prot_H-elongata_contig66662.14270.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66662.14270.1
Unique Nameprot_H-elongata_contig66662.14270.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: D7G2C5_ECTSI (Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C5_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 5.820e-42
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPV++CSVTTNEASQLKSQI+TLKDQIEQLLI
Sbjct:   56 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: A0A7S2FW40_9STRA (Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2FW40_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.060e-39
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            +AADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVT+NEASQLK QI T+KD IEQLLI
Sbjct:   54 LAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTSNEASQLKDQIQTMKDNIEQLLI 126          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: A0A835Z1Z7_9STRA (Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z7_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.190e-39
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAADA+PLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIS SVTTNEASQLK QI +LKDQIEQLLI
Sbjct:   55 MAADADPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISASVTTNEASQLKEQIQSLKDQIEQLLI 127          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: L1I7R9_GUITC (Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 RepID=L1I7R9_GUITC)

HSP 1 Score: 129 bits (325), Expect = 2.880e-37
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAAD EPLEILLHLPLLCEDKNVPYVFVPSK ALGRACGVSRPVI+ SVTTNE SQLK QI TLKDQIE+LLI
Sbjct:   54 MAADTEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRPVIAASVTTNEGSQLKGQIQTLKDQIEKLLI 126          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: A0A7S1CD40_9STRA (Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD40_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.350e-37
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            + ADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI+CS+TTNE SQLK QI T+KD IE+LLI
Sbjct:   59 LTADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIACSITTNEGSQLKPQINTMKDAIERLLI 131          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: R1DGQ0_EMIHU (Ribonucloprotein n=4 Tax=Prymnesiophyceae TaxID=2608131 RepID=R1DGQ0_EMIHU)

HSP 1 Score: 129 bits (324), Expect = 4.220e-37
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAADAEPLEILLHLPLLCEDKNVPYVFVP+K ALGR+CGVSRPVISCS+TTNE SQLK+QI  LKD IE+LLI
Sbjct:   55 MAADAEPLEILLHLPLLCEDKNVPYVFVPNKQALGRSCGVSRPVISCSITTNEGSQLKNQIQQLKDSIEKLLI 127          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: A0A7S2XVU5_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVU5_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.900e-37
Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAADAEPLEILLHLPLLCEDKNVPYVFVPSK+ALGRACGVSRPVI+ S+TTNEASQLK QI   KD IEQLLI
Sbjct:   60 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKIALGRACGVSRPVIAASITTNEASQLKEQIQRTKDAIEQLLI 132          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: A0A5J4Z9E3_PORPP (Ribonucloprotein n=2 Tax=Porphyridiaceae TaxID=2799 RepID=A0A5J4Z9E3_PORPP)

HSP 1 Score: 129 bits (323), Expect = 5.640e-37
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAADAEPLEILLHLPLLCEDKNVPYVFVPSK ALGRACGVSR VI+CSVT+NE SQLKSQI+ L+DQIE+LLI
Sbjct:   53 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRHVIACSVTSNEGSQLKSQILNLRDQIEKLLI 125          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: SNU13_YARLI (13 kDa ribonucleoprotein-associated protein n=5 Tax=Saccharomycetales TaxID=4892 RepID=SNU13_YARLI)

HSP 1 Score: 128 bits (321), Expect = 1.170e-36
Identity = 62/73 (84.93%), Postives = 70/73 (95.89%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAADAEP+EILLHLPLLCEDKNVPY+FVPSKVALGRACGVSRPVIS SVT+N+ASQLK QI+ +KD+IE+LLI
Sbjct:   54 MAADAEPIEILLHLPLLCEDKNVPYIFVPSKVALGRACGVSRPVISASVTSNDASQLKDQIIQMKDKIERLLI 126          
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Match: M4EKZ7_BRARP (Ribonucloprotein n=1 Tax=Brassica rapa subsp. pekinensis TaxID=51351 RepID=M4EKZ7_BRARP)

HSP 1 Score: 127 bits (318), Expect = 1.370e-36
Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIMTLKDQIEQLLI 73
            MAADAEPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NEASQLKSQI  LKD IE+LLI
Sbjct:   24 MAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQQLKDAIEKLLI 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66662.14270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C5_ECTSI5.820e-4295.89Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A7S2FW40_9STRA1.060e-3991.78Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 ... [more]
A0A835Z1Z7_9STRA2.190e-3993.15Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303... [more]
L1I7R9_GUITC2.880e-3789.04Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 ... [more]
A0A7S1CD40_9STRA3.350e-3786.30Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 T... [more]
R1DGQ0_EMIHU4.220e-3786.30Ribonucloprotein n=4 Tax=Prymnesiophyceae TaxID=26... [more]
A0A7S2XVU5_9STRA4.900e-3787.67Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID... [more]
A0A5J4Z9E3_PORPP5.640e-3787.67Ribonucloprotein n=2 Tax=Porphyridiaceae TaxID=279... [more]
SNU13_YARLI1.170e-3684.9313 kDa ribonucleoprotein-associated protein n=5 Ta... [more]
M4EKZ7_BRARP1.370e-3687.67Ribonucloprotein n=1 Tax=Brassica rapa subsp. peki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..73
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..73
NoneNo IPR availablePANTHERPTHR23105:SF131coord: 1..73
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 25..39
score: 50.61
coord: 15..25
score: 66.53
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 1..56
e-value: 7.8E-16
score: 57.6
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..73
e-value: 1.5E-28
score: 100.9
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 1..71
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 18..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66662contigH-elongata_contig66662:1136..1929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66662.14270.1mRNA_H-elongata_contig66662.14270.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66662 403..1972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66662.14270.1 ID=prot_H-elongata_contig66662.14270.1|Name=mRNA_H-elongata_contig66662.14270.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVT
TNEASQLKSQIMTLKDQIEQLLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR004037Ribosomal_L7Ae_CS