prot_H-elongata_contig60846.13626.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60846.13626.1
Unique Nameprot_H-elongata_contig60846.13626.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length393
Homology
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 2.870e-88
Identity = 141/191 (73.82%), Postives = 159/191 (83.25%), Query Frame = 0
Query:    1 QGGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQT--AEATQSSPMSEEACHELVHAFAPKNEAGGGG 189
            QGGG QAS+GGDAF VLL+RFG RMECFASPFNCRY+RYCSAF DTD PFGS GSFFDF+P +GA+EANPPFVR+VILKMANH+D LL+A++ ALTFVVIIP WED+ GW RL +S FL+KHIK+DQKDHGYCEGKQHLRRNRYRLASFHTS+FFLQT  A   QS     +AC EL  AFA + E  G G
Sbjct:  281 QGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQEGDGSG 471          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: D0NY28_PHYIT (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NY28_PHYIT)

HSP 1 Score: 214 bits (546), Expect = 5.270e-63
Identity = 99/181 (54.70%), Postives = 129/181 (71.27%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW++  GW +L  S F  +H+ I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++E+    L  AF  K
Sbjct:  142 GGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLEGLKQAFRSK 322          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A3M6VL48_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL48_9STRA)

HSP 1 Score: 215 bits (547), Expect = 7.350e-62
Identity = 99/181 (54.70%), Postives = 127/181 (70.17%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F++IIP W+   GW +L  S F  +H+ I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q A A    P++E+    L HAF  K
Sbjct:  254 GGGFQAALNEECFDVLLKEFNCKMECFASPLNCRYSRFCSAFLDTDFVFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLTAADGPLAFIIIIPTWQKTEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAMACNEWPVTEKKLESLKHAFRSK 434          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A485L2N9_9STRA (Aste57867_14883 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2N9_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.060e-61
Identity = 103/181 (56.91%), Postives = 126/181 (69.61%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F VLL  F  +MECFASPFNCRY R+CSAF+DTD  FGS GSFFDFRP  G FEANPPFV ++I KMA H+ D L  ++  L F++IIPAWE   GW +L  S+F   ++ I QK HGYCEGKQ +R  RYR+ASF TS+FF Q A A +  P++E A  EL  AF  K
Sbjct:  242 GGGFQAALNEECFDVLLTHFDAKMECFASPFNCRYGRFCSAFLDTDMVFGSYGSFFDFRPASGCFEANPPFVPSLIAKMAEHMTDCLTKAAKPLAFIIIIPAWEHTEGWQQLRNSSFNKHYLLISQKHHGYCEGKQQMRPTRYRIASFDTSVFFWQNAMAAKKWPVTEAALEELRVAFKSK 422          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A329T4D0_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4D0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.630e-61
Identity = 98/181 (54.14%), Postives = 129/181 (71.27%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW++  GW +L  S F  +H+ + QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++E+    L  AF  K
Sbjct:  274 GGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSLFFWQNSKACNKWPVTEKKLESLKQAFKSK 454          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A6A3R028_9STRA (PCIF1_WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R028_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.700e-61
Identity = 99/181 (54.70%), Postives = 128/181 (70.72%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW+D  GW +L  S +   H+ + QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++EE    L  AF  K
Sbjct:  265 GGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEEKLESLKSAFKSK 445          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A3R7HJ33_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HJ33_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.850e-61
Identity = 99/181 (54.70%), Postives = 130/181 (71.82%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F VLL+ F  +MECFASP N RY+R+CSAF+DTD+ FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW++  GW +L  S +   H++I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q A+A    P++E+A   L  AF  K
Sbjct:  251 GGGFQAALNEECFDVLLKYFDAKMECFASPLNSRYSRFCSAFLDTDAAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRYNQIHLRIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKACSKWPVTEKALESLKQAFKSK 431          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A0P1A8A2_PLAHL (Phosphorylated CTD interacting factor 1, WW domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8A2_PLAHL)

HSP 1 Score: 214 bits (545), Expect = 1.930e-61
Identity = 99/181 (54.70%), Postives = 131/181 (72.38%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F VLL  F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+ +LL A++G LTF+VIIP+W+   GW +L  S +  +H+ I QK HG+CEGKQ LR+ R+R+ASF TSIFFLQ ++A    P++++    L  AF  K
Sbjct:  261 GGGFQAALNEECFDVLLEEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMAELLTAANGPLTFIVIIPSWQKTEGWQQLNASRYNQRHVLIPQKQHGFCEGKQQLRKTRWRIASFDTSIFFLQNSKACNQWPVTDQKLKLLKQAFKSK 441          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: G4YF15_PHYSP (PCIF1_WW domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4YF15_PHYSP)

HSP 1 Score: 211 bits (536), Expect = 4.240e-61
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GG  QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW+D  GW +L  S +   H+ I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++E+    L  AF  K
Sbjct:  177 GGFQQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDCAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNSSRYNQTHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLDSLKSAFKSK 357          
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A8K1FGW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGW1_PYTOL)

HSP 1 Score: 211 bits (536), Expect = 3.000e-60
Identity = 98/181 (54.14%), Postives = 131/181 (72.38%), Query Frame = 0
Query:    2 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 182
            GGG QA++  + F  LLR F  +MECFASP N RY+R+CSAF+DTD+ FGS+GSFFDF P  G FEANPPF+  +I +MA+H+  LL A+ GAL F++IIPAW++  GW  L  S +  + + + QKDHGYCEGKQ +R+ R+R+ASF TS+FF Q A+ATQ  P+++ A  +L  AF  K
Sbjct:  256 GGGFQAALNEECFDTLLRHFDCKMECFASPLNSRYSRFCSAFLDTDAAFGSVGSFFDFTPRTGCFEANPPFIPQLIKRMADHMSALLDAADGALMFIIIIPAWKETEGWKLLHASRYNQQDMIVAQKDHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKATQKWPVTKAAMDDLREAFRSK 436          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYX1_ECTSI2.870e-8873.82PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
D0NY28_PHYIT5.270e-6354.70PCIF1_WW domain-containing protein n=1 Tax=Phytoph... [more]
A0A3M6VL48_9STRA7.350e-6254.70PCIF1_WW domain-containing protein n=1 Tax=Peronos... [more]
A0A485L2N9_9STRA1.060e-6156.91Aste57867_14883 protein n=1 Tax=Aphanomyces stella... [more]
A0A329T4D0_9STRA1.630e-6154.14PCIF1_WW domain-containing protein n=1 Tax=Phytoph... [more]
A0A6A3R028_9STRA1.700e-6154.70PCIF1_WW domain-containing protein n=4 Tax=Phytoph... [more]
A0A3R7HJ33_9STRA1.850e-6154.70PCIF1_WW domain-containing protein n=3 Tax=Phytoph... [more]
A0A0P1A8A2_PLAHL1.930e-6154.70Phosphorylated CTD interacting factor 1, WW domain... [more]
G4YF15_PHYSP4.240e-6154.14PCIF1_WW domain-containing protein n=11 Tax=Phytop... [more]
A0A8K1FGW1_PYTOL3.000e-6054.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022035PCIF1, WW domainPFAMPF12237PCIF1_WWcoord: 3..135
e-value: 1.0E-50
score: 171.7
IPR039881mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-likePANTHERPTHR21727PHOSPHORYLATED CTD INTERACTING FACTOR 1coord: 4..185
NoneNo IPR availablePANTHERPTHR21727:SF0PHOSPHORYLATED CTD-INTERACTING FACTOR 1coord: 4..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60846contigH-elongata_contig60846:484..3601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60846.13626.1mRNA_H-elongata_contig60846.13626.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60846 484..3601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60846.13626.1 ID=prot_H-elongata_contig60846.13626.1|Name=mRNA_H-elongata_contig60846.13626.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=393bp
QGGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPF
GSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVI
IPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFH
TSIFFLQTAEATQSSPMSEEACHELVHAFAPKNEAGGGGESDKNSGVESS
TKPTPTAFAAEAATAGALTTRELRADGNKNACGDGVEYKADGIRVSSFAT
PPALAGKGDTGKVVREPTDKQHGKERESGGRKGKRRRDRFGEGRGADWRT
HGARRSFDKDKILSRSSNAAIGNMALVEKGGESRCLDHRPRQKAENWGSG
GGYEAEGIPSGKIKIQHKGRSSRRMMGAAAGRVDKPASHTSRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022035PCIF1_WW
IPR039881PCIF1-like