prot_H-elongata_contig62141.13781.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62141.13781.1
Unique Nameprot_H-elongata_contig62141.13781.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
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BLAST of mRNA_H-elongata_contig62141.13781.1 vs. uniprot
Match: UPI001D0055F2 (uncharacterized protein LOC123131583 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0055F2)

HSP 1 Score: 50.8 bits (120), Expect = 2.460e-5
Identity = 29/70 (41.43%), Postives = 38/70 (54.29%), Query Frame = 0 
Query:    4 WWQQYGRMDGFDEIAKVATRCNSNIPASAGLERNWRLFGDVMGGRHARLGAEKAKKLVFVRANLKLVAND 73
            WW Q+G       + K A R  S   +S+G ERNW  F  V   + +RL  +K  KLVFVR NLK+ A +
Sbjct:  178 WWFQFG--GDVPALQKCAMRICSQCVSSSGCERNWSAFALVHTKQRSRLLYDKLHKLVFVRYNLKIRAEE 245
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62141.13781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001D0055F22.460e-541.43uncharacterized protein LOC123131583 n=1 Tax=Triti... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62141contigH-elongata_contig62141:767..1244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62141.13781.1mRNA_H-elongata_contig62141.13781.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62141 767..1244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62141.13781.1 ID=prot_H-elongata_contig62141.13781.1|Name=mRNA_H-elongata_contig62141.13781.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MASWWQQYGRMDGFDEIAKVATRCNSNIPASAGLERNWRLFGDVMGGRHA
RLGAEKAKKLVFVRANLKLVANDYTKWPFIAWDPASVA
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