prot_H-elongata_contig70497.14704.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig70497.14704.1
Unique Name	prot_H-elongata_contig70497.14704.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	201

Homology

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: D8LT56_ECTSI (Decapping nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT56_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 1.770e-123
Identity = 175/202 (86.63%), Postives = 187/202 (92.57%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQKWEIQVFKEGGVIYLEV-MSDRNRGMMDRTSYWGRRFETLCVLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGRFVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            GKDLN GYLNYVEPD+ SSTSEI EMLDETPGLEREEE+AHFITYRNNLNKILV PYSKQKWE++VFKEGGVIYLEV M++RN+G +DRTSYWGRRFETLCVLGVEGARLDELQRGP D  RPSY  L+RS LGSHNLLMGAEIDACRP +PGRFVEIKTTR IRDSKDEQIFKKHKTLKYW QCYLAGVRD+V+GYRDDHG
Sbjct:  139 GKDLNQGYLNYVEPDSTSSTSEIAEMLDETPGLEREEEAAHFITYRNNLNKILVTPYSKQKWEMEVFKEGGVIYLEVVMTNRNQGKLDRTSYWGRRFETLCVLGVEGARLDELQRGPGDLPRPSYCGLYRSRLGSHNLLMGAEIDACRPGDPGRFVEIKTTRLIRDSKDEQIFKKHKTLKYWAQCYLAGVRDIVLGYRDDHG 340

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: A0A6H5JPT0_9PHAE (Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT0_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 8.990e-122
Identity = 175/214 (81.78%), Postives = 187/214 (87.38%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQKWEIQ------------VFKEGGVIYLEV-MSDRNRGMMDRTSYWGRRFETLCVLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGRFVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            GKDLN GYLNYVEPD+ SSTSEI EMLDETPGLEREEE+AHFITYRNNLNKILV PYSKQKWE++            VFKEGGVIYLEV M++RN+G +DRTSYWGRRFETLCVLGVEGARLDELQRGP D  RPSY  L+RS LGSHNLLMGAEIDACRP +PGRFVEIKTTR IRDSKDEQIFKKHKTLKYW QCYLAGVRD+V+GYRDDHG
Sbjct:    3 GKDLNQGYLNYVEPDSTSSTSEIAEMLDETPGLEREEEAAHFITYRNNLNKILVTPYSKQKWEMEHPPLRLDNDPSKVFKEGGVIYLEVVMTNRNQGKLDRTSYWGRRFETLCVLGVEGARLDELQRGPGDLPRPSYCGLYRSRLGSHNLLMGAEIDACRPGDPGRFVEIKTTRLIRDSKDEQIFKKHKTLKYWAQCYLAGVRDIVLGYRDDHG 216

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: UPI001CB947C1 (NAD-capped RNA hydrolase DXO1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB947C1)

HSP 1 Score: 140 bits (354), Expect = 8.890e-36
Identity = 83/207 (40.10%), Postives = 123/207 (59.42%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQK-WEIQVFKEGGVIYLEV--MSDRNRGMMDRT-SYWGRRFETLCVLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGR--FVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DL+ G+  ++E     +     ++L          E+ HF+TYRNNLNKI+   Y + + WE+ V K  GV+YL+V  + +R RG  DR  SYWG  FETL     E  R D+ +   +  A   Y A+ ++ LG+H +LMGAE+D C   + G+  +VE+KT+R + D + E+ F+K K LK+W+Q +LAGV  +V+GYRDD G
Sbjct:  250 GADLSQGFDTFIEKKDLGAQG-FGDLLSCIRNKRIPLENMHFVTYRNNLNKIMATAYLRHEPWEMGVHKRKGVVYLDVHKLPERPRGDRDRLMSYWGYCFETLAT---EDPRRDDGEGIHDVDANVEYCAVIKTKLGAHRILMGAEMDCCDSTDDGKRFYVELKTSREL-DYRTEERFEKEKLLKFWIQSFLAGVPYIVIGYRDDKG 451

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: A0A251VAT4_HELAN (Decapping nuclease n=2 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251VAT4_HELAN)

HSP 1 Score: 138 bits (348), Expect = 7.760e-35
Identity = 83/207 (40.10%), Postives = 121/207 (58.45%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQK-WEIQVFKEGGVIYLEV--MSDRNRGMMDRT-SYWGRRFETLCVLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGR--FVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DLN G+  ++E     S     ++L          ++ HF+TYRNNLNKI+   Y + + WE+ V K  GV+YL+V  + +R R   DR  SYWG  FETL     E  R D+ +   +  A   Y A+ ++ LG+H +LMGAE+D C   + GR  +VE+KT+R + D   E+ F++ K LK+W+Q +LAGV  +V+GYRDD G
Sbjct:  270 GADLNQGFDTFIEKKDLGSQG-FGDLLACIRNKNIPLQNMHFVTYRNNLNKIMATAYLRHEPWEMGVHKRKGVVYLDVHKLPERPRSERDRRMSYWGYCFETLAT---EDPRRDDGEGIHHVDANVEYCAVIKTKLGAHRILMGAEMDCCDSTDDGRRFYVELKTSREL-DYHTEERFEREKLLKFWIQSFLAGVPFIVIGYRDDAG 471

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: A0A7J6XBB6_THATH (Decapping nuclease n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6XBB6_THATH)

HSP 1 Score: 135 bits (339), Expect = 2.300e-34
Identity = 79/207 (38.16%), Postives = 118/207 (57.00%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQK-WEIQVFKEGGVIYLEV--MSDRNRGMMDRTS-YWGRRFETLCVLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGR--FVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DLN G+  ++      S     ++L          E+ HF+TYRNNLNKIL   Y K + WE+ V K  GV+YL+V  + ++ +   DR   YWG  FE L     + AR+D       D A   + ++ ++ LG+H ++MGAE+D C   + GR  +VE+KT+R + D   E  F++ K LK+W+Q +LAGV  +VVG+RDD+G
Sbjct:  119 GADLNEGFETFIAKRDLGSQG-FGDLLASIRNKNIPLENIHFVTYRNNLNKILATAYIKHEPWEMGVHKRNGVVYLDVHKLPEKPQSHKDRQRCYWGYSFENLAT--EDSARIDGEGMHSID-ANVEFCSVIKTKLGAHRIIMGAEMDCCDSTDDGRRFYVELKTSREVLDYNTEVYFEREKLLKFWIQSFLAGVPYIVVGFRDDNG 321

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: UPI00125D723C (decapping nuclease DXO homolog, chloroplastic n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D723C)

HSP 1 Score: 135 bits (339), Expect = 1.140e-33
Identity = 78/210 (37.14%), Postives = 121/210 (57.62%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQK-WEIQVFKEGGVIYLEV--MSDRNRGMMDRTS-YWGRRFETLCVLGV---EGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGR--FVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DLN G+  + E     S     ++L          +  HF+TYRNNLNKI+   Y + + WE+ V K  GV+YL+V  + +R +  +DR   YWG  FE+L        +G R+ ++       A   Y A+ ++ +G+H +LMGAE+D C   + GR  +VE+KT+R + D + E+ F++ K LK+W+Q +LAGV  +VVG+RDD+G
Sbjct:  241 GSDLNEGFDTFTEKRDLGSQG-FGDLLACIRNKNIPLDRMHFVTYRNNLNKIMATAYIRNEPWEMGVHKRKGVVYLDVHKLPERPKSELDRRRCYWGYCFESLATEDPGRSDGDRIHDID------ANVEYCAVIKTKIGAHRILMGAEMDCCDSRDDGRRFYVELKTSRELLDHRTEEKFEREKLLKFWIQSFLAGVPYIVVGFRDDNG 443

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: UPI001CFBC52A (NAD-capped RNA hydrolase DXO1 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFBC52A)

HSP 1 Score: 134 bits (336), Expect = 2.820e-33
Identity = 81/207 (39.13%), Postives = 120/207 (57.97%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQK-WEIQVFKEGGVIYLEV--MSDRNRGMMDRTS-YWGRRFETLCVLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGR--FVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DLN GY  ++E     S     ++L          ++ HF+T+RNNLNKIL   Y + + WE+ V K  GV+Y++V  + +R +  +DR   YWG  FE+L     E  R  + +   N  A   Y A+ ++ LG+H LLMGAE+D C   + GR  +VE+KT+R + D   E+ ++K K LK+W+Q +LAGV  +VVG+RDD G
Sbjct:  238 GADLNQGYDTFIEKKDLGSEG-FGDLLACIRDKNIPLQNMHFVTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYVDVHKLPERPKSELDRRRCYWGYCFESLAT---EDPRRADGEGIHNVDANVEYCAVIKTKLGAHRLLMGAEMDCCDSTDEGRRFYVELKTSREL-DYHTEERYEKEKLLKFWIQSFLAGVPFIVVGFRDDSG 439

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: A0A1D1XXH3_9ARAE (Decapping nuclease n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XXH3_9ARAE)

HSP 1 Score: 130 bits (327), Expect = 3.330e-33
Identity = 78/212 (36.79%), Postives = 123/212 (58.02%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQK-WEIQVFKEGGVIYLEV--MSDRNRGMMDRTS-YWGRRFETLCV-----LGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGR--FVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DLN G+ +++E     S     ++L          ++ HF+TYRNNLNKIL   Y + + W++ V K  GV+YL+V  + +R +  +DR   YWG  FE L       LGV+G  +D         A   + ++ R+ LG+H ++MGAE+D C   + G+  +VE+KT+R + D + E+ F++ K LK+W+Q +LAGV  +V+G+RDD G
Sbjct:   53 GADLNVGFESFIEKRELGSQG-FGDLLACIRNKNILLQNIHFVTYRNNLNKILATAYMRSEPWKMGVHKRSGVVYLDVHKLPERPQTELDRRRCYWGYSFENLATEGSRDLGVDGHGID---------ANVEFCSVIRTKLGAHRIIMGAEMDCCDSPDDGKRFYVELKTSREL-DYRTEERFEREKLLKFWIQSFLAGVPYIVIGFRDDTG 253

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: A0A2J6LFN2_LACSA (Decapping nuclease n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6LFN2_LACSA)

HSP 1 Score: 134 bits (336), Expect = 3.660e-33
Identity = 80/207 (38.65%), Postives = 120/207 (57.97%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPYSKQK-WEIQVFKEGGVIYLEV--MSDRNRGMMDRTS-YWGRRFETLCVLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNNPGR--FVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DLN G+  ++E     S     ++L          ++ HF+TYRNNLNKIL   Y + + WE+ V K  GV+YL+V  + +R +  +DR   YWG  FETL     E    D+ +   +  A   Y ++ ++ LG+H +LMGAE+D C   + GR  +VE+KT+R + D   E+ F++ K LK+W+Q +LAGV  +V+GYRDD G
Sbjct:  265 GADLNQGFDTFIEKKDLGSQG-FGDLLACIRSKNIPLQNMHFVTYRNNLNKILATAYLRHEPWEMGVHKRKGVVYLDVHKLPERPKSELDRRRCYWGYCFETLAT---EDPTRDDGEGIHDVNANVEYCSVIKTKLGAHRILMGAEMDCCDSTDEGRRFYVELKTSREL-DYHTEERFEREKLLKFWIQSFLAGVPYIVIGYRDDSG 466

[Close]

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Match: A0A484NM82_9ASTE (Decapping nuclease n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484NM82_9ASTE)

HSP 1 Score: 133 bits (335), Expect = 4.150e-33
Identity = 76/210 (36.19%), Postives = 120/210 (57.14%), Query Frame = 0

Query:    1 GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLNKILVAPY-SKQKWEIQVFKEGGVIYLEVMS--DRNRGMMDRTS-YWGRRFETLCV--LGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRP---NNPGRFVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDHG 201
            G DLN G+  ++E     S      +       + + E  HF+TYRNN+NKI+   Y  K+ WE+ V K  G++YL+V S  +R +  +DR   YWG  FE+L    LG +G          +  A   Y ++ ++ +G+H +LMGAE+D C     NN   ++E+KT+R + D +  +IF++ K LK+W+Q ++AGV  +VVG+RDD+G
Sbjct:  242 GADLNEGFDTFIEKRDLGSQGFGDLLACIRHNTDIQLEGIHFVTYRNNINKIMATAYIRKEPWEMGVHKRKGIVYLDVHSLPERPKSELDRRRCYWGYCFESLATEDLGRDGIH--------DVDANVEYCSVLKTKIGAHRVLMGAEMDCCDSWDNNNKRFYIELKTSRELLDHRTVEIFEREKLLKFWIQSFIAGVPFIVVGFRDDNG 443

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot

BLAST of mRNA_H-elongata_contig70497.14704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LT56_ECTSI	1.770e-123	86.63	Decapping nuclease n=1 Tax=Ectocarpus siliculosus ...	[more]
A0A6H5JPT0_9PHAE	8.990e-122	81.78	Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 131...	[more]
UPI001CB947C1	8.890e-36	40.10	NAD-capped RNA hydrolase DXO1 n=1 Tax=Erigeron can...	[more]
A0A251VAT4_HELAN	7.760e-35	40.10	Decapping nuclease n=2 Tax=Heliantheae alliance Ta...	[more]
A0A7J6XBB6_THATH	2.300e-34	38.16	Decapping nuclease n=1 Tax=Thalictrum thalictroide...	[more]
UPI00125D723C	1.140e-33	37.14	decapping nuclease DXO homolog, chloroplastic n=2 ...	[more]
UPI001CFBC52A	2.820e-33	39.13	NAD-capped RNA hydrolase DXO1 n=2 Tax=Anacardiacea...	[more]
A0A1D1XXH3_9ARAE	3.330e-33	36.79	Decapping nuclease n=1 Tax=Anthurium amnicola TaxI...	[more]
A0A2J6LFN2_LACSA	3.660e-33	38.65	Decapping nuclease n=2 Tax=Lactuca TaxID=4235 RepI...	[more]
A0A484NM82_9ASTE	4.150e-33	36.19	Decapping nuclease n=3 Tax=Cuscuta sect. Cleistogr...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013961	RAI1-like	PFAM	PF08652	RAI1	coord: 147..201 e-value: 2.0E-16 score: 59.9
IPR039039	RAI1-like family	PANTHER	PTHR12395	DOM-3 RELATED	coord: 2..201
None	No IPR available	PANTHER	PTHR12395:SF9	DECAPPING AND EXORIBONUCLEASE PROTEIN	coord: 2..201

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig70497	contig	H-elongata_contig70497:115..2680 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig70497.14704.1	mRNA_H-elongata_contig70497.14704.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig70497 115..2680 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig70497.14704.1 ID=prot_H-elongata_contig70497.14704.1|Name=mRNA_H-elongata_contig70497.14704.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
GKDLNHGYLNYVEPDTASSTSEITEMLDETPGLEREEESAHFITYRNNLN
KILVAPYSKQKWEIQVFKEGGVIYLEVMSDRNRGMMDRTSYWGRRFETLC
VLGVEGARLDELQRGPNDPARPSYFALFRSWLGSHNLLMGAEIDACRPNN
PGRFVEIKTTRNIRDSKDEQIFKKHKTLKYWVQCYLAGVRDLVVGYRDDH
G

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013961	RAI1
IPR039039	RAI1-like_fam