prot_H-elongata_contig61022.13649.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig61022.13649.1
Unique Name	prot_H-elongata_contig61022.13649.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	87

Homology

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.890e-31
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 0

Query:    1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            WKR+E SYPLLAR ARVVF APAS  V ERD   AGRMMTSSRS+ DAK V+MVLFLHGN+DL+P  I +LPADGVNG Q+KIPGRL
Sbjct:  653 WKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRL 739

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 4.120e-29
Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 0

Query:    1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDI 68
            WKR  SSYPLLARAARVVFGAPAS+AVLE DF DAGR+MTSSRS+TDAK V+M+LFLHGNLDLIP DI
Sbjct:   41 WKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDI 108

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.920e-27
Identity = 61/87 (70.11%), Postives = 71/87 (81.61%), Query Frame = 0

Query:    1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            WK    +YPLLAR ARVVFGAPAS+AVLERDFS+AGRMMTSSRS+ D+K V+M++FLHGNLDLIP DI KL       A++KIPGRL
Sbjct:  611 WKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAA---ARTKIPGRL 694

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.910e-26
Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 0

Query:    8 YPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKN-VDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            YPLLAR ARVVFGAPAS+AVLERDFS+AGRMMTSSR + D+   V+M+LFLHGNLDLIP DI KL  + V  A+SKIPGRL
Sbjct:    6 YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKL-TEAV--ARSKIPGRL 83

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 5.720e-25
Identity = 61/87 (70.11%), Postives = 69/87 (79.31%), Query Frame = 0

Query:    1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            WK+    YPLLARAARVVFGAPAS+AVLERDF+DA  MM SSRS+ DAK V+MVLFLHGNLDLIP  I +L  + V   Q+KIPGRL
Sbjct:  551 WKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDV---QAKIPGRL 634

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 9.770e-25
Identity = 60/87 (68.97%), Postives = 70/87 (80.46%), Query Frame = 0

Query:    1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            WK    +YPLLAR ARVV GA AS+AVLE DFS+AGRMMTSSRS+ D+K V+M+LFLHGNLDLIP DI KL  + V  A++KIPGRL
Sbjct:  384 WKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL-TEAV--ARTKIPGRL 467

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 9.010e-23
Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 0

Query:    1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            WK    +YPLLAR ARVVFGAPAS+AVLE  FS+AGRM TSSRS+ D+  V+M++FLHGNL+LIP DI KL  + V  A++K PGRL
Sbjct:  147 WKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKL-TEVV--ARTKFPGRL 230

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.800e-21
Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 0

Query:    7 SYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKN-VDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            +Y LL   ARVVFGAPAS+A LERDFS+AGRMMTSSRS+ D+K  V+M+LFLHGNLDLIP DI  L  + V  A++  PGRL
Sbjct:    5 AYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTL-TEAV--ARTMFPGRL 83

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 9.590e-16
Identity = 47/88 (53.41%), Postives = 53/88 (60.23%), Query Frame = 0

Query:    1 WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSK-IPGRL 87
            WKR  SSYPLLARA RVVFGAPAS+A +E                       M+LFLHGNLDLIP DI  LP DG + A +K +PGRL
Sbjct:   41 WKRWMSSYPLLARATRVVFGAPASAAYVE-----------------------MILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRL 105

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BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 9.820e-14
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0

Query:    5 ESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKNVDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL 87
            ++ YP +ARAARV+   PASSAVLERDFS AGR++T +RS   A  V+MVLFL+GN + IP ++ KL        Q  +P RL
Sbjct:  721 QALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQ---GQEAVPRRL 800

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot

BLAST of mRNA_H-elongata_contig61022.13649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFP4_ECTSI	1.890e-31	74.71	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5L5L6_9PHAE	4.120e-29	83.82	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZ82_9PHAE	2.920e-27	70.11	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KCJ3_9PHAE	1.910e-26	74.07	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
D8LBK4_ECTSI	5.720e-25	70.11	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JNY1_9PHAE	9.770e-25	68.97	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JML0_9PHAE	9.010e-23	64.37	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KW12_9PHAE	2.800e-21	65.85	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KGU9_9PHAE	9.590e-16	53.41	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KVU5_9PHAE	9.820e-14	51.81	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 1..61 e-value: 7.9E-14 score: 51.2
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig61022	contig	H-elongata_contig61022:1696..1956 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig61022.13649.1	mRNA_H-elongata_contig61022.13649.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig61022 1696..1956 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig61022.13649.1 ID=prot_H-elongata_contig61022.13649.1|Name=mRNA_H-elongata_contig61022.13649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
WKRRESSYPLLARAARVVFGAPASSAVLERDFSDAGRMMTSSRSSTDAKN
VDMVLFLHGNLDLIPGDIAKLPADGVNGAQSKIPGRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf