata_contig7055.14707.1 vs. uniprot
Match: A0A7I4ATU3_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ATU3_PHYPA)

HSP 1 Score: 70.5 bits (171), Expect = 6.670e-10
Identity = 35/101 (34.65%), Postives = 59/101 (58.42%), Query Frame = 0
Query:  128 LDGAYYTLTSLKQNGETVPVEAVNTIIVGCAIRGGVDRCFSTAEALPAVFELQPNLDTYNALMHVLSKMRKQEIENASLGIGMSLLDKMDSEGVKPDEETF 228
            LDGAY+ L  +  +G++VP+ A+N +I+GCA     DR + T E++  +F L P++ + NAL+    K RK  +E       + L + M+  G+ PD+ +F
Sbjct:  454 LDGAYFKLAEMHGSGQSVPLAALNCVILGCAYIWDADRAYQTFESIGNIFGLSPDVHSINALLEAFGKTRKT-VE------AVKLFEYMNEAGITPDQRSF 547          
BLAST of mRNA_H-elongata_contig7055.14707.1 vs. uniprot
Match: K2RV78_MACPH (Protein-tyrosine phosphatase receptor/non-receptor type n=1 Tax=Macrophomina phaseolina (strain MS6) TaxID=1126212 RepID=K2RV78_MACPH)

HSP 1 Score: 61.6 bits (148), Expect = 6.640e-7
Identity = 63/255 (24.71%), Postives = 103/255 (40.39%), Query Frame = 0
Query:    7 NLANKLTYTCMRHGDAELMHKALDLL---QITGNAVVPLT--VQNVLYMATRKRDAELATKIWVAAQGWGHTFSDVDYSLTVQAFMAVGKDEMALATLVQAFKDGRTVTRKTLTFCAHRLSISNNRLDGAYYTLTSLKQNGETVPVEAVNTIIVGCAIRGGVDRCFSTAEALPAVFELQPNLDTYNALMHVLSKMRKQEIENASLGIGMSLLDKMDSEGVKPDEETFISLVDLACSSEGLSEAVADELVERMTTR 256
            N++  + Y+ +      L H A++ +   Q+    + P +    N L  A+R  DA+LAT +           +   Y + V+ ++     + AL+ L      G      +       +   ++R    +  L SLK+ G TVPV AVN +I     R  +D+     +AL  V E  P   T+N L     K +          + M L  +M    V+PD  T+  L+ L C SE  +   A    E M +R
Sbjct:  279 NISKAVWYSLLDAASNTLNHPAIEYIWRRQVDPGYLKPSSGICFNALISASRHADADLATTVVRLLGERKEVLTTQHYEMLVETYVKAEDMKTALSVLCIMQSSGTPPDEYSTRLLFKWVRADSSRGIQLFDELRSLKEEGSTVPVAAVNALIEASIYRNDLDQAIDMYKALHTVCESGPTTATFNILFRGCPKRKD---------LAMFLAAEMVERNVEPDALTYDRLL-LVCLSEQDNYDDAFRYYEEMRSR 523          
BLAST of mRNA_H-elongata_contig7055.14707.1 vs. uniprot
Match: A0A8H4ILH5_9PEZI (Protein-tyrosine phosphatase receptor/non-receptor type n=2 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4ILH5_9PEZI)

HSP 1 Score: 57.4 bits (137), Expect = 1.630e-5
Identity = 53/211 (25.12%), Postives = 82/211 (38.86%), Query Frame = 0
Query:   46 NVLYMATRKRDAELATKIWVAAQGWGHTFSDVDYSLTVQAFMAVGKDEMALATLVQAFKDGRTVTRKTLTFCAHRLSISNNRLDGAYYTLTSLKQNGETVPVEAVNTIIVGCAIRGGVDRCFSTAEALPAVFELQPNLDTYNALMHVLSKMRKQEIENASLGIGMSLLDKMDSEGVKPDEETFISLVDLACSSEGLSEAVADELVERMTTR 256
            N L  A R  DA+L+T ++          +   Y + V  ++ V     AL+ L      G      ++      +     R    +  L SLK+ G  VP+ AVN +I     R  +D+     +AL  V E  P   T+N L     K +          + M L  +M    V+PD  T+  L+ L C +E  +   A    E M +R
Sbjct:  369 NALISAARHADADLSTSVFQLLGERKEVLTQQHYEMLVDTYVKVEDMRTALSVLCIMQSSGTPPDEFSMRLLFKWVRNQPERAMQLFGELRSLKEEGNAVPIVAVNALIEAAIYRNDLDQAIDMYKALHTVCESGPTTATFNILFRGCPKRKD---------LAMFLAAEMVERNVEPDALTYDRLL-LICLNEQDNYDDAFRYYEEMRSR 569          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7055.14707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FRK7_ECTSI1.440e-13868.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TTJ6_9STRA4.520e-1226.56Pentatricopeptide repeat containing protein n=1 Ta... [more]
A0A4D9DA12_9STRA4.940e-1226.27Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7I4ATU3_PHYPA6.670e-1034.65Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
K2RV78_MACPH6.640e-724.71Protein-tyrosine phosphatase receptor/non-receptor... [more]
A0A8H4ILH5_9PEZI1.630e-525.12Protein-tyrosine phosphatase receptor/non-receptor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 178..257
e-value: 1.6E-6
score: 27.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 83..291
e-value: 5.8E-19
score: 70.6
NoneNo IPR availablePANTHERPTHR47205FAMILY NOT NAMEDcoord: 128..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7055contigH-elongata_contig7055:13..3835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7055.14707.1mRNA_H-elongata_contig7055.14707.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7055 13..3835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7055.14707.1 ID=prot_H-elongata_contig7055.14707.1|Name=mRNA_H-elongata_contig7055.14707.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=296bp
GHKPRDNLANKLTYTCMRHGDAELMHKALDLLQITGNAVVPLTVQNVLYM
ATRKRDAELATKIWVAAQGWGHTFSDVDYSLTVQAFMAVGKDEMALATLV
QAFKDGRTVTRKTLTFCAHRLSISNNRLDGAYYTLTSLKQNGETVPVEAV
NTIIVGCAIRGGVDRCFSTAEALPAVFELQPNLDTYNALMHVLSKMRKQE
IENASLGIGMSLLDKMDSEGVKPDEETFISLVDLACSSEGLSEAVADELV
ERMTTRYGLRLDQDVVDTLANAFHDRGEEDVAQAWAARLPPLDGAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf