mRNA_H-elongata_contig60846.13626.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig60846.13626.1
Unique NamemRNA_H-elongata_contig60846.13626.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 2.870e-88
Identity = 141/191 (73.82%), Postives = 159/191 (83.25%), Query Frame = 1 
Query:    1 QGGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQT--AEATQSSPMSEEACHELVHAFAPKNEAGGGG 567
            QGGG QAS+GGDAF VLL+RFG RMECFASPFNCRY+RYCSAF DTD PFGS GSFFDF+P +GA+EANPPFVR+VILKMANH+D LL+A++ ALTFVVIIP WED+ GW RL +S FL+KHIK+DQKDHGYCEGKQHLRRNRYRLASFHTS+FFLQT  A   QS     +AC EL  AFA + E  G G
Sbjct:  281 QGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQEGDGSG 471
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: D0NY28_PHYIT (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NY28_PHYIT)

HSP 1 Score: 214 bits (546), Expect = 5.270e-63
Identity = 99/181 (54.70%), Postives = 129/181 (71.27%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW++  GW +L  S F  +H+ I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++E+    L  AF  K
Sbjct:  142 GGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLEGLKQAFRSK 322
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A3M6VL48_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL48_9STRA)

HSP 1 Score: 215 bits (547), Expect = 7.350e-62
Identity = 99/181 (54.70%), Postives = 127/181 (70.17%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F++IIP W+   GW +L  S F  +H+ I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q A A    P++E+    L HAF  K
Sbjct:  254 GGGFQAALNEECFDVLLKEFNCKMECFASPLNCRYSRFCSAFLDTDFVFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLTAADGPLAFIIIIPTWQKTEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAMACNEWPVTEKKLESLKHAFRSK 434
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A485L2N9_9STRA (Aste57867_14883 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2N9_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.060e-61
Identity = 103/181 (56.91%), Postives = 126/181 (69.61%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F VLL  F  +MECFASPFNCRY R+CSAF+DTD  FGS GSFFDFRP  G FEANPPFV ++I KMA H+ D L  ++  L F++IIPAWE   GW +L  S+F   ++ I QK HGYCEGKQ +R  RYR+ASF TS+FF Q A A +  P++E A  EL  AF  K
Sbjct:  242 GGGFQAALNEECFDVLLTHFDAKMECFASPFNCRYGRFCSAFLDTDMVFGSYGSFFDFRPASGCFEANPPFVPSLIAKMAEHMTDCLTKAAKPLAFIIIIPAWEHTEGWQQLRNSSFNKHYLLISQKHHGYCEGKQQMRPTRYRIASFDTSVFFWQNAMAAKKWPVTEAALEELRVAFKSK 422
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BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A329T4D0_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4D0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.630e-61
Identity = 98/181 (54.14%), Postives = 129/181 (71.27%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW++  GW +L  S F  +H+ + QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++E+    L  AF  K
Sbjct:  274 GGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSLFFWQNSKACNKWPVTEKKLESLKQAFKSK 454
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A6A3R028_9STRA (PCIF1_WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R028_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.700e-61
Identity = 99/181 (54.70%), Postives = 128/181 (70.72%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW+D  GW +L  S +   H+ + QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++EE    L  AF  K
Sbjct:  265 GGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEEKLESLKSAFKSK 445
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A3R7HJ33_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HJ33_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.850e-61
Identity = 99/181 (54.70%), Postives = 130/181 (71.82%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F VLL+ F  +MECFASP N RY+R+CSAF+DTD+ FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW++  GW +L  S +   H++I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q A+A    P++E+A   L  AF  K
Sbjct:  251 GGGFQAALNEECFDVLLKYFDAKMECFASPLNSRYSRFCSAFLDTDAAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRYNQIHLRIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKACSKWPVTEKALESLKQAFKSK 431
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A0P1A8A2_PLAHL (Phosphorylated CTD interacting factor 1, WW domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8A2_PLAHL)

HSP 1 Score: 214 bits (545), Expect = 1.930e-61
Identity = 99/181 (54.70%), Postives = 131/181 (72.38%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F VLL  F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+ +LL A++G LTF+VIIP+W+   GW +L  S +  +H+ I QK HG+CEGKQ LR+ R+R+ASF TSIFFLQ ++A    P++++    L  AF  K
Sbjct:  261 GGGFQAALNEECFDVLLEEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMAELLTAANGPLTFIVIIPSWQKTEGWQQLNASRYNQRHVLIPQKQHGFCEGKQQLRKTRWRIASFDTSIFFLQNSKACNQWPVTDQKLKLLKQAFKSK 441
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: G4YF15_PHYSP (PCIF1_WW domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4YF15_PHYSP)

HSP 1 Score: 211 bits (536), Expect = 4.240e-61
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GG  QA++  + F VLL+ F  +MECFASP NCRY+R+CSAF+DTD  FGS+GSFFDF P  G FEANPPF+  VI +MA+H+  LL A+ G L F+VIIPAW+D  GW +L  S +   H+ I QK HGYCEGKQ +R+ R+R+ASF TS+FF Q ++A    P++E+    L  AF  K
Sbjct:  177 GGFQQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDCAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNSSRYNQTHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLDSLKSAFKSK 357
[Close]
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Match: A0A8K1FGW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGW1_PYTOL)

HSP 1 Score: 211 bits (536), Expect = 3.000e-60
Identity = 98/181 (54.14%), Postives = 131/181 (72.38%), Query Frame = 1 
Query:    4 GGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPFGSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVIIPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFHTSIFFLQTAEATQSSPMSEEACHELVHAFAPK 546
            GGG QA++  + F  LLR F  +MECFASP N RY+R+CSAF+DTD+ FGS+GSFFDF P  G FEANPPF+  +I +MA+H+  LL A+ GAL F++IIPAW++  GW  L  S +  + + + QKDHGYCEGKQ +R+ R+R+ASF TS+FF Q A+ATQ  P+++ A  +L  AF  K
Sbjct:  256 GGGFQAALNEECFDTLLRHFDCKMECFASPLNSRYSRFCSAFLDTDAAFGSVGSFFDFTPRTGCFEANPPFIPQLIKRMADHMSALLDAADGALMFIIIIPAWKETEGWKLLHASRYNQQDMIVAQKDHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKATQKWPVTKAAMDDLREAFRSK 436
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60846.13626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYX1_ECTSI2.870e-8873.82PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
D0NY28_PHYIT5.270e-6354.70PCIF1_WW domain-containing protein n=1 Tax=Phytoph... [more]
A0A3M6VL48_9STRA7.350e-6254.70PCIF1_WW domain-containing protein n=1 Tax=Peronos... [more]
A0A485L2N9_9STRA1.060e-6156.91Aste57867_14883 protein n=1 Tax=Aphanomyces stella... [more]
A0A329T4D0_9STRA1.630e-6154.14PCIF1_WW domain-containing protein n=1 Tax=Phytoph... [more]
A0A6A3R028_9STRA1.700e-6154.70PCIF1_WW domain-containing protein n=4 Tax=Phytoph... [more]
A0A3R7HJ33_9STRA1.850e-6154.70PCIF1_WW domain-containing protein n=3 Tax=Phytoph... [more]
A0A0P1A8A2_PLAHL1.930e-6154.70Phosphorylated CTD interacting factor 1, WW domain... [more]
G4YF15_PHYSP4.240e-6154.14PCIF1_WW domain-containing protein n=11 Tax=Phytop... [more]
A0A8K1FGW1_PYTOL3.000e-6054.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60846contigH-elongata_contig60846:484..3601 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue2.3e-77
Seed eggNOG ortholog2880.D7FYX1
Preferred namePCIF1
KEGG koko:K17584
GOsGO:0003002,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005856,GO:0007275,GO:0007389,GO:0007444,GO:0007447,GO:0007450,GO:0008150,GO:0009888,GO:0009892,GO:0009953,GO:0010563,GO:0010921,GO:0010923,GO:0015630,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0035220,GO:0035222,GO:0035295,GO:0035303,GO:0035305,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044092,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045171,GO:0045936,GO:0048190,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051174,GO:0051336,GO:0051346,GO:0060429,GO:0065007,GO:0065009,GO:0070013
EggNOG free text desc.negative regulation of phosphatase activity
EggNOG OGs28P6D@1,2QVT7@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphorylated CTD interacting factor 1, WW domain
Ec32 orthologEc-19_002790.1
Exons4
Model size1179
Cds size1179
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60846.13626.1prot_H-elongata_contig60846.13626.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig60846 484..3601 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930983.156826-CDS-H-elongata_contig60846:483..6381622930983.156826-CDS-H-elongata_contig60846:483..638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 484..638 +
1691679650.2923822-CDS-H-elongata_contig60846:483..6381691679650.2923822-CDS-H-elongata_contig60846:483..638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 484..638 +
1622930983.1789627-CDS-H-elongata_contig60846:1009..11211622930983.1789627-CDS-H-elongata_contig60846:1009..1121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 1010..1121 +
1691679650.3121529-CDS-H-elongata_contig60846:1009..11211691679650.3121529-CDS-H-elongata_contig60846:1009..1121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 1010..1121 +
1622930983.1988528-CDS-H-elongata_contig60846:1962..20801622930983.1988528-CDS-H-elongata_contig60846:1962..2080Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 1963..2080 +
1691679650.3222246-CDS-H-elongata_contig60846:1962..20801691679650.3222246-CDS-H-elongata_contig60846:1962..2080Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 1963..2080 +
1622930983.2149186-CDS-H-elongata_contig60846:2807..36011622930983.2149186-CDS-H-elongata_contig60846:2807..3601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 2808..3601 +
1691679650.3323896-CDS-H-elongata_contig60846:2807..36011691679650.3323896-CDS-H-elongata_contig60846:2807..3601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig60846 2808..3601 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig60846.13626.1

>prot_H-elongata_contig60846.13626.1 ID=prot_H-elongata_contig60846.13626.1|Name=mRNA_H-elongata_contig60846.13626.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=393bp
QGGGVQASVGGDAFGVLLRRFGVRMECFASPFNCRYARYCSAFVDTDSPF
GSLGSFFDFRPNEGAFEANPPFVRNVILKMANHIDDLLRASSGALTFVVI
IPAWEDATGWVRLCESTFLTKHIKIDQKDHGYCEGKQHLRRNRYRLASFH
TSIFFLQTAEATQSSPMSEEACHELVHAFAPKNEAGGGGESDKNSGVESS
TKPTPTAFAAEAATAGALTTRELRADGNKNACGDGVEYKADGIRVSSFAT
PPALAGKGDTGKVVREPTDKQHGKERESGGRKGKRRRDRFGEGRGADWRT
HGARRSFDKDKILSRSSNAAIGNMALVEKGGESRCLDHRPRQKAENWGSG
GGYEAEGIPSGKIKIQHKGRSSRRMMGAAAGRVDKPASHTSRK
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mRNA from alignment at H-elongata_contig60846:484..3601+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig60846.13626.1 ID=mRNA_H-elongata_contig60846.13626.1|Name=mRNA_H-elongata_contig60846.13626.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3118bp|location=Sequence derived from alignment at H-elongata_contig60846:484..3601+ (Himanthalia elongata Himel1 dioecious)
CAGGGGGGGGGGGTCCAGGCGTCGGTGGGGGGGGACGCGTTCGGTGTGCT
CCTTCGGCGCTTCGGGGTGAGGATGGAGTGCTTCGCATCGCCGTTCAACT
GCCGGTACGCTCGCTATTGCAGCGCTTTCGTGGACACCGACTCGCCCTTC
GGCAGGTGGGCGTAGGTTCACTTAAAACGAAAACTCTTGCTGTGAGACGT
GGCGCTCTTCAGGCGGGTGGGTCGGTGTCTTGACAGGGATGGGGCCAGCG
GAGACGTAAACACACGGGATCAAACGCGTTCTGTACATCCCAGCGGTCAT
CGTTGTTTCGTTTCTGCTTCGATCGAGGCTCTTCAAATCCAGGTACCTGG
TATGTATTGAGTCCTAGGGTACATCCCGCCGAGCCCCTCCTCACGCGAGA
GGCTACATGCAATGCGGTCGTAGCGCTCTCTAGGGAGCAGATATCTTAAA
CGCAATCGCGAGTGCTTTGTTCTTCTCTTCTCTTTTTTGTTGTTGTATCT
CATGTCTACGTTGTGACACATGAAAGCTTGGGGAGCTTCTTTGACTTCCG
ACCCAACGAGGGAGCCTTCGAGGCCAACCCCCCGTTCGTGCGCAACGTAA
TCCTCAAGATGGCCAATCACATTGACGATCTCCTCCGGGTGAGATTTGGT
TCAACCCTGCTCGACTCGAAAGAAGAGCGATGAATTCCTGAAAAAAAAGC
GGAATCTCCCCCCGTGCGTCCACCCAACGTGCAGCAAAACATTATTTTTT
GCGATAATGAACAAAGAGAGGCGTTACGGGGGTGTGTTCCAGCGCGAAAT
GAAAGTCGGCATTTGAGTACACAAGCACGCTTATTGTATTTTTTAGCTAC
TGCTGCAAATGTGGGGTGTCGGGTCGCCCGTGGAGTGTGCGTGCCTCCGA
CGAGCGCCGTGCAAGACCTTTACGTGCGCAATGAGTGTCCCGAACTTTTT
TACGTCACCGCCCTCCCCACCCCTCCCTCATATTCCTTGATCACTATGTC
CTTGGAGAATAAAATATGTACCCATGCTGATCACAGCTGACAGGTATAGC
TTGGGGCGCCCGTTAATACACCTGTACAGTTGTACTCGAAACACACACCT
GTAAAAAAAACGCCTACTGAATCAGCATTAATTTCACCCTCCCCCCAAAA
AACGTTGATTTCATGCAGAGTAAAATAGCCGTTTCTCTGAAACCATATAT
ATACTGGCTGACCCAACCCGCCCCTAACCCTAAACCACACACCCTCACCC
ATGGGGCTGGGTTTTTGTGGATATATGATGGTTCAGTAGGCGTTTTTTTT
ACAGGTGCGTGTTTCGAGTACACCTGTACAGGTGTATTCTCGGGCACCTA
GTCAAACTAGTTTTATCTTTTGCCTTAGGTATCCCCCTCGTTCCTCCATT
CTCACCGTGGAGTGCTTGTCGCGCGGGGTCGGTCTCAACTCTATCGTTTT
CCCCCGTTTTGTTATCCTCACCCACGAAGGCATCGTCCGGAGCGCTCACG
TTCGTGGTGATTATCCCTGCCTGGGAAGACGCGACGGGATGGGTTCGGCT
CTGCGAGAGTACGTTCTTAACAAAGCACATCAAGATCGATCAGAAAGGCG
AGAGACCAAGCGTTTTCGAATGAAGGCATGGCTTCCGATACTGTCTATCG
TACATGTCCACTCTGGTACCATTAGTGAGTATGGGAAAAGAGAGGCCCAA
ATTAATTGGTCGATGGGGTAAACCTGGACAGGCCGCACCCATTCCTTAGG
CTACCTTGAGGACTGCTGGCTTAGTACCGGCGGGCTCTCGGTGATGAACG
CCATCGGTACGCAATTCCGTGACCTGATAAACTTGGGATTAGCCCGATAG
CGATTGACGGTAGAGATGGCGGAAAACGACAGGATCCCGGGAGTATGTAC
CTGAATGAGCGGGCTGACGCAGGACGGGACGGCCGAATCCGTCTCGCGAG
ACCAAAATTTCAGGCGCGAACGGGACAGGGAACACATGTTTCCTGTTTCA
GCTGGCTTTACTATATGAGATGCCCACACAGTGCGCGAATTGTTTTTGCG
ATCCGCGTTCGGCTCAGCTCACGGGTAATGTTATTGGACTTGGTAAGAAG
GCGGCTGGTTCAGGAAGTGGGCGTAGGTTGGATTACGCGCGCGAGGGGTG
GGTTTTAGTTTTGAGAGCTCGGGAGGGGAGCCCCCCTTGTTTTACTGACG
CCTTCGAAGTAACAGCGGCAGAATCTTCGTCTCTTCGAAGGTAGACGCGG
CAAACGAATGAACTCTATTTTTCTCCCCTCCAAGCCTTCCTTTCCCCCGC
CAACCGCATGGTTCCTCCACTCAGACCACGGCTACTGCGAGGGAAAGCAG
CACCTGCGGCGCAACCGATACCGCCTCGCGTCCTTCCACACCAGCATTTT
TTTTCTGCAGACCGCGGAGGCGACACAGTCGAGCCCCATGAGCGAAGAAG
CTTGCCACGAGCTCGTTCACGCTTTCGCACCGAAGAACGAGGCGGGTGGA
GGCGGCGAAAGCGACAAAAACAGCGGAGTCGAGTCGTCTACGAAACCCAC
CCCCACCGCGTTTGCAGCAGAGGCGGCAACAGCGGGCGCGCTCACAACGC
GGGAGCTGCGAGCCGACGGCAATAAGAACGCGTGCGGCGACGGAGTCGAA
TATAAAGCGGACGGGATACGGGTATCATCTTTCGCGACACCGCCGGCGTT
GGCTGGGAAGGGGGACACTGGTAAAGTTGTGCGCGAGCCGACTGACAAGC
AACACGGAAAGGAGAGAGAAAGCGGCGGGAGAAAGGGAAAGCGAAGGCGT
GATAGGTTTGGTGAAGGAAGAGGCGCGGATTGGCGCACCCACGGCGCGAG
GCGGAGCTTCGACAAGGACAAAATCCTTTCTAGAAGCTCGAATGCGGCAA
TAGGAAACATGGCTCTGGTTGAAAAGGGAGGGGAGTCTCGGTGCCTAGAT
CACCGTCCGAGGCAAAAGGCGGAGAACTGGGGTAGCGGAGGTGGTTATGA
AGCCGAGGGAATCCCGAGCGGGAAAATAAAAATACAACACAAAGGGCGGA
GTTCGCGACGCATGATGGGGGCGGCGGCGGGGAGAGTAGACAAGCCAGCG
TCTCATACTTCGCGTAAA
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Coding sequence (CDS) from alignment at H-elongata_contig60846:484..3601+

>mRNA_H-elongata_contig60846.13626.1 ID=mRNA_H-elongata_contig60846.13626.1|Name=mRNA_H-elongata_contig60846.13626.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2358bp|location=Sequence derived from alignment at H-elongata_contig60846:484..3601+ (Himanthalia elongata Himel1 dioecious)
CAGGGGGGGGGGGTCCAGGCGTCGGTGGGGGGGGACGCGTTCGGTGTGCT
CCTTCGGCGCTTCGGGGTGAGGATGGAGTGCTTCGCATCGCCGTTCAACT
GCCGGTACGCTCGCTATTGCAGCGCTTTCGTGGACACCGACTCGCCCTTC
GGCAGCAGGGGGGGGGGGTCCAGGCGTCGGTGGGGGGGGACGCGTTCGGT
GTGCTCCTTCGGCGCTTCGGGGTGAGGATGGAGTGCTTCGCATCGCCGTT
CAACTGCCGGTACGCTCGCTATTGCAGCGCTTTCGTGGACACCGACTCGC
CCTTCGGCAGCTTGGGGAGCTTCTTTGACTTCCGACCCAACGAGGGAGCC
TTCGAGGCCAACCCCCCGTTCGTGCGCAACGTAATCCTCAAGATGGCCAA
TCACATTGACGATCTCCTCCGGCTTGGGGAGCTTCTTTGACTTCCGACCC
AACGAGGGAGCCTTCGAGGCCAACCCCCCGTTCGTGCGCAACGTAATCCT
CAAGATGGCCAATCACATTGACGATCTCCTCCGGGCATCGTCCGGAGCGC
TCACGTTCGTGGTGATTATCCCTGCCTGGGAAGACGCGACGGGATGGGTT
CGGCTCTGCGAGAGTACGTTCTTAACAAAGCACATCAAGATCGATCAGAA
AGGCATCGTCCGGAGCGCTCACGTTCGTGGTGATTATCCCTGCCTGGGAA
GACGCGACGGGATGGGTTCGGCTCTGCGAGAGTACGTTCTTAACAAAGCA
CATCAAGATCGATCAGAAAGACCACGGCTACTGCGAGGGAAAGCAGCACC
TGCGGCGCAACCGATACCGCCTCGCGTCCTTCCACACCAGCATTTTTTTT
CTGCAGACCGCGGAGGCGACACAGTCGAGCCCCATGAGCGAAGAAGCTTG
CCACGAGCTCGTTCACGCTTTCGCACCGAAGAACGAGGCGGGTGGAGGCG
GCGAAAGCGACAAAAACAGCGGAGTCGAGTCGTCTACGAAACCCACCCCC
ACCGCGTTTGCAGCAGAGGCGGCAACAGCGGGCGCGCTCACAACGCGGGA
GCTGCGAGCCGACGGCAATAAGAACGCGTGCGGCGACGGAGTCGAATATA
AAGCGGACGGGATACGGGTATCATCTTTCGCGACACCGCCGGCGTTGGCT
GGGAAGGGGGACACTGGTAAAGTTGTGCGCGAGCCGACTGACAAGCAACA
CGGAAAGGAGAGAGAAAGCGGCGGGAGAAAGGGAAAGCGAAGGCGTGATA
GGTTTGGTGAAGGAAGAGGCGCGGATTGGCGCACCCACGGCGCGAGGCGG
AGCTTCGACAAGGACAAAATCCTTTCTAGAAGCTCGAATGCGGCAATAGG
AAACATGGCTCTGGTTGAAAAGGGAGGGGAGTCTCGGTGCCTAGATCACC
GTCCGAGGCAAAAGGCGGAGAACTGGGGTAGCGGAGGTGGTTATGAAGCC
GAGGGAATCCCGAGCGGGAAAATAAAAATACAACACAAAGGGCGGAGTTC
GCGACGCATGATGGGGGCGGCGGCGGGGAGAGTAGACAAGCCAGCGTCTC
ATACTTCGCGTAAAACCACGGCTACTGCGAGGGAAAGCAGCACCTGCGGC
GCAACCGATACCGCCTCGCGTCCTTCCACACCAGCATTTTTTTTCTGCAG
ACCGCGGAGGCGACACAGTCGAGCCCCATGAGCGAAGAAGCTTGCCACGA
GCTCGTTCACGCTTTCGCACCGAAGAACGAGGCGGGTGGAGGCGGCGAAA
GCGACAAAAACAGCGGAGTCGAGTCGTCTACGAAACCCACCCCCACCGCG
TTTGCAGCAGAGGCGGCAACAGCGGGCGCGCTCACAACGCGGGAGCTGCG
AGCCGACGGCAATAAGAACGCGTGCGGCGACGGAGTCGAATATAAAGCGG
ACGGGATACGGGTATCATCTTTCGCGACACCGCCGGCGTTGGCTGGGAAG
GGGGACACTGGTAAAGTTGTGCGCGAGCCGACTGACAAGCAACACGGAAA
GGAGAGAGAAAGCGGCGGGAGAAAGGGAAAGCGAAGGCGTGATAGGTTTG
GTGAAGGAAGAGGCGCGGATTGGCGCACCCACGGCGCGAGGCGGAGCTTC
GACAAGGACAAAATCCTTTCTAGAAGCTCGAATGCGGCAATAGGAAACAT
GGCTCTGGTTGAAAAGGGAGGGGAGTCTCGGTGCCTAGATCACCGTCCGA
GGCAAAAGGCGGAGAACTGGGGTAGCGGAGGTGGTTATGAAGCCGAGGGA
ATCCCGAGCGGGAAAATAAAAATACAACACAAAGGGCGGAGTTCGCGACG
CATGATGGGGGCGGCGGCGGGGAGAGTAGACAAGCCAGCGTCTCATACTT
CGCGTAAA
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