prot_H-elongata_contig60507.13595.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60507.13595.1
Unique Nameprot_H-elongata_contig60507.13595.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: D8LFY0_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY0_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 1.980e-86
Identity = 124/141 (87.94%), Postives = 132/141 (93.62%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLGKV 148
            +TVFWHSSAHCLG A+E+K GCHLTHGPPVDNGFFYDCYMG  +VGEKDLKDLDKEV+RCCK KQTFDRL+LTKEEALDMF YNAFKKEYI T+IPDGG TTVYRNGDFVDLCRGPHVPYST+IQAFNS RTSSTNWLGKV
Sbjct:  224 QTVFWHSSAHCLGFALEKKLGCHLTHGPPVDNGFFYDCYMGGSAVGEKDLKDLDKEVTRCCKAKQTFDRLVLTKEEALDMFDYNAFKKEYINTRIPDGGSTTVYRNGDFVDLCRGPHVPYSTMIQAFNSIRTSSTNWLGKV 364          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: A0A835YMV8_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 9.370e-72
Identity = 104/140 (74.29%), Postives = 122/140 (87.14%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLGK 147
            + VFWHSSAHCLG AME +YGCHLTHGPP++ GFFYDCYMG   V +KDL DLDK V+  CK+KQTFDRL+L+KEEAL+MF YN FK +YI T+IP+GGCTTVY+NG+F+DLCRGPHVPYST+IQAF +TR SSTNWLGK
Sbjct:  195 QAVFWHSSAHCLGHAMECRYGCHLTHGPPIEQGFFYDCYMGDNVVSDKDLPDLDKHVTAQCKQKQTFDRLVLSKEEALEMFKYNPFKAQYIQTRIPEGGCTTVYKNGEFIDLCRGPHVPYSTMIQAFAATRNSSTNWLGK 334          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: H6WB86_VAULI (Threonine--tRNA ligase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB86_VAULI)

HSP 1 Score: 223 bits (569), Expect = 4.050e-66
Identity = 98/140 (70.00%), Postives = 116/140 (82.86%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLGK 147
            K VFWHSSAH +G AME KYGCHLTHGPP++ GFFYDCYMG   V +KD  +L++ V + CKK Q F+RL+LTK+EALDMF YN FK +YI TKIPDG CTTVY+NGDF+DLCRGPHVP ST+IQAF +T+TS+TNWL K
Sbjct:  197 KAVFWHSSAHYMGFAMECKYGCHLTHGPPIEQGFFYDCYMGDNVVSDKDFLNLNQTVMQECKKNQNFERLMLTKDEALDMFKYNPFKVQYIQTKIPDGSCTTVYKNGDFIDLCRGPHVPQSTMIQAFAATKTSATNWLAK 336          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: A0A7S2XW11_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW11_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.370e-55
Identity = 84/139 (60.43%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLG 146
            KTVFWHSS+H LG A+E KYGCHLT GPP+ NGF+YDCYMG   + +K+  D++K V +  KKK  F RL+L+KE+AL+MF +N FK   I+ KIPD G TTVYRNGD +DLCRGPH+P++  I+ F   R SSTNWLG
Sbjct:  210 KTVFWHSSSHVLGCALEEKYGCHLTIGPPLQNGFYYDCYMGEHVISDKEFSDIEKVVQQQVKKKHKFQRLVLSKEDALEMFKFNPFKVSLISNKIPDNGFTTVYRNGDLIDLCRGPHIPHTGKIKGFACARNSSTNWLG 348          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: W7TCM5_9STRA (Threonine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCM5_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.810e-53
Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLGK 147
            K VFWHSSAH LG A+E+K+G HLT GPPV +GF+YDCYMG   V   D KDL+  V +  K+KQ F+RL++TK EAL +F YNAFK   I++KIP+GG TTVYRNGD +DLCRGPHVP++  ++AF + + S  NWLG+
Sbjct:  198 KAVFWHSSAHMLGQALEKKFGAHLTIGPPVQDGFYYDCYMGEHGVSNTDFKDLEALVGKAAKEKQRFERLVVTKAEALALFKYNAFKTSIISSKIPEGGYTTVYRNGDLIDLCRGPHVPHTGRVRAFAAVKNSGANWLGQ 337          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: A0A7S2YSD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSD7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 5.650e-53
Identity = 78/138 (56.52%), Postives = 106/138 (76.81%), Query Frame = 0
Query:    9 TVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLG 146
            TVFWHSSAH +G A+E  YGC LT GPP+  GF+YD YMG+ S+ + D K +++EV++  K+KQ F+R+++TKEE L++F+ N FK   + TK+PDGG TTVYR GD +DLCRGPHVP +  ++AF +TR S+TNWLG
Sbjct:  114 TVFWHSSAHMMGEALEHLYGCKLTIGPPLAGGFYYDSYMGSDSIKDDDYKPVEQEVNKIIKQKQKFERMVITKEEGLELFADNPFKVSILTTKVPDGGRTTVYRCGDLIDLCRGPHVPNTGKVKAFAATRHSATNWLG 251          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: A0A7S2SGE3_9STRA (Threonine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGE3_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.410e-52
Identity = 83/139 (59.71%), Postives = 107/139 (76.98%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLG 146
            K VFWHSSAH LG A+E  +G  LT GPP+ NGF+YD YMG  ++   D KD+D  V +  K KQTF+RL++TKEEAL++F+YN FK + I+TK+PDG  TTVYRNGD +DLCRGPH+P + +I+AF++ R SSTNWLG
Sbjct:  189 KMVFWHSSAHVLGEALEHTFGSFLTIGPPLANGFYYDSYMGDNTIHPPDFKDVDDAVKKIAKAKQTFERLVVTKEEALELFTYNPFKHQLISTKVPDGSRTTVYRNGDLIDLCRGPHIPSTGMIKAFSTLRGSSTNWLG 327          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: A0A067CSB6_SAPPC (Threonine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CSB6_SAPPC)

HSP 1 Score: 184 bits (468), Expect = 9.830e-52
Identity = 84/140 (60.00%), Postives = 106/140 (75.71%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLGK 147
            + VFWHSSAH LG  +E   GCHLT GPPV+ GF+YD YMG  ++ E +LKD++K  +   K+KQ F+R++LTKEEAL+MF+ N FK + I+TKIPDGG TT YR G  +DLCRGPHVP++  I+AF  TRTSST WLGK
Sbjct:  183 RMVFWHSSAHILGEGLELMKGCHLTIGPPVEGGFYYDSYMGENTIAEAELKDIEKRATAVVKEKQAFERIVLTKEEALEMFADNVFKTQIISTKIPDGGRTTAYRCGPLIDLCRGPHVPHTGKIKAFAVTRTSSTYWLGK 322          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: A0A7S3DX10_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX10_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.260e-51
Identity = 78/138 (56.52%), Postives = 106/138 (76.81%), Query Frame = 0
Query:    9 TVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLG 146
            TVFWHSSAH +G A+E  YGC LT GPP+  GF+YD YMG+ S+ + D K +++EV++  K+KQ F+R+++TKEE L++F+ N FK   + TK+PDGG TTVYR GD +DLCRGPHVP +  ++AF +TR S+TNWLG
Sbjct:  114 TVFWHSSAHMMGEALEHLYGCKLTIGPPLAGGFYYDSYMGSDSIKDDDYKPVEQEVNKIIKQKQKFERMVITKEEGLELFADNPFKVSILTTKVPDGGRTTVYRCGDLIDLCRGPHVPNTGKVKAFAATRHSATNWLG 251          
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Match: A0A485LGS8_9STRA (Threonine--tRNA ligase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LGS8_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.400e-51
Identity = 83/140 (59.29%), Postives = 108/140 (77.14%), Query Frame = 0
Query:    8 KTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGACSVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIATKIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLGK 147
            K VFWHSSAH LG  +E   GCHLT GPPV+ GF+YD YMG  +V E +LK+++K+ ++  K+KQ F+R++LTK+EAL++F+ N FK + I+TKIPDGG TT YR G  +DLCRGPHVP++  I+AF  TRTSST WLGK
Sbjct:  181 KMVFWHSSAHILGEGLELMKGCHLTIGPPVEGGFYYDSYMGDNTVAEHELKEIEKKATQVVKEKQAFERIVLTKDEALELFADNVFKTQIISTKIPDGGKTTAYRCGPLIDLCRGPHVPHTGKIKAFAVTRTSSTYWLGK 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60507.13595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFY0_ECTSI1.980e-8687.94Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A835YMV8_9STRA9.370e-7274.29Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
H6WB86_VAULI4.050e-6670.00Threonine--tRNA ligase n=1 Tax=Vaucheria litorea T... [more]
A0A7S2XW11_9STRA1.370e-5560.43Threonine--tRNA ligase (Fragment) n=1 Tax=Fibrocap... [more]
W7TCM5_9STRA2.810e-5359.29Threonine--tRNA ligase n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S2YSD7_9STRA5.650e-5356.52Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2SGE3_9STRA3.410e-5259.71Threonine--tRNA ligase n=1 Tax=Rhizochromulina mar... [more]
A0A067CSB6_SAPPC9.830e-5260.00Threonine--tRNA ligase n=3 Tax=Saprolegniaceae Tax... [more]
A0A7S3DX10_9STRA1.260e-5156.52Threonine--tRNA ligase (Fragment) n=1 Tax=Amphipro... [more]
A0A485LGS8_9STRA3.400e-5159.29Threonine--tRNA ligase n=2 Tax=Aphanomyces TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 108..149
e-value: 0.001
score: 28.3
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 109..143
e-value: 3.4E-8
score: 33.5
NoneNo IPR availableGENE3D3.30.980.10coord: 9..147
e-value: 6.3E-40
score: 139.0
NoneNo IPR availableGENE3D3.30.54.20coord: 70..125
e-value: 6.3E-40
score: 139.0
NoneNo IPR availablePANTHERPTHR11451:SF46FI05224Pcoord: 8..148
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 8..148
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 8..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60507contigH-elongata_contig60507:318..2681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60507.13595.1mRNA_H-elongata_contig60507.13595.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60507 318..2681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60507.13595.1 ID=prot_H-elongata_contig60507.13595.1|Name=mRNA_H-elongata_contig60507.13595.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MLVLYGFKTVFWHSSAHCLGLAMERKYGCHLTHGPPVDNGFFYDCYMGAC
SVGEKDLKDLDKEVSRCCKKKQTFDRLLLTKEEALDMFSYNAFKKEYIAT
KIPDGGCTTVYRNGDFVDLCRGPHVPYSTVIQAFNSTRTSSTNWLGKVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012947tRNA_SAD
IPR002320Thr-tRNA-ligase_IIa
IPR018163Thr/Ala-tRNA-synth_IIc_edit