prot_H-elongata_contig689.14531.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.500e-23 Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D F+A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+
Sbjct: 8 MIIVIYVDDILVAGSDE-DFEEFLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 151
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 3.390e-21 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+
Sbjct: 215 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 358
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 4.970e-21 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+
Sbjct: 928 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 1071
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 4.970e-21 Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P RKA+G +MW +T +R D++ A AV R + P H A KI+
Sbjct: 1037 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKIL 1180
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 5.060e-21 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+
Sbjct: 1307 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 1450
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 5.070e-21 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+
Sbjct: 1327 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 1470
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 5.090e-21 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+
Sbjct: 1470 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 1613
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 8.690e-21 Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+
Sbjct: 563 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 706
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.260e-20 Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0
Query: 1 MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P K A KI+
Sbjct: 72 MIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP---VKSAIQKIL 212
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A182H216_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H216_AEDAL) HSP 1 Score: 94.7 bits (234), Expect = 2.290e-20 Identity = 52/153 (33.99%), Postives = 89/153 (58.17%), Query Frame = 0
Query: 3 VVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPSKADEPWNPKVK---KEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM 152
+ I++DD + +T D R L +F++KD+G Y +G I RN++ EL+IDQ Y+E +++ F++ P ++ + + D+ PK + +EM++ PY++AVG L + A TR DI+ AV AV++FS PG H +A +I+
Sbjct: 4 ITIYVDDFLIFTNDAKMRKRLKTFLCNRFRMKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLTDCH--PVSTPFESSERLDKSMTPKSQDEIEEMKKVPYKEAVGCLQYIAQATRPDISFAVNAVSQFSSNPGRKHWEAVKRIL 154 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig689.14531.1 ID=prot_H-elongata_contig689.14531.1|Name=mRNA_H-elongata_contig689.14531.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|