prot_H-elongata_contig65088.14095.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65088.14095.1
Unique Nameprot_H-elongata_contig65088.14095.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A6H5JB66_9PHAE (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB66_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.510e-31
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKVS 72
            MCINA+GGFKKMT FC TRVP ELM+KME+IK+DEKAVKAFGV+ G EMC A+L  GAPG HFYTLNLEKV+
Sbjct:  260 MCINAYGGFKKMTGFCLTRVPPELMAKMEEIKEDEKAVKAFGVDHGEEMCKALLAAGAPGLHFYTLNLEKVT 331          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A7S0FPW1_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FPW1_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.130e-27
Identity = 49/71 (69.01%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKV 71
            MCINA+ GFKKM  FCKTRVP  L  KME +KDD+ AVK FG+E+GAE+C  +LD GA G HFYTLNLEKV
Sbjct:  102 MCINAYAGFKKMVGFCKTRVPPSLEEKMESMKDDKDAVKQFGIEYGAEVCQKLLDAGACGLHFYTLNLEKV 172          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A7S0GG49_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GG49_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.380e-26
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKV 71
            MCINA+GGFKKMT FC+TRVP EL  KME IKD   A+K FGV++G E C  ++DGG  G HFYTLNLE+V
Sbjct:  271 MCINAYGGFKKMTQFCRTRVPVELSEKMESIKDSSSAIKEFGVQYGIESCQKLIDGGVKGLHFYTLNLERV 341          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A836C869_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C869_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.460e-26
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKVS 72
            MCINA+ GF +MT  CKTRVP EL  +ME IKDD+ A+KAFGVE+G E+C A+L  GAP  HFYTLNLEKV+
Sbjct:  261 MCINAYAGFHRMTGLCKTRVPPELRKRMEAIKDDDAAIKAFGVEYGEELCRALLKHGAPVLHFYTLNLEKVT 332          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A7S2W9Q8_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W9Q8_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.370e-25
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKV 71
            MCINA+ GFKKM  FCKTRVP  L   ME +KDD  AVK+FGVE+GAE+C A++D G  G HFYTLNLEKV
Sbjct:  269 MCINAYPGFKKMAQFCKTRVPKALEETMESLKDDAAAVKSFGVEYGAEVCQALIDFGVDGLHFYTLNLEKV 339          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A7S2M8D3_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M8D3_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.430e-24
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKV 71
            MCINA+ GFKKMT FCKTRVP  L  KM+ +KDD  A+K FGVE+GAE+C  +LD G    HFYTLNLEKV
Sbjct:  260 MCINAYPGFKKMTKFCKTRVPKALEEKMDSMKDDADAIKKFGVEYGAEVCRTLLDSGVKILHFYTLNLEKV 330          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A448YVV1_9STRA (Methylenetetrahydrofolate reductase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YVV1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.730e-24
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKVS 72
            MCINA+ GF KMT FCKTRVP+EL +KM+ +KDD  A+KAFG+EFG +MC  +++ G    HFYTLNLEK +
Sbjct:  256 MCINAYAGFVKMTKFCKTRVPTELRAKMDSLKDDSDAIKAFGIEFGTQMCQDLIEIGVDVLHFYTLNLEKTT 327          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: K0TG67_THAOC (Methylenetetrahydrofolate reductase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TG67_THAOC)

HSP 1 Score: 102 bits (254), Expect = 3.880e-24
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKV 71
            MCINA+ GFKKMT FCKTRVP +L  KM+ +KDD  AVK FGV FG+E+C ++LD G    HFYTLNLEKV
Sbjct:  260 MCINAYPGFKKMTKFCKTRVPKDLGEKMDAMKDDPDAVKKFGVTFGSEICRSLLDSGVEILHFYTLNLEKV 330          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A7S4N970_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N970_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.920e-24
Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGAPGFHFYTLNLEKV 71
            MCINA+ GF KMT FCKTRV  +L  KME +KDD  A+KAFGV+FG E+C  + + GAP  HFYTLNLEKV
Sbjct:  253 MCINAYPGFTKMTKFCKTRVTKDLRDKMESLKDDVAAIKAFGVQFGTELCRDLTEAGAPVLHFYTLNLEKV 323          
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Match: A0A1Z5JDX3_FISSO (Methylenetetrahydrofolate reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDX3_FISSO)

HSP 1 Score: 102 bits (253), Expect = 5.240e-24
Identity = 49/72 (68.06%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMCSAILDGGA-PGFHFYTLNLEKV 71
            MCINA+ GF+KMT FCKTRVP  L  KME IKDD +AVK FGV FGAEMC  ++D    P  HFYTLNLEKV
Sbjct:  248 MCINAYAGFRKMTQFCKTRVPQSLDEKMEAIKDDAEAVKEFGVTFGAEMCQGLIDSKTTPVLHFYTLNLEKV 319          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65088.14095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB66_9PHAE1.510e-3177.78Methylenetetrahydrofolate reductase (NAD(P)H) n=2 ... [more]
A0A7S0FPW1_9STRA1.130e-2769.01Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A7S0GG49_9STRA2.380e-2666.20Methylenetetrahydrofolate reductase n=1 Tax=Probos... [more]
A0A836C869_9STRA7.460e-2666.67Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A7S2W9Q8_9STRA2.370e-2567.61Methylenetetrahydrofolate reductase n=1 Tax=Eucamp... [more]
A0A7S2M8D3_9STRA1.430e-2466.20Methylenetetrahydrofolate reductase n=1 Tax=Skelet... [more]
A0A448YVV1_9STRA3.730e-2461.11Methylenetetrahydrofolate reductase n=2 Tax=Pseudo... [more]
K0TG67_THAOC3.880e-2466.20Methylenetetrahydrofolate reductase n=1 Tax=Thalas... [more]
A0A7S4N970_9STRA3.920e-2464.79Methylenetetrahydrofolate reductase n=1 Tax=Odonte... [more]
A0A1Z5JDX3_FISSO5.240e-2468.06Methylenetetrahydrofolate reductase n=2 Tax=Fistul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.220coord: 1..72
e-value: 1.0E-20
score: 75.9
NoneNo IPR availablePANTHERPTHR45754:SF25,10-METHYLENETETRAHYDROFOLATE REDUCTASEcoord: 1..71
NoneNo IPR availablePANTHERPTHR45754FAMILY NOT NAMEDcoord: 1..71
IPR003171Methylenetetrahydrofolate reductasePFAMPF02219MTHFRcoord: 1..71
e-value: 1.7E-20
score: 73.5
IPR029041FAD-linked oxidoreductase-likeSUPERFAMILY51730FAD-linked oxidoreductasecoord: 2..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65088contigH-elongata_contig65088:258..1252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65088.14095.1mRNA_H-elongata_contig65088.14095.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65088 231..1252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65088.14095.1 ID=prot_H-elongata_contig65088.14095.1|Name=mRNA_H-elongata_contig65088.14095.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MCINAWGGFKKMTSFCKTRVPSELMSKMEQIKDDEKAVKAFGVEFGAEMC
SAILDGGAPGFHFYTLNLEKVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003171Mehydrof_redctse
IPR029041FAD-linked_oxidoreductase-like