prot_H-elongata_contig67961.14410.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67961.14410.1
Unique Nameprot_H-elongata_contig67961.14410.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 75.1 bits (183), Expect = 1.040e-13
Identity = 36/88 (40.91%), Postives = 59/88 (67.05%), Query Frame = 0
Query:    9 EPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            EP +  +AM+SP+W +W KA EK MR + ++  Y  V   ++  VVG+K +++ K   +GK+E+YK RLVAQGF Q+ G+ + + ++P
Sbjct:  959 EPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAP 1046          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A1X7VXK3_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VXK3_AMPQE)

HSP 1 Score: 68.6 bits (166), Expect = 2.640e-12
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    9 EPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKY 94
            EP    +A+ S E D+W +A E+ M  +  N VY  V   K+K V+G+K +++RK+  DG VE YK RLVAQ F Q  G+ Y E +
Sbjct:    5 EPSTINEALSSSEADKWKEAMEREMESLKANDVYDLVELPKNKEVIGSKWIFRRKINADGSVERYKARLVAQRFSQTHGLDYDETF 90          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: Q8WRX5_ANOGA (Pol polyprotein (Fragment) n=2 Tax=Anopheles gambiae TaxID=7165 RepID=Q8WRX5_ANOGA)

HSP 1 Score: 68.9 bits (167), Expect = 1.500e-11
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    9 EPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            EP    +AM  P+ D W +A E+ ++ + EN  ++  +  KD+  VG+K ++KRK+  DGK+  YK RLVA+GF QV G  Y E ++P
Sbjct:  428 EPRTFEEAMSCPDRDLWKRAMEEEIKSLHENATWEIASLPKDRKAVGSKWVFKRKMDGDGKIVQYKARLVAKGFSQVYGADYDEVFAP 515          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 68.6 bits (166), Expect = 2.060e-11
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    7 IPEPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            I EPIN  +A       EW +A +     ++EN  ++ V+  K K VVG+K ++K K  ++G V+ YK RLVAQG+ Q EGV Y+E +SP
Sbjct:  807 INEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSP 896          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 67.8 bits (164), Expect = 3.840e-11
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    7 IPEPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            I EPIN  +A       EW +A +     ++EN  ++ V+  K K VVG+K ++K K  ++G V+ YK RLVAQG+ Q EGV Y+E +SP
Sbjct:  720 INEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSP 809          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A224X581_9HEMI (Putative polyprotein (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X581_9HEMI)

HSP 1 Score: 67.8 bits (164), Expect = 3.880e-11
Identity = 33/86 (38.37%), Postives = 57/86 (66.28%), Query Frame = 0
Query:   11 INRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            +  + A+ S E DEW+ A  + ++ +++N  +K V+R +D+ V+G++I+ + K   DG +E  K RLVAQGF Q  GVH++E ++P
Sbjct:  794 VPMKSALSSSEADEWFNAMMEEIKSVIKNKTWKIVSRPEDQHVIGSRIVLRNKYKPDGTLERRKARLVAQGFSQKPGVHFSETFAP 879          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A2Z6N1U2_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N1U2_TRISU)

HSP 1 Score: 67.4 bits (163), Expect = 5.290e-11
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    9 EPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDG-KVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            EP N R+A ES E  +W KA  + M  + +N  +K V+  K+K VVG+K ++K+K G  G +   YK RLV +GF QVEG+ Y E +SP
Sbjct:  814 EPKNFRKASESMEGKDWLKAMNEEMLSLEKNQTWKLVSLPKNKRVVGSKWVFKKKEGIPGVEAPRYKARLVVKGFTQVEGIDYNEIFSP 902          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A2N5TZ29_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5TZ29_9BASI)

HSP 1 Score: 67.0 bits (162), Expect = 7.070e-11
Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    9 EPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            EP NR QAM S + D+W +AE K +  M  + V+ ++ RQ +   + +   Y++K+G D KV  +K R+ AQGF Q  G+++  KY+P
Sbjct:  245 EPGNRAQAMSSDDRDQWAEAELKELENMFSHSVWDKIPRQPNHHTIPSTWAYRKKLGSDNKVVEFKARICAQGFRQTHGLNFDLKYAP 332          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 67.0 bits (162), Expect = 7.230e-11
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   10 PINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            P   +QA ESPEW  W  A E+    +++   ++     +++ +VG++ ++ +K  + GKV  YK RLVAQGF Q+ GV YT+ YSP
Sbjct:  855 PKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSP 941          
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Match: A0A438HB43_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HB43_VITVI)

HSP 1 Score: 65.1 bits (157), Expect = 1.170e-10
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    9 EPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKDKLVVGTKILYKRKVGQDG-KVENYKCRLVAQGFWQVEGVHYTEKYSP 96
            EP   ++A+ S E D+W KA ++ M  + +N  ++ V + KD+ VVG+K ++KRK G  G +   YK RLVA+GF Q EGV Y E +SP
Sbjct:   94 EPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSP 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67961.14410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GQU1_9APHY1.040e-1340.91Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A1X7VXK3_AMPQE2.640e-1243.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q8WRX5_ANOGA1.500e-1140.91Pol polyprotein (Fragment) n=2 Tax=Anopheles gambi... [more]
A0A7D9D6Q5_PARCT2.060e-1142.22Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9HXK4_PARCT3.840e-1142.22Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A224X581_9HEMI3.880e-1138.37Putative polyprotein (Fragment) n=1 Tax=Panstrongy... [more]
A0A2Z6N1U2_TRISU5.290e-1144.94Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A2N5TZ29_9BASI7.070e-1138.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM7.230e-1139.08Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A438HB43_VITVI1.170e-1043.82Retrovirus-related Pol polyprotein from transposon... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 41..96
e-value: 1.7E-8
score: 34.4
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 9..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67961contigH-elongata_contig67961:3015..3302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67961.14410.1mRNA_H-elongata_contig67961.14410.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67961 3015..3302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67961.14410.1 ID=prot_H-elongata_contig67961.14410.1|Name=mRNA_H-elongata_contig67961.14410.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
MKATPYIPEPINRRQAMESPEWDEWWKAEEKNMRGMVENCVYKQVARQKD
KLVVGTKILYKRKVGQDGKVENYKCRLVAQGFWQVEGVHYTEKYSP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2