prot_H-elongata_contig62127.13778.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62127.13778.1
Unique Nameprot_H-elongata_contig62127.13778.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
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BLAST of mRNA_H-elongata_contig62127.13778.1 vs. uniprot
Match: A0A6H5JY04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY04_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 3.110e-35
Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 0 
Query:    2 SRELSNAQGECQRLEQEAQELRRELEACRAQARESAEQANMTNFQNQVLLDMLAVARADEDAFKTKIAREDARYAELSRILEHAYTKIISAGLDPGVSDAP 102
            SREL+ AQGEC+RLE+E   LRR+LE CR  A+  AEQ NM  FQNQ+L+DMLAVARAD+  F+TK+ +E AR+A LSR LE AYTK+++AGLDPGVSDAP
Sbjct:   86 SRELATAQGECKRLEKEVMGLRRDLENCRKDAKRLAEQENMATFQNQLLIDMLAVARADQGIFRTKLEQESARHAVLSRSLEQAYTKLLAAGLDPGVSDAP 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62127.13778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JY04_9PHAE3.110e-3566.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62127contigH-elongata_contig62127:2451..3401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62127.13778.1mRNA_H-elongata_contig62127.13778.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62127 2451..3401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62127.13778.1 ID=prot_H-elongata_contig62127.13778.1|Name=mRNA_H-elongata_contig62127.13778.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
ESRELSNAQGECQRLEQEAQELRRELEACRAQARESAEQANMTNFQNQVL
LDMLAVARADEDAFKTKIAREDARYAELSRILEHAYTKIISAGLDPGVSD
AP*
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