prot_H-elongata_contig58539.13342.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58539.13342.1
Unique Nameprot_H-elongata_contig58539.13342.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
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BLAST of mRNA_H-elongata_contig58539.13342.1 vs. uniprot
Match: A0A6H5L7V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V8_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 7.300e-49
Identity = 85/119 (71.43%), Postives = 98/119 (82.35%), Query Frame = 0 
Query:    3 QLYVQAYACQVFRDDASAQAVEDGAHLRTLTTPQDPEGASLMLDRFDVRWMLDLADFNKGSCTSIPDTLREEEKKADSLRYTGLPTGDHSVLVEGLGMFAPTGSYAHD-RHGGLGGDEE 120
            QLYVQ+YACQVFRDD +A AV+DGAHLR LT PQDPEG  LMLDRFD RWMLDL+DF+KG+  ++P  L  EE+KAD LRY GLP+GDHS++VEGLG FAPTGSYAH    GGLG +EE
Sbjct:   51 QLYVQSYACQVFRDDPAATAVQDGAHLRPLTVPQDPEGEPLMLDRFDARWMLDLSDFSKGTGFALPAKLAAEERKADGLRYDGLPSGDHSLVVEGLGQFAPTGSYAHGGSRGGLGDEEE 169
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BLAST of mRNA_H-elongata_contig58539.13342.1 vs. uniprot
Match: D7FJ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ62_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 1.090e-48
Identity = 84/118 (71.19%), Postives = 97/118 (82.20%), Query Frame = 0 
Query:    3 QLYVQAYACQVFRDDASAQAVEDGAHLRTLTTPQDPEGASLMLDRFDVRWMLDLADFNKGSCTSIPDTLREEEKKADSLRYTGLPTGDHSVLVEGLGMFAPTGSYAHDRHGGLGGDEE 120
            QLYVQ+YACQVFRDD +A AV+DGAHLR LT PQDPEG  LMLDRFD RWMLDL+DF+KG+ +++P  L  EE+KAD LRY GLP+GDHS++VEGLG FAPTGSYAH    G  GDEE
Sbjct:   44 QLYVQSYACQVFRDDPAATAVQDGAHLRPLTVPQDPEGEPLMLDRFDARWMLDLSDFSKGTGSALPVKLEAEERKADGLRYEGLPSGDHSLVVEGLGQFAPTGSYAHGGSRGGLGDEE 161
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BLAST of mRNA_H-elongata_contig58539.13342.1 vs. uniprot
Match: A0A835Z316_9STRA (SURP motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z316_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 6.150e-14
Identity = 50/126 (39.68%), Postives = 67/126 (53.17%), Query Frame = 0 
Query:    3 QLYVQAYACQVFRDDASAQAVEDGAHLRTLTTPQDPEGASLMLDRFDVRWMLDLADFNKGSCTSIPDTLR----------EEEKKADSL---RYTGLPTGDHSVLVEGLGMFAPTGSYAHDRHGGL 115
            +++VQ YAC+V+R+DA AQ  EDG HLR + TP       L+LDR+D RW LD  D       ++PD             +E+  AD+L   RY      DHS+    LG +AP+GSY    HG L
Sbjct:   23 RIFVQGYACEVYRNDALAQQFEDGTHLRRMLTPF-VSAEPLLLDRYDGRWNLDPTDL-----ATLPDGRETESDTEWIADDEDVDADTLNQLRYADAVEEDHSIERLWLGKYAPSGSYVQG-HGWL 141
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58539.13342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L7V8_9PHAE7.300e-4971.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ62_ECTSI1.090e-4871.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z316_9STRA6.150e-1439.68SURP motif domain-containing protein n=1 Tax=Tribo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019147Suppressor of white apricot, N-terminal domainSMARTSM01141DRY_EERY_2coord: 2..119
e-value: 7.1E-4
score: 9.0
IPR019147Suppressor of white apricot, N-terminal domainPFAMPF09750DRY_EERYcoord: 4..91
e-value: 2.4E-11
score: 44.1
IPR040397Suppressor of white apricotPANTHERPTHR13161SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTcoord: 3..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58539contigH-elongata_contig58539:1602..3390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58539.13342.1mRNA_H-elongata_contig58539.13342.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58539 1575..3390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58539.13342.1 ID=prot_H-elongata_contig58539.13342.1|Name=mRNA_H-elongata_contig58539.13342.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MAQLYVQAYACQVFRDDASAQAVEDGAHLRTLTTPQDPEGASLMLDRFDV
RWMLDLADFNKGSCTSIPDTLREEEKKADSLRYTGLPTGDHSVLVEGLGM
FAPTGSYAHDRHGGLGGDEEAST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019147SWAP_N_domain
IPR040397SWAP