prot_H-elongata_contig59618.13476.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59618.13476.1
Unique Nameprot_H-elongata_contig59618.13476.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length131
Homology
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 2.070e-49
Identity = 95/133 (71.43%), Postives = 107/133 (80.45%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQA--RRYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VVVASNFTSALDVL  LAERN WGF RLDG T ++ARQ LVDRFNRA   DLFLF LS +AGGVGLNL+GANRIVL+DSDWNPATDDQA  R +   +T+E        VSMYRL+STGTLEE+I+QRQIFK
Sbjct:  777 KVVVASNFTSALDVLETLAERNAWGFLRLDGGTTTNARQNLVDRFNRASPEDLFLFYLSTKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKE--------VSMYRLLSTGTLEESIFQRQIFK 901          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 9.910e-49
Identity = 94/133 (70.68%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQA--RRYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VVVASNFTSALDVL  LAERN WGF RLDG T ++ RQ LVDRFNRA   DLFLF LSA+AGGVGLNL+GANRIVL+DSDWNPATDDQA  R +   +T+E        V MYRL+STGTLEE+I+QRQIFK
Sbjct:  747 KVVVASNFTSALDVLETLAERNSWGFLRLDGGTTTNERQNLVDRFNRASPEDLFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKE--------VCMYRLLSTGTLEESIFQRQIFK 871          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: A0A7S1FQD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQD2_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.080e-39
Identity = 78/133 (58.65%), Postives = 94/133 (70.68%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQ--ARRYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VVV+SNFTS LD+L    E  GW F+RLDGST S  RQ +VD FNR  A   F FLLSARAGG GLNL+GA+R+++YD DWNPATD Q  AR Y T +T+ TT        +YRL +TGT+EE +YQRQI K
Sbjct:  134 KVVVSSNFTSVLDILARHLEMRGWTFQRLDGSTCSEKRQEMVDVFNRTSAEQNFCFLLSARAGGCGLNLVGASRLIMYDPDWNPATDLQTMARIYRTGQTKPTT--------IYRLFTTGTVEEIVYQRQIQK 258          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: A0A066VQ34_TILAU (Uncharacterized protein n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066VQ34_TILAU)

HSP 1 Score: 142 bits (357), Expect = 1.330e-36
Identity = 75/132 (56.82%), Postives = 94/132 (71.21%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQAR-RYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VVV SNFTS LD++  L ER GW   RLDG T +  RQ LV+ FNR+PA   F+FLLSA++GGVGLNLIGANR+VL+DSDWNP+TD QA  R H    R+    P F   +YR++  GT++E IYQRQ+ K
Sbjct:  688 KVVVVSNFTSTLDIIEFLCERRGWPLLRLDGKTKTETRQELVNEFNRSPASSSFVFLLSAKSGGVGLNLIGANRLVLFDSDWNPSTDKQAMARIH----RDGQKKPCF---IYRMLLAGTMDEKIYQRQLSK 812          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: A0A7S2W8P1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8P1_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.880e-34
Identity = 74/134 (55.22%), Postives = 95/134 (70.90%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGD-LFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQ--ARRYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VV+ SNFT+ALD+   +A+ +GW + RLDGST    RQ LVDR NR   GD LFLFLLS+ AGGVGLNL+GA+R+VL+D+DWNPA D Q  AR +   + R     P F   +YRL+ TGT+EE +YQRQ+ K
Sbjct:  593 RVVLVSNFTTALDLFEAMADHHGWQYVRLDGSTPQQERQALVDRCNRRVPGDNLFLFLLSSHAGGVGLNLVGASRLVLFDTDWNPAVDKQVMARVWRNGQRR-----PVF---IYRLLCTGTIEEKMYQRQLSK 718          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: A0A8H3TRU6_9TREE (Uncharacterized protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TRU6_9TREE)

HSP 1 Score: 133 bits (334), Expect = 1.680e-33
Identity = 72/132 (54.55%), Postives = 92/132 (69.70%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQAR-RYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            ++V+ SN+TS LDVL  L     +   RLDGSTA  +RQ  VD+FNR+    +F+FLLSA+AGGVGLNLIGA+R+VL+DSDWNP+TD QA  R H    +         V +YRLV+TGT+EE IYQRQ+ K
Sbjct:  668 KIVLVSNYTSTLDVLEKLCRNKRYKHLRLDGSTAQKSRQEYVDKFNRSDQRQVFVFLLSAKAGGVGLNLIGASRLVLFDSDWNPSTDLQAMARIHRDGQKHP-------VHIYRLVTTGTIEEKIYQRQVTK 792          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: A0A2K1K7S9_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7S9_PHYPA)

HSP 1 Score: 132 bits (333), Expect = 2.280e-33
Identity = 74/131 (56.49%), Postives = 91/131 (69.47%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQARRYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VVV SNFT  LD++  +    GW + RLDGST +S RQ LVD+ N    GD+F+FLLS++AGG GLNLIGANR+VL+D DWNPATD QA        RE    P   V +YRL+STG++EE IYQRQI K
Sbjct:  860 RVVVVSNFTRTLDLIQDMCTSQGWNWLRLDGSTEASKRQLLVDQLNSG-VGDVFVFLLSSKAGGTGLNLIGANRLVLFDPDWNPATDSQAI---ARIWREGQLKP---VLIYRLLSTGSIEEKIYQRQIMK 983          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: W9W8J3_9EURO (Uncharacterized protein n=2 Tax=Cladophialophora TaxID=82105 RepID=W9W8J3_9EURO)

HSP 1 Score: 131 bits (330), Expect = 5.730e-33
Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQA-RRYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VVV SN+TS L+++  LA  +   F RLDGS A+  RQ LVD+FNR+ A   FLFLLSA+AGGVGLNLIGANR+VL+D DWNPATDDQA  R H    +        +  +YR +  G LEE I+QRQ+ K
Sbjct:  626 KVVVISNYTSTLNLIQQLAANSNLSFLRLDGSVAAKKRQALVDKFNRSTASQCFLFLLSAKAGGVGLNLIGANRLVLFDVDWNPATDDQAVARIHRQGQQR-------HCKIYRFLIKGGLEERIWQRQVVK 750          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: UPI001DC49AF8 (DNA repair and recombination protein RAD54B n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001DC49AF8)

HSP 1 Score: 131 bits (330), Expect = 5.730e-33
Identity = 69/133 (51.88%), Postives = 95/133 (71.43%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQA--RRYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VV+ SN+TS LD+LG L +   + + RLDG+TA + RQ LVDRFNR+P  + F+FLLSA+AGGVGLNLIGA+R+V++D DWNP+TD QA  R +   +TR           +YRL++ G L+E I+QRQ+ K
Sbjct:  641 KVVLVSNYTSTLDILGNLLDSMSYKYIRLDGTTAQNKRQDLVDRFNRSPRSNSFVFLLSAKAGGVGLNLIGASRLVMFDLDWNPSTDVQAMARIHRDGQTRP--------CHIYRLLTQGALDEKIFQRQVSK 765          
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Match: M2N0P1_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2N0P1_BAUPA)

HSP 1 Score: 131 bits (329), Expect = 7.820e-33
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 0
Query:    1 QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPAGDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQAR-RYHTSETRETTAAPFFYVSMYRLVSTGTLEENIYQRQIFK 131
            +VV+ SN+T+ +D+LG L     + + RLDGST +  RQ LVDRFNR+P  + F+FLLSA+AGGVGLNLIGA+R++L+D DWNPATD QA  R H    R+    P F   +YRLV+ G L+E I+QRQ+ K
Sbjct:  632 KVVLVSNYTATMDILGNLLSSLSYRYLRLDGSTPAGKRQELVDRFNRSPPSNSFVFLLSAKAGGVGLNLIGASRLILFDLDWNPATDLQAMARVH----RDGQKRPCF---IYRLVTQGALDEKIFQRQVSK 756          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59618.13476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS0_ECTSI2.070e-4971.43SNF2-related domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JTI7_9PHAE9.910e-4970.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1FQD2_9STRA2.080e-3958.65Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A066VQ34_TILAU1.330e-3656.82Uncharacterized protein n=1 Tax=Tilletiaria anomal... [more]
A0A7S2W8P1_9STRA1.880e-3455.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8H3TRU6_9TREE1.680e-3354.55Uncharacterized protein n=1 Tax=Naganishia liquefa... [more]
A0A2K1K7S9_PHYPA2.280e-3356.49Uncharacterized protein n=5 Tax=Physcomitrium pate... [more]
W9W8J3_9EURO5.730e-3354.55Uncharacterized protein n=2 Tax=Cladophialophora T... [more]
UPI001DC49AF85.730e-3351.88DNA repair and recombination protein RAD54B n=1 Ta... [more]
M2N0P1_BAUPA7.820e-3353.79Uncharacterized protein n=1 Tax=Baudoinia panameri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 13..94
e-value: 3.4E-7
score: 39.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 1..91
e-value: 3.9E-10
score: 40.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..131
score: 11.375
NoneNo IPR availableGENE3D3.40.50.300coord: 1..131
e-value: 3.7E-46
score: 159.7
NoneNo IPR availablePANTHERPTHR45629:SF3DNA REPAIR AND RECOMBINATION PROTEIN RAD54Bcoord: 2..131
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 2..131
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59618contigH-elongata_contig59618:149..1273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59618.13476.1mRNA_H-elongata_contig59618.13476.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59618 149..1273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59618.13476.1 ID=prot_H-elongata_contig59618.13476.1|Name=mRNA_H-elongata_contig59618.13476.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp
QVVVASNFTSALDVLGCLAERNGWGFERLDGSTASSARQRLVDRFNRAPA
GDLFLFLLSARAGGVGLNLIGANRIVLYDSDWNPATDDQARRYHTSETRE
TTAAPFFYVSMYRLVSTGTLEENIYQRQIFK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase