prot_H-elongata_contig6287.13863.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6287.13863.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 8.160e-18 Identity = 57/147 (38.78%), Postives = 72/147 (48.98%), Query Frame = 0
Query: 25 TCSDGTPGLEAEEGQVCCSAGCDACGGPLCSTSGLPDYGSSDCCVITIMNSGVMCETTGEAPCILEVGGPVSITPSPTDVLVASIVSSETSSEILV------------TCSNGITGVESSNGEACCVAACGQCGGLGCSSVGLPDYG 159
TCS+G PG++++ CC A C ACGG C G G+ +CCV I+ G C EAPC ++ P PSP + A TCS GI G+ESS+G CC C CGG GCS+VG+PDYG
Sbjct: 1272 TCSNGIPGIQSDN--ACCLAECGACGGSDCDEFG-GGLGADNCCVSDIVEHGEPCSIALEAPCYIDDSAPA---PSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXTEPTCSTGIPGIESSDGAVCCPTGCTMCGGSGCSTVGMPDYG 1412
BLAST of mRNA_H-elongata_contig6287.13863.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 4.420e-8 Identity = 43/116 (37.07%), Postives = 53/116 (45.69%), Query Frame = 0
Query: 37 EGQVCCSAGCDACGGPLCSTSGLPDYGSSDCCVITIMNSGVMCETTGEAPCILEVGGPVSITPSPTDVLVASIVSSETSSEILVTCSNGITGVESSNGEACCVAACGQCGGLGCSS 152
+G CCSAGC+ CGG CS G +DCC I+ +G C G APC+LE G +P+P S G G+ G+ CC A CG CGG GC S
Sbjct: 26 KGIYCCSAGCEECGGSGCSDRG-DGLTGADCCTSDILAAGKAC---GSAPCLLEEGS----SPTPAS-------------------SGGCDGIL--QGDVCCSAECGTCGGSGCGS 112
BLAST of mRNA_H-elongata_contig6287.13863.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 1.150e-7 Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0
Query: 119 LVTCSNGITGVESSNGEACCVAACGQCGGLGCSSVGLPDYGA 160
+V CS GI G+ESS+G CC C QCGG GCS+VGLP+YGA
Sbjct: 609 VVVCSTGIRGIESSDGAVCCPLGCTQCGGEGCSTVGLPEYGA 650
BLAST of mRNA_H-elongata_contig6287.13863.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 2.950e-7 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
Query: 119 LVTCSNGITGVESSNGEACCVAACGQCGGLGCSSVGLPDYGA 160
++ CS GI G+ESS+G CC C QCGG GCS+VGLP+YGA
Sbjct: 409 VIVCSTGIPGIESSDGTVCCPINCTQCGGEGCSTVGLPEYGA 450
BLAST of mRNA_H-elongata_contig6287.13863.1 vs. uniprot
Match: D7FHN7_ECTSI (von Willebrand A domain containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN7_ECTSI) HSP 1 Score: 52.0 bits (123), Expect = 6.630e-5 Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query: 122 CSNGITGVESSNGEACCVAACGQCGGLGCS 151
CSNG+ G+ESSNG+ACC CG CGG+GCS
Sbjct: 107 CSNGVYGIESSNGKACCALTCGSCGGVGCS 136 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6287.13863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6287.13863.1 ID=prot_H-elongata_contig6287.13863.1|Name=mRNA_H-elongata_contig6287.13863.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bpback to top |