prot_H-elongata_contig57281.13193.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57281.13193.1
Unique Nameprot_H-elongata_contig57281.13193.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig57281.13193.1 vs. uniprot
Match: A0A6H5KX58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX58_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 2.170e-45
Identity = 80/119 (67.23%), Postives = 99/119 (83.19%), Query Frame = 0
Query:    1 VCIQRNLNGSCKQSGIGGREAAEEIVGVSKEAPAQEA-ENELIVKLRKRTLENKARNDEEIATKTFANGQSGEFGPFSRYVPVKHQDTGKFELVLVRELDDMKKAGLIVKERGQDVFVD 118
            VC+QR LNG+C + G+   +  EE+  +S +APAQE  E+EL+  L++RT+ENKA+NDEEIATKTFANGQSGEFGPFSRYVPVKH+DTGKFELVL+ EL++MK+ GLIV ER  DVFVD
Sbjct:   87 VCLQRGLNGACVKFGVD--DTMEEVASISTKAPAQEEPESELMATLKRRTIENKAKNDEEIATKTFANGQSGEFGPFSRYVPVKHKDTGKFELVLISELEEMKRNGLIVSERLGDVFVD 203          
BLAST of mRNA_H-elongata_contig57281.13193.1 vs. uniprot
Match: A0A836CIW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW7_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.900e-21
Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 0
Query:    1 VCIQRN-LNGSCKQSGIGGREAAEEIVGVSKEAPA--------------QEAENELIVKLRKRTLENKARNDEEIATKTFANGQSGEFGPFSRYVPVKHQDTGKFELVLVRELDDMKKAGLIVKERGQDVFVDTQE 121
            +C++R+ +NG C++        ++E+V +   A +              +E E++LI +LR++T+ENKA+N+  +A KTF N Q+GEFGPFSRYV VK  + GK+ELVL+R+LDD+K+ G+I  E     FV  +E
Sbjct:   84 ICVKRSAINGRCEKY-------SDEVVPLDASASSNRTKVDRVKRTVVQEEPESDLIKRLRQKTVENKAKNEAMVAEKTFMNNQAGEFGPFSRYVLVKRPNDGKYELVLIRDLDDLKRQGII--ESSGKAFVPGKE 210          
BLAST of mRNA_H-elongata_contig57281.13193.1 vs. uniprot
Match: A0A7S2Y4S0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4S0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.010e-13
Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = 0
Query:    1 VCIQRNLNGSC-----------KQSGIGG--REAAEEIVGVSKEAPAQEAENELIVKLRKRTLENKARNDEEIATKTFANGQSGEFGPFSRYVPVKHQDTGKFELVLVRELDDMKKAGLI 107
            +C++RN+ G C           KQ+ +    ++  +E    SK+   +EA+ +LI +L K++ ENK  ND  +A KTF   + G+FGPFSRYVPV+H D G +EL+   E   +KK G +
Sbjct:   85 ICLKRNVIGRCDRWVGDDLPEEKQNSVKDSMKKRTQENEAKSKQLAEKEAKGDLIEELLKKSAENKVENDRLVAEKTFLASEPGQFGPFSRYVPVRHFD-GTYELLTYPEYRKLKKQGKV 203          
BLAST of mRNA_H-elongata_contig57281.13193.1 vs. uniprot
Match: A0A7S3JN45_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JN45_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.620e-12
Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 0
Query:    1 VCIQRNLNGSCKQSGIGGREAAEEIVGVSKEAPA-----QEAENELIVKLRKRTLENKARNDEEIATKTFANGQSGEFGPFSRYVPVKHQDTGKFELVLVRELDDMKKAGLIVKERGQDVFVDTQETK 123
            VC +R + G C +        A    G  K + A     +E+ +ELI +LRK++ EN+ RND +I  ++FAN QSG FGPFSRY PV   D G F LVL R+ + +KK   IV       FVD  + K
Sbjct:   66 VCGRRGILGKCIEDATESDTIAPSS-GSGKASGARLLEREESSSELIDRLRKQSEENRVRNDRKIELESFANSQSGLFGPFSRYEPVMKTD-GSFVLVLARDFERLKKEKRIV----DGCFVDDADAK 187          
BLAST of mRNA_H-elongata_contig57281.13193.1 vs. uniprot
Match: A0A7S4A8G9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8G9_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.140e-12
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   35 QEAENELIVKLRKRTLENKARNDEEIATKTFANGQSGEFGPFSRYVPVKHQDTGKFELVLVRELDDMKKAGLIVKERGQD 114
            QE E+ L+ +LR+RT  N  +N  ++  + F N QSGEFGPFSR+VPV   D GK+ LVL  E +D+KK   + K++  D
Sbjct:   60 QELESPLVAELRRRTAANAEKNARQVELQMFQNSQSGEFGPFSRFVPVAKND-GKYVLVLAGEYEDLKKQKKVAKQKFLD 138          
BLAST of mRNA_H-elongata_contig57281.13193.1 vs. uniprot
Match: W7TJZ7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJZ7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.510e-7
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   40 ELIVKLRKRTLENKARNDEEIATKTFANGQSGEFGPFSRYVPVKHQDTGKFELVLVRELDDMKKAGLIVKERGQDVFVDTQ 120
            +L+  L++RT++NKA+ND  +  KTF N ++G +GPF +++PV  +D G++ L+   + + +K  G IV   G+D  VD Q
Sbjct:  101 DLVETLKRRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMKKD-GQYVLLTEDQYNTLKGEGKIV---GRDFVVDYQ 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57281.13193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KX58_9PHAE2.170e-4567.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIW7_9STRA4.900e-2140.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2Y4S0_9STRA3.010e-1337.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3JN45_9STRA1.620e-1240.63Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4A8G9_9STRA2.140e-1246.25Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W7TJZ7_9STRA1.510e-738.27Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57281contigH-elongata_contig57281:581..2206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57281.13193.1mRNA_H-elongata_contig57281.13193.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57281 581..2206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57281.13193.1 ID=prot_H-elongata_contig57281.13193.1|Name=mRNA_H-elongata_contig57281.13193.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
VCIQRNLNGSCKQSGIGGREAAEEIVGVSKEAPAQEAENELIVKLRKRTL
ENKARNDEEIATKTFANGQSGEFGPFSRYVPVKHQDTGKFELVLVRELDD
MKKAGLIVKERGQDVFVDTQETK*
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