prot_H-elongata_contig61643.13717.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61643.13717.1
Unique Nameprot_H-elongata_contig61643.13717.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
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BLAST of mRNA_H-elongata_contig61643.13717.1 vs. uniprot
Match: A0A6H5KKY5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKY5_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.610e-12
Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 0 
Query:   86 VPIFFPPAVGVASEGLERALHRDPPPGGKVTGRDRIERLEGIDAVVDLLQRVPGYPGTSSAGSVASMDAVAAAARAVLV 164
            V +FFPP VG ASE LE A+ R  P  G +   +R +RL G+ +V++LLQ+V GYPG +++  + + DAVAAAAR VLV
Sbjct:   37 VMVFFPPPVGEASEALEEAMRRAAPADGSLD-EERPDRLVGVTSVIELLQQVAGYPGPTTSLGIINFDAVAAAARGVLV 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61643.13717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKY5_9PHAE2.610e-1250.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61643contigH-elongata_contig61643:2650..3165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61643.13717.1mRNA_H-elongata_contig61643.13717.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61643 2650..3165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61643.13717.1 ID=prot_H-elongata_contig61643.13717.1|Name=mRNA_H-elongata_contig61643.13717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
GLRAEEDSADHADIVTPAVAEGGLVPDPDGSNEGFESLRGCDNRCGSISY
GNKSGGDTPEKDDCGGGSSRGSRGGGNRRRRETAPVPIFFPPAVGVASEG
LERALHRDPPPGGKVTGRDRIERLEGIDAVVDLLQRVPGYPGTSSAGSVA
SMDAVAAAARAVLVPPVARREE
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