prot_H-elongata_contig57911.13265.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57911.13265.1
Unique Nameprot_H-elongata_contig57911.13265.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: D7G5W8_ECTSI (Putative homoaconitate hydratase, c-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W8_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 3.710e-45
Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLKV 92
            AKY+SK+ YD++ LEPVVAKPHSPDN+ALAK+CR  KIDRVYIGSCTGGKTEDFAAAARILQN+K    VRVPTFLVPATQKVYND+QTLK+
Sbjct:   83 AKYFSKKRYDMSNLEPVVAKPHSPDNKALAKDCRGTKIDRVYIGSCTGGKTEDFAAAARILQNQK----VRVPTFLVPATQKVYNDIQTLKI 170          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: A0A6H5KHV3_9PHAE (3-isopropylmalate dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV3_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 2.690e-44
Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLKV 92
            AKY+SK++YD++ LEPVVAKPHSPDN+ALAK+CRD KIDRVYIGSCTGGKTEDFAAAARILQN+K    VRVPTFLVPATQKVYND+QTLK+
Sbjct:  340 AKYFSKKTYDMSNLEPVVAKPHSPDNKALAKDCRDTKIDRVYIGSCTGGKTEDFAAAARILQNQK----VRVPTFLVPATQKVYNDIQTLKI 427          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: X2KY86_SCYLO (3-isopropylmalate dehydratase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY86_SCYLO)

HSP 1 Score: 154 bits (390), Expect = 1.370e-42
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLKV 92
            AKY+SKQ YD+  LEPVVAKPHSPDN+ALA++CRD KIDRVYIGSCTGGKTEDFAAAARILQN+K    VRVPTFLVPATQKVYND+QT+ +
Sbjct:  359 AKYFSKQRYDVGNLEPVVAKPHSPDNKALARDCRDTKIDRVYIGSCTGGKTEDFAAAARILQNQK----VRVPTFLVPATQKVYNDIQTMTI 446          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: A0A835YVF1_9STRA (3-isopropylmalate dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF1_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.770e-39
Identity = 68/92 (73.91%), Postives = 81/92 (88.04%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLKV 92
            A Y++ ++YD+++LEPVVA PHSPDN+ALAK+CRD KIDRVYIGSCTGGKTEDFAAAAR+L  +K    VRVPTFLVPATQKVYND+Q LK+
Sbjct:  288 ATYFADKTYDMSQLEPVVAMPHSPDNKALAKDCRDTKIDRVYIGSCTGGKTEDFAAAARVLDGQK----VRVPTFLVPATQKVYNDIQNLKI 375          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: W7TZ20_9STRA (3-isopropylmalate dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ20_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.570e-38
Identity = 69/90 (76.67%), Postives = 78/90 (86.67%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTL 90
            A Y++K +YDL+ LEPVVAKPHSPDNRALA+ECRDIKIDRVYIGSCTGGKTEDF AAARILQ  K S    VPTFLVPAT++VY+DL +L
Sbjct:  322 ASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVS----VPTFLVPATRRVYDDLYSL 407          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: A0A6P1AAH6_9CYAN (3-isopropylmalate dehydratase large subunit n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P1AAH6_9CYAN)

HSP 1 Score: 140 bits (352), Expect = 8.850e-38
Identity = 65/91 (71.43%), Postives = 81/91 (89.01%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLK 91
            AK+YS ++YD+++LEPVVAKPHSPDNRALA+ECRD+KIDRVYIGSCTGGKT DF  AAR+L+ +K    V+VPT++VPATQKVY+DL T+K
Sbjct:  267 AKFYSDRTYDVSQLEPVVAKPHSPDNRALARECRDVKIDRVYIGSCTGGKTSDFLNAARVLKGRK----VKVPTYIVPATQKVYDDLFTVK 353          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: K9TYF3_CHRTP (Homoaconitate hydratase family protein n=26 Tax=Cyanobacteria TaxID=1117 RepID=K9TYF3_CHRTP)

HSP 1 Score: 137 bits (346), Expect = 6.650e-37
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLK 91
            AK+YS + YD+++LEPVVA+PHSPDNRALA+EC D+KIDRVYIGSCTGGKTEDF  AA IL+ ++    V+VPT+LVPATQKVYNDL TLK
Sbjct:  267 AKFYSDRRYDVSQLEPVVAQPHSPDNRALARECSDVKIDRVYIGSCTGGKTEDFIHAAHILKGQQ----VKVPTYLVPATQKVYNDLFTLK 353          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: A0A2T1E8G0_9CHRO (3-isopropylmalate dehydratase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T1E8G0_9CHRO)

HSP 1 Score: 136 bits (342), Expect = 2.590e-36
Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLK 91
            AK+YS  SYD+++LEPVVAKPHSPDNRALA+EC D+KIDRVYIGSCTGGKT DF  AA+IL+ +K    V+VPT+LVPATQKVY DL T K
Sbjct:  267 AKFYSSHSYDVSQLEPVVAKPHSPDNRALARECSDVKIDRVYIGSCTGGKTTDFINAAQILKGQK----VKVPTYLVPATQKVYEDLFTQK 353          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: A0A1U7IRT4_9CYAN (3-isopropylmalate dehydratase n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A1U7IRT4_9CYAN)

HSP 1 Score: 135 bits (341), Expect = 3.620e-36
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLK 91
            AK+YS+  YD++KLEPVVAKPHSPDNRALAKEC D+KI+RVYIGSCTGGKT DF  AARI++  K    V+VPT+LVPATQKVY DL T K
Sbjct:  267 AKFYSQHHYDVSKLEPVVAKPHSPDNRALAKECSDVKINRVYIGSCTGGKTSDFLNAARIIKGHK----VKVPTYLVPATQKVYEDLFTQK 353          
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Match: A0A446W303_TRITD (Uncharacterized protein n=2 Tax=Poaceae TaxID=4479 RepID=A0A446W303_TRITD)

HSP 1 Score: 131 bits (329), Expect = 5.320e-36
Identity = 62/92 (67.39%), Postives = 77/92 (83.70%), Query Frame = 0
Query:    1 AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGKTEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLKV 92
            A++YS   +D++KLEPVVAKPHSPDNRALA+EC+D+KIDRVYIGSCTGGKTEDF AAA++     +   V+VPTFLVPATQKV+ D+ +L V
Sbjct:   76 ARFYSDYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFIAAAKVFL--ASGQKVKVPTFLVPATQKVWMDVYSLPV 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57911.13265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5W8_ECTSI3.710e-4581.52Putative homoaconitate hydratase, c-terminal part ... [more]
A0A6H5KHV3_9PHAE2.690e-4482.613-isopropylmalate dehydratase n=1 Tax=Ectocarpus s... [more]
X2KY86_SCYLO1.370e-4280.433-isopropylmalate dehydratase n=1 Tax=Scytosiphon ... [more]
A0A835YVF1_9STRA2.770e-3973.913-isopropylmalate dehydratase n=1 Tax=Tribonema mi... [more]
W7TZ20_9STRA3.570e-3876.673-isopropylmalate dehydratase n=2 Tax=Monodopsidac... [more]
A0A6P1AAH6_9CYAN8.850e-3871.433-isopropylmalate dehydratase large subunit n=2 Ta... [more]
K9TYF3_CHRTP6.650e-3772.53Homoaconitate hydratase family protein n=26 Tax=Cy... [more]
A0A2T1E8G0_9CHRO2.590e-3672.533-isopropylmalate dehydratase n=2 Tax=Cyanobacteri... [more]
A0A1U7IRT4_9CYAN3.620e-3672.533-isopropylmalate dehydratase n=6 Tax=Cyanobacteri... [more]
A0A446W303_TRITD5.320e-3667.39Uncharacterized protein n=2 Tax=Poaceae TaxID=4479... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015931Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3GENE3D3.30.499.10coord: 19..92
e-value: 4.2E-20
score: 74.0
IPR001030Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainPFAMPF00330Aconitasecoord: 32..88
e-value: 4.7E-9
score: 35.8
NoneNo IPR availablePANTHERPTHR43822FAMILY NOT NAMEDcoord: 1..92
NoneNo IPR availablePANTHERPTHR43822:SF11coord: 1..92
IPR036008Aconitase, iron-sulfur domainSUPERFAMILY53732Aconitase iron-sulfur domaincoord: 1..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57911contigH-elongata_contig57911:761..3399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57911.13265.1mRNA_H-elongata_contig57911.13265.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57911 761..3399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57911.13265.1 ID=prot_H-elongata_contig57911.13265.1|Name=mRNA_H-elongata_contig57911.13265.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
AKYYSKQSYDLNKLEPVVAKPHSPDNRALAKECRDIKIDRVYIGSCTGGK
TEDFAAAARILQNKKASSTVRVPTFLVPATQKVYNDLQTLKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015931Acnase/IPM_dHydase_lsu_aba_1/3
IPR001030Acoase/IPM_deHydtase_lsu_aba
IPR036008Aconitase_4Fe-4S_dom