prot_H-elongata_contig70012.14653.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70012.14653.1
Unique Nameprot_H-elongata_contig70012.14653.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length372
Homology
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: D7FT74_ECTSI (UBX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT74_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 5.600e-125
Identity = 236/410 (57.56%), Postives = 276/410 (67.32%), Query Frame = 0
Query:    1 MLFELTST----------MPVQLEGDDVGVTTASRTTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQMSELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLK-------------------VVELRPEAQVTLIDTDMELELDLPEEAREQLEEQGARDRGKTLRAHMDAKS-SSGSASPVQSLSPTSK----ATGAGSAXXXXXXXXXXATGKDIFAMSD-DGEDDSDLDLDDEQAK----KESAFDPSKHRLSMLKQLPEEPPLGENGVFTCQLRSPGGKHTRRFRFEDGVGVLLDFAEAQGGIPGHYRIVVPFPRRVLTRDEAALGMTLREAGLTSKQESVILERV 371
            MLFELT T           P +      G  T +RTTHAGVLEFVADEGTIGLPRKV+ SLL   G +  + PS     + + ++  E    +   + G   + VRYVRLAKATFARVVPET+GLSQ+SELRAMLE N+RNHATLTVGD LSVWRRGKEF LK                   VVELRPE QVT+IDTDME+ELDLPE+AREQL+E+GA+DR KTLRAHM A + SS  +SP QSLSP       A G   +           TG  +  M D + +DDSDLD DDE++     K+ AFD  KHRL+  +QLPEEPP  E GVFTCQLR+  GK TRRFRF D +GVLLDF EAQGG+PG YR+V+PFPRRVLTRD+A+ G TL EAGLTSKQESVILER+
Sbjct:  117 MLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRTTHAGVLEFVADEGTIGLPRKVVLSLL---GAAAHQVPSRTSDENISANDDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSLKSEDSHSPLTPEREPPLTMQVVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATISSRGSSPTQSLSPPPSGRGYAVGGKGSSVAAGGRDTSTTG--LSPMDDSESDDDSDLDSDDERSTPGGPKKGAFDLEKHRLAKFQQLPEEPPRDEEGVFTCQLRTTEGKFTRRFRFADALGVLLDFCEAQGGVPGQYRLVMPFPRRVLTRDDASAGTTLHEAGLTSKQESVILERL 521          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: A0A7S3XVE0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVE0_HETAK)

HSP 1 Score: 126 bits (317), Expect = 1.100e-31
Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 0
Query:   23 ASRTTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPS-EPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQMSELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTD 169
            A+ TTH GVLEF A+EG +GLP KV+ SL +   Q   +     P SV                     G ++++Y+RL KATFA++ PE  GLSQ+ E+RA+LE N+RNHATL++GD+L VW RGK F  +V+ELRP A  T+IDTD
Sbjct:   11 AAGTTHCGVLEFTAEEGCVGLPPKVLASLGIAPEQDNTQHQGVAPSSV---------------------GQVQIKYIRLEKATFAKIRPEKAGLSQIDEIRAVLEHNMRNHATLSLGDKLIVWFRGKAFECEVLELRPAAACTVIDTD 137          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: W7T6G4_9STRA (Ubiquitin fusion degradaton n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6G4_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.090e-29
Identity = 129/387 (33.33%), Postives = 180/387 (46.51%), Query Frame = 0
Query:    1 MLFELTSTMPVQLEGD-DVGVTTASRTTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQMSELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTDMELELDLPEEA--REQLEEQGARDRGKTLRAHMDAKSSSGSASPVQSLSPTSKATGAGSAXXXXXXXXXXATGKDIFAMSDDGEDDSDLDLDDEQAKKESAFDPSKHRLSM----LKQLPEEPPLGENGVFTCQLRSPGGKH-TRRFRFEDGVGVLLDFAEAQGGIPGH------YRIVVPFPRRVLTRDEAA---LGMTL-REAGLTSKQESVILE 369
            MLF+L S +P   EG+    +   +R THAGVLEF A++G IGLP KV +SL     ++  +G S           G E   R+ +       +RV+YVRL K T+A+V P T  L  + EL+ MLE NL+NHATL+ GD L VW RG+ F L+V+ L P   VT+IDTD+ +++++PEE   RE++E++ + D G      +      G   P  S S  S+   AG                                   E++   S     + R SM    L +L  EP  G        +R P G   +RRF        +  F EA      H      YR+V  FPRRV T  E A   +G  L  EAG   K+E+++ E
Sbjct:    1 MLFQL-SLLPA--EGNKSKQLPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDG-SRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTERERVEKRLSTDAGGVKGQVVGG----GGPPPRVSQSCESRGQEAGM----------------------------------EESSVNSGAKEEERRKSMIAAQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDRLHMTYRLVTRFPRRVFTVGETAAQSVGEVLGSEAG---KRETLMYE 342          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: A0A4D9CT31_9STRA (UBX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT31_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.090e-27
Identity = 126/386 (32.64%), Postives = 185/386 (47.93%), Query Frame = 0
Query:    1 MLFELTSTMPVQLEGD-DVGVTTASRTTHAGVLEFVADEGTIGLPRKVMQSLLVT---SGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQMSELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTDMELELDLPEEA--REQLEEQGARDRGKTLRAHMDAKSSSGSASPVQSLSPTSKATGAGSAXXXXXXXXXXATGKDIFAMSDDGEDDSDLDLDDEQAKKESAFDPSKHRLSMLKQLPEEPPLGENGVFTCQLRSPGGKH-TRRFRFEDGVGVLLDFAEAQGGIPGH------YRIVVPFPRRVLTRDEAA---LGMTL-REAGLTSKQESVILE 369
            MLF+L S +P   EG+    +   +R THAGVLEF A++G IGLP KV +SL+     + + G+ G  E        +    A    G+G      +RV+YVRL K T+A+V P T  L  + EL+ MLE NL+NHATL+ GD L VW RG+ F L+V  L P   VT+IDTD+ +++++PEE   RE+ E + + D G      +      G   P   +S + ++ G                G +  +++   +++       E+ K+  A        + L +L  EP  G        +R P G   +RRF        +  F EA      H      YR+V  FPRRV T  E A   +G  L  EAG   K+E+++ E
Sbjct:  113 MLFQL-SLLPA--EGNKSKQLPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLVAEPEETREDGSRGMKERVEGPGGEEGDSRASPAWGSGWK----VRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVTGLEPTQAVTVIDTDLTVDVEVPEEQTEREREESRLSADAGGVKGQVV------GGGGPPPHVSQSCESRG-------------QEAGMEEPSVNSGAKEE-------ERRKRMMA--------TQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDPLDMTYRLVTRFPRRVFTVGETAAQSVGEVLGSEAG---KRETLMYE 454          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: A0A8J9WSW7_9CHLO (Probable ubiquitin recognition factor in ER-associated degradation n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WSW7_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 3.600e-23
Identity = 116/356 (32.58%), Postives = 165/356 (46.35%), Query Frame = 0
Query:   22 TASRTTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQM--SELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTDMELELDLPEEAREQLEEQGARDRGKTLRAHMDAKSSSGSASPVQSLSPTSKATGAGSAXXXXXXXXXXATGKDIFAMSDDGEDDSDLDLDDEQAKKESAFDPSKHRLSMLKQLPEEPPLGENGVFTCQLRSPGG-KHTRRFRFEDGVGVLLDFAEAQGGI---PGHYRIVVPFPRRVLTRDEAALGMTLREAGLTSKQESVILERV 371
            T+  TTHAGVL F A EGT+G+P +V +++         +G S PH      DN                 + V Y +L K  + R  P T    +    ++RA+LE  L  H+TL+ GD +SV   G+ F L V +LRP   V++IDT+ME E++   E  ++L  + A  R +  R H             Q L+  +        XXXXXXXXXX                       E+ ++E A             LP EP  GE  V +C +R P G + +RRFR  D +  L DF ++Q G    PG Y++V  FPRRV+     A   TL + GL S+QE ++LE +
Sbjct:  133 TSGSTTHAGVLAFTAAEGTVGMPPQVARNVF-------GDGASAPH------DNA---------------TVDVLYRKLPKGEYVRFQPRTADFQKEVGPDVRAVLEAALERHSTLSEGDWISVPFAGRTFDLTVQKLRPGRAVSVIDTEMEAEVEPSLETEQRLAAEEAA-RAEAQRKH------------EQELATMAXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------ERLRQEKAA-----------ALPPEPAAGEAAVTSCLIRLPNGARFSRRFRASDPLLHLFDFVDSQEGAGDGPGSYKLVAQFPRRVIGPHLPAPDATLADVGLASQQEVLLLEPI 423          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: I0YPZ2_COCSC (UBX domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPZ2_COCSC)

HSP 1 Score: 99.8 bits (247), Expect = 1.260e-19
Identity = 117/372 (31.45%), Postives = 163/372 (43.82%), Query Frame = 0
Query:   23 ASRTTHAG-----------------VLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGI-IRVRYVRLAKATFARVVPETIGLSQM--SELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTDMELELDLPEEAREQLEEQGARDRGKTLRAHMDAKSSSGSASPVQ-SLSPTSKATGAGSAXXXXXXXXXXATGKDIFAMSDDGEDDSDLDLDDEQAKKESAFDPSKHRLSMLKQLPEEPPLGENGVFTCQLRSPGG-KHTRRFRFEDGVGVLLDFAEAQGGI---PGHYRIVVPFPRRVLTRDEAALGMTLREAGLTSKQESVILE 369
            +  TTHAG                 VL F A EGTIG+P +V ++                            AFG  GA +  +G  + V Y RL K  + R  P +    +    ++RA+LE  L  H+TL+ GD +SV   G  F L V +LRP   V++IDT+ME E++   E  ++L ++ A       RA  D +     A+  Q +L   ++A     A XXXXXX                                +A D  + R      LP EPP  E  V +C +R P G + +RRFR  D +  L DF +AQ G    PG YR+V  FPRRV+     A   TL + GL S+QE ++LE
Sbjct:   92 SGNTTHAGASLCRLMLELQPKRPLCVLAFTAAEGTIGMPPQVARN----------------------------AFG-DGASVSPEGATVDVLYRRLPKGEYVRFQPWSADFQREVGGDVRAVLEAALERHSTLSEGDWISVPFAGTAFDLTVQKLRPGRAVSVIDTEMEAEVEPSLETEQRLAQEEA------ARAEADRRREQELAAMAQEALRQAAEAEEREKAEXXXXXX--------------------------------AAVDLERLRQEKAAALPPEPPADE-AVTSCLIRLPNGARFSRRFRASDPLLHLFDFVDAQEGAGEGPGSYRLVAQFPRRVIGPHLPAPDATLADVGLASRQEVLLLE 395          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: K3WWI9_GLOUD (UBX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWI9_GLOUD)

HSP 1 Score: 96.7 bits (239), Expect = 3.090e-18
Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 0
Query:   20 VTTASRTTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQMS-ELRAMLEQNLRNHATLTVGDRLSVWRRGKE-FHLKVVELRPEAQVTLIDTDMELELDLPEEA 180
            +T  +R THAGVLEFVA+EGT+GLP KV  SL    G S       P ++                        +V+Y+RL K  FA + P  +G  +   + + +LE++L+ H TLTVGD L V R GKE F + V EL+PEA V +++TD+E+ L LP EA
Sbjct:  125 LTQTTRKTHAGVLEFVAEEGTVGLPPKVAASLFRNLGGSSNSVGQVPEAI------------------------QVKYIRLEKGKFASLQPRGVGFGEREIDFKKILERSLKAHTTLTVGDVLFV-RHGKETFEVLVAELQPEAAVNILNTDLEVAL-LPSEA 261          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: A0A5K1FDC0_9MAGN (Uncharacterized protein (Fragment) n=3 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1FDC0_9MAGN)

HSP 1 Score: 95.9 bits (237), Expect = 3.600e-18
Identity = 59/163 (36.20%), Postives = 90/163 (55.21%), Query Frame = 0
Query:   24 SRTTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQMSELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTDMELELDLPEEAREQLEE 186
            +RTTH GVLEF A EG++ LP  +  +L              P  VD                     +I VRYVRL K T+A++ P+TIG S +   +A+LE +LR HATL+ GD L+V   G  + LKV+EL+P + V++++TD+E+++  P    E +++
Sbjct:   75 NRTTHCGVLEFTAAEGSVELPPHIWTNLF-------------PIPVDNTP------------------LIEVRYVRLPKGTYAKLQPDTIGFSDIPNHKAVLETSLRQHATLSQGDILTVNHGGLSYKLKVLELKPSSSVSVLETDVEVDIVEPSSTSESVDQ 206          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: A0A5J5A6M5_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5A6M5_9ASTE)

HSP 1 Score: 93.6 bits (231), Expect = 6.790e-18
Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 0
Query:   26 TTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQMSELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTDMELELDLPEEARE 182
            TTHAGVLEF ++EG++GLP  V  +L           P++P                         +I VRYV L K T+A++ P+  G S +   +A+LE +LR HATL+  D L+V      +HL+V+EL+P + V++++TD+E+++  P+ A E
Sbjct:   87 TTHAGVLEFTSEEGSVGLPPHVWSNLF----------PADPPKTS---------------------LIEVRYVWLPKGTYAKLQPDEFGFSDIPNHKAVLETSLRQHATLSQDDMLTVNHGALAYHLRVLELKPSSSVSVLETDIEVDIVGPDSASE 212          
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Match: A0A5J4XK30_9CHLO (UBX domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XK30_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 8.240e-18
Identity = 98/360 (27.22%), Postives = 163/360 (45.28%), Query Frame = 0
Query:   21 TTASRTTHAGVLEFVADEGTIGLPRKVMQSLLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRLAKATFARVVPETIGLSQM--SELRAMLEQNLRNHATLTVGDRLSVWRRGKEFHLKVVELRPEAQVTLIDTDMELELDLPEEAREQL--EEQGARDRGKTLRAHMDAKSSSGSASPVQSLSPTSKATGAGSAXXXXXXXXXXATGKDIFAMSDDGEDDSDLDLDDEQAKKESAFDPSKHRLSMLKQLPEEPP-LGENGVFTCQLRSPGG-KHTRRFRFEDGVGVLLDFAEAQG--GIP-GHYRIVVPFPRRVLTRDEAAL-GMTLREAGLTSKQESVILER 370
            T+A R+ HAGVL+F A +GT+G+P  ++++L    G +  +G    H +                         V Y +L+K T+ R  P + G  +     +  +L+ ++  H+TLT G+ + V   G    LKV+ L+PE  V++I+TD+E E+D   E  ++L  EE+ A+ R +T++                                        A  + I              + D   ++++  D  + +L     LP EP    E    +C  R P G + +RRF       +L DFA+A+G  G+P G YR+V+ FPRRV+  D A +   ++ EAGL++ QE ++ ER
Sbjct:  132 TSAGRSLHAGVLDFSAAQGTVGVPEHLIRNLW---GLTTGDGQCHGHVI-------------------------VTYRKLSKGTYVRFQPRSAGFQEEVGDGVEQVLQASMFTHSTLTQGEWVQVSYAGTLHDLKVLALKPEPAVSIIETDLEAEVDPSVETEDKLRAEEELAQQRLETMQR---------------------------------------AEEESIRRA-----------MQDANLREQAQADRQRMQLEKEALLPPEPSGNAEQPTVSCLFRMPDGTRASRRFFQSQPAQLLFDFADARGAGGLPFGGYRLVMQFPRRVV--DPAMIQSRSIAEAGLSAGQEVLLFER 411          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70012.14653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT74_ECTSI5.600e-12557.56UBX domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3XVE0_HETAK1.100e-3147.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7T6G4_9STRA2.090e-2933.33Ubiquitin fusion degradaton n=1 Tax=Nannochloropsi... [more]
A0A4D9CT31_9STRA2.090e-2732.64UBX domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A8J9WSW7_9CHLO3.600e-2332.58Probable ubiquitin recognition factor in ER-associ... [more]
I0YPZ2_COCSC1.260e-1931.45UBX domain-containing protein n=1 Tax=Coccomyxa su... [more]
K3WWI9_GLOUD3.090e-1840.49UBX domain-containing protein n=1 Tax=Globisporang... [more]
A0A5K1FDC0_9MAGN3.600e-1836.20Uncharacterized protein (Fragment) n=3 Tax=Nymphae... [more]
A0A5J5A6M5_9ASTE6.790e-1835.03Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
A0A5J4XK30_9CHLO8.240e-1827.22UBX domain-containing protein n=1 Tax=Trebouxia sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.330.10coord: 102..175
e-value: 9.0E-16
score: 59.6
NoneNo IPR availableGENE3D3.10.20.90coord: 291..370
e-value: 4.9E-15
score: 57.2
IPR042299Ufd1-like, Nn domainGENE3D2.40.40.50coord: 1..60
e-value: 1.1E-8
score: 36.5
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 91..177
e-value: 8.9E-19
score: 67.6
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 1..245
IPR001012UBX domainPFAMPF00789UBXcoord: 295..369
e-value: 1.3E-4
score: 22.1
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 280..368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70012contigH-elongata_contig70012:1223..2691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70012.14653.1mRNA_H-elongata_contig70012.14653.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70012 1061..3169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70012.14653.1 ID=prot_H-elongata_contig70012.14653.1|Name=mRNA_H-elongata_contig70012.14653.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp
MLFELTSTMPVQLEGDDVGVTTASRTTHAGVLEFVADEGTIGLPRKVMQS
LLVTSGQSGAEGPSEPHSVDAARDNGWEAFGRKGAGILGDGIIRVRYVRL
AKATFARVVPETIGLSQMSELRAMLEQNLRNHATLTVGDRLSVWRRGKEF
HLKVVELRPEAQVTLIDTDMELELDLPEEAREQLEEQGARDRGKTLRAHM
DAKSSSGSASPVQSLSPTSKATGAGSAARGGGGGATGATGKDIFAMSDDG
EDDSDLDLDDEQAKKESAFDPSKHRLSMLKQLPEEPPLGENGVFTCQLRS
PGGKHTRRFRFEDGVGVLLDFAEAQGGIPGHYRIVVPFPRRVLTRDEAAL
GMTLREAGLTSKQESVILERV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042299Ufd1-like_Nn
IPR004854Ufd1-like
IPR001012UBX_dom
IPR029071Ubiquitin-like_domsf