prot_H-elongata_contig59642.13481.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59642.13481.1 vs. uniprot
Match: A0A6H5KJG2_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG2_9PHAE) HSP 1 Score: 195 bits (496), Expect = 9.660e-53 Identity = 200/409 (48.90%), Postives = 237/409 (57.95%), Query Frame = 0
Query: 1 VNVSTQEETDDAFLFHPTPRGVKSYCIIQRTSSTIRTYFRLFLQEHRPLGDP----------APPPPTSTTGLSAGSTXXXXXXXXXPXXXXXXXXXXXXXXXXXXXPS---------GGMETIRAFL--GGGXXXXXXXXXXXXXXXXXGATAGVGKFLLSSKRYRSARVRSATYIWGKNGVWKDKQALARVSTLPWGG-GKGVGTVSSPFLLGNRARPIASPAPSGSGAV------GSTAAASPPSGLAFDGSTLD-------------DDGSDG-KAQSPALSGSSGGGXXXXXXXXXXXXXRQGSRSKGLEGGGSPTCWAVVVNVQAEGEARLLSVTAIVPDPGAIMAGFGATSGSGGGS-------DQSLETAL-AEGLRSRERSGVSPQGTIILSSRQPQWSA 359
V+VS+ +E DD FL PTP+G+KSYCIIQRT STIRTYFRLFLQE RPL + A P T+T+G + G XXXXXXXXX XXXXXXXXXXXXX S GGMET+RAFL GGG XXXXXXXXXX G +FLLSSKRYRS R RSA+Y+W +NGVWKDK ALA+V+T PWGG GKG GT++SP L+G+ R + S A + DG D GSDG KAQSPALSGSS XXXXXX +GG +VVNVQAEGE +LLSV AIVPDP A ++ G+ +Q +++ L AEGLR E++GV P G I+L S+QP+WSA
Sbjct: 225 VDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDXXXXNASPTTTTTSGPATGVPXXXXXXXXXXXXXXXXXXXXXXXAFSATGGSASGGVTHSGGGMETLRAFLAVGGGGGSXXXXXXXXXX------AVGGAQFLLSSKRYRSTRPRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATAAXXXXXXXXXXXXXFSSVPAXXXXXXXSADGGXXXXXXXXXXISGSPGDVGSDGSKAQSPALSGSS----------XXXXXXXXXXXXXXXQGG-------LVVNVQAEGEGKLLSVAAIVPDPSASLSAPGSAXXXXXXXXXXXXXXEQMVDSGLLAEGLRKWEKAGVVPPGMIVLRSKQPKWSA 610
BLAST of mRNA_H-elongata_contig59642.13481.1 vs. uniprot
Match: D8LGZ8_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ8_ECTSI) HSP 1 Score: 182 bits (463), Expect = 1.500e-48 Identity = 194/389 (49.87%), Postives = 230/389 (59.13%), Query Frame = 0
Query: 1 VNVSTQEETDDAFLFHPTPRGVKSYCIIQRTSSTIRTYFRLFLQEHRPLGDPAP-----------------PPPTSTTGLSAGSTXXXXXXXXXPXXXXXXXXXXXXXXXXXXXPSGGMETIRAFLGGGXXXXXXXXXXXXXXXXXGATAGVGKFLLSSKRYRSARVRSATYIWGKNGVWKDKQALARVSTLPWGG-GKGVGTVSSPFLLGNRARPI-------ASPAPSGSGAVGSTAAASPPSGLAFDGSTLDDDGSDGKAQSPAL--SGSSGGGXXXXXXXXXXXXXRQGSRSKGLEGGGSPTCWAVVVNVQAEGEARLLSVTAIVPDPGAIMAGFGATSGSGGGS--DQSLETAL-AEGLRSRERSGVSPQGTIILSSRQPQWSA 359
V+VS+ +E DD FL PTP+G+KSYCIIQRT STIRTYFRLFLQE RPL + XXXXXXXXX XXXXXXXXXXXXXXXXXXX RA XXXXXXXXXXXXXXXXXGA G +FLLSSKRYRS + RSA+Y+W +NGVWKDK ALA+V+T PWGG GKG GT++SP L+G+ R ASP P G+ G TAA KA+ + +GS GG R +G+ GGSP CWAVVVNVQAEGE +LLSV AIVPDP A ++ G+ +Q +++ L AEGLR E++GV P G I+L S+QP+WSA
Sbjct: 155 VDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAXXXX-XXXXXXXXXXXXXXXXXGAVGGA-QFLLSSKRYRSTKPRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATAAXXXXASPGPRGT--WGRTAARL-------------------KARRCLVRAAGSVGGRRGGGAEEAQVGRGAGVRRPEGV--GGSPACWAVVVNVQAEGEGKLLSVAAIVPDPSASLSAPGSAXXXXXXXXXEQMVDSGLLAEGLRKWEKTGVVPPGMIVLRSKQPKWSA 518
BLAST of mRNA_H-elongata_contig59642.13481.1 vs. uniprot
Match: A0A835YQA2_9STRA (Tub domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA2_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 3.840e-5 Identity = 75/352 (21.31%), Postives = 119/352 (33.81%), Query Frame = 0
Query: 8 ETDDAFLFHPTPRGVKSYCIIQRTSSTIRTYFRLFLQEHRPLGDPAPPPPTSTTGLSAGSTXXXXXXXXXPXXXXXXXXXXXXXXXXXXXPSGGMETIRAFLGGGXXXXXXXXXXXXXXXXXGATAGVGKFLLSSKRYRSARVRSATYIWGKNGVWKDKQALARVSTLPWGGGKGVGTVSSPFLLGNRARPIASPAPSGSGAVGSTAAASPPSGLAFDGSTLDDDGSDGKAQSPALSGSSGGGXXXXXXXXXXXXXRQGSRSKGLEGGGSPTCWAVVVNVQAEGEARLLSVTAIVPDPGAIMAGFGATSGSGGGSDQSLETALAEGLRSRERSGVSPQGTIILSSRQPQWSA 359
E+D FL + ++ I+QR+ S +R Y+ + LQE L P PPP + +A + P + + A +FLLS++R R + + +++W +GVWKDKQA+A+V+ P G G LL + +A GS +GS A+ VNV + +RLLS+TA++PDP S +D E +L L+ +G P G ++L S++P+WSA
Sbjct: 169 ESDSGFLLQAAHKTTRTCTIVQRSRSRLRCYYNMALQEQIAL--PTPPPCDNMCINAAAAVSVKFRVCAHLPSPPPAGSHSGPGSETSTPPMSDLSAVGA--------KRPSLLALRLGPQKDPLMENTRFLLSTRRGRGGKPMAVSHMWNTSGVWKDKQAMAKVTVQP-GPAAAAGATHVSRLLSEKRAAVA-----GSALIGS---------------------------------------------------------------------AIAVNVVTDASSRLLSITAVIPDP--------QDEPSPASTD---EASLLAVLQLATAAGAPPPGFLLLQSKKPRWSA 424 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59642.13481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig59642.13481.1 ID=prot_H-elongata_contig59642.13481.1|Name=mRNA_H-elongata_contig59642.13481.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=359bpback to top |