prot_H-elongata_contig56820.13132.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56820.13132.1
Unique Nameprot_H-elongata_contig56820.13132.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length370
Homology
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI)

HSP 1 Score: 592 bits (1525), Expect = 2.360e-196
Identity = 300/372 (80.65%), Postives = 331/372 (88.98%), Query Frame = 0
Query:    9 RFLPTP---FPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQVDDDYIQIVEGAMEDSREALKR-CKD----MDPRMPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNPDK 370
            R+L  P   F GMWTTMD+SGNFGHE FSL+LH LQD+VPPQQLLKVWTHR+MDAVS VGVDINHA EHEHA GVLQFVPGLGPRKA KLRE+LGT  +GGVVPSRKALLSSQVLKSLVYTNAAGFLRIR+RGKL E+++ QLDPFDDTRVHPECYNTQDWAQR+CANALDVQV+DDY  IVE AM+DSREAL+R C+     +DPRMPP +LNDSVNQLDL+AYADEL+RQGEGKRA QLD IVEEIRYP  DRR+PY+ P E+ELF WLTGETDATLREGVLVPVR+M+H DAGVRVR+EGG GLFGFVP DYVTDDVLP DPITGQ A+L+ VVK NQ+MEAAIIKVDK RFELKLSLRKSDT+P+PDK
Sbjct: 1138 RYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTV-LGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQVEDDYFPIVESAMDDSREALQRLCQQGESGVDPRMPPNNLNDSVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKGRFELKLSLRKSDTMPDPDK 1508          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE)

HSP 1 Score: 517 bits (1332), Expect = 3.390e-179
Identity = 272/384 (70.83%), Postives = 296/384 (77.08%), Query Frame = 0
Query:    6 GKRRFLPTP---FPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQVDDDYIQIVEGAMEDSREALKRCKDMDPRMPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP----------------DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNPDK 370
            G  R+L  P   F GMWTTMD+SGNFGHE FSL+LHPLQD+VPPQQLLKVWTHR+MDAVS VGVDINHA EHEHA G+LQFVPGLGPRKA KLRE+LGT  +GGVVPSRKALLSSQVLKSLVYTNAAGFLRIR+RGKL E+++ QLDPFDDTRVHPECYNTQDWAQR+CANALDVQ                                      VNQLDL+AYADEL+RQGEGKRA QLD IVEEIRYP                DRR+PY+ P E+ELF WLTGETDATLREGVLVPVR+M+H DAGVRVR+EGG GLFGFVP DYVTDDVLP DPITGQ      VVK NQ+MEAAIIKVDK RFELKLSLRKSDT+P+PDK
Sbjct:  178 GLARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHPLQDQVPPQQLLKVWTHRMMDAVSAVGVDINHAAEHEHAVGLLQFVPGLGPRKAFKLRERLGTV-LGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQ--------------------------------------VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNDEMINQMVVHVDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQG-----VVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK 517          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A836C842_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C842_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.200e-87
Identity = 176/391 (45.01%), Postives = 225/391 (57.54%), Query Frame = 0
Query:   13 TPFPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQVDDDYIQIVE----------------------------GAMEDSREALKRCKDMDP----RMPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEG-GVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNP 368
            T  P       +SG FGHE  SL+LHPLQ  V   QLL+    RL+DAV++VGVDIN A E EH  G+LQFV GLGPRKAA LR  +  + +GGV+ SR+ LL  ++L    YTNAA FLRIRKRG+L ER D  ++PFDDTR+H ECY    WA+++CANALDV                                         M+DSRE L+   D DP      P   L D + +LDL  +A ELERQG GKR MQL+ + +EIR+P  +RR P+    ++++F W+TGE DATLR G++V   V  H   GVR  +EG    L GF+P D + DD LP D      A+L  +   N +  A I  + KPRFE++LSLR+SDT  NP
Sbjct:  281 TLLPXXXXXRGSSGEFGHEMLSLRLHPLQGEVTKGQLLRALEQRLIDAVNEVGVDINMACEKEHMRGMLQFVAGLGPRKAAALRTGISQS-LGGVINSRRQLLDRKLLGPSTYTNAASFLRIRKRGRLEERDD--INPFDDTRIHTECYIKHHWARQICANALDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIMDDSREVLRATLDRDPDWRPENPESELKDKLEELDLVEFAGELERQGLGKRRMQLEAVKDEIRFPYRERRRPFQRASDDDVFEWITGEDDATLRPGMVVTCSVSGHTRGGVRATVEGLSRALLGFIPMDKLQDDPLPPD------ADLALMFPRNSIRSAVIADIRKPRFEVQLSLRRSDTQQNP 662          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S2XPZ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPZ0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.770e-51
Identity = 136/377 (36.07%), Postives = 196/377 (51.99%), Query Frame = 0
Query:   19 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ--------VDDDYIQI--VEGAMEDSREALKRCKDM------------------DPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSD 363
            W+    +G FG E   L +HPLQ  +P   LL+ +   L +AV++VGVDIN A  ++H  G+L FVPGLGPRKAA L++ +    +GGVV SR+ALL  ++L  +VY NA  FLRIR+  +L  ++   L P DDTR+HP+ Y+  +WA ++  +AL++          D + I I  +   M+DS + +KR  D                   DPR+  P  S  D V +LDL  +A  +E+ G GK    L  I  E R P  D R P        LF  LTGETD +L  G  V  +V+++ D G R+++EG +    FVP   ++D+ + S             V V  V+ A + +V K    + LSLR  D
Sbjct:   54 WSVASDAGVFGTELLFLNIHPLQQLLPKPLLLRQYERVLCNAVAEVGVDINAACTYDHIHGMLSFVPGLGPRKAASLKQTI--IRIGGVVASRRALLQKRLLGPIVYNNAVAFLRIRETDQLANQL---LHPLDDTRLHPDVYHRNNWAVKIAVDALELGDGAGGEGGSDKESIAITALRDVMQDSHDQVKRLFDATKAEWEIAYGPSFNVSAWDPRVSVPTDSWRDKVEELDLETFAKMIEQSGLGKWLSHLIMIKWEFRLPFEDPRKPMEPLSGERLFRLLTGETDQSLCPGKEVTGKVVRNGDFGSRIKLEGEIP--AFVPLRNLSDENVESAD---------DFVTVGSVVTAVVTEVKKDHMCVDLSLRMED 414          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S3HQM4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQM4_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.210e-51
Identity = 136/391 (34.78%), Postives = 198/391 (50.64%), Query Frame = 0
Query:   19 WTTMDTSGNFGHETFSLKLHPLQDRVP--PQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDV-QVDDDYIQIVEGAMEDSREALKRCKD----------------------------MDPRMPP--ISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVR------------VRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKS 362
            W    +   FG+E   L +HPL+  +    Q LL     RL+DAV DVGVDIN A  ++H A +L FV GLG RKA  LR+ +  +     + SR  LL  ++L S V+TNAAGF+RI          D+ +DP D+TR+HPECY T D+A ++CA+AL+V   + DY+  VE  M  +R  L++  D                            +D R  P  + L D ++QL+L  YA ELE  G+GKR +  + I +E+R+P  D R+P  A   +E+F  LTGETD +L  G+ V   V +  D   R              ++   GL G++   Y  +D         +  NL   ++V Q +EA ++ V K R +L LS++ S
Sbjct:   68 WNAASSQETFGYELLFLPVHPLKSLLKGAQQALLNALECRLVDAVCDVGVDINKACAYDHIAPMLAFVGGLGLRKADALRQNIRKS--AKAITSRNDLLLRKLLGSCVWTNAAGFVRI---------CDNVMDPLDNTRIHPECYTTHDFATKICADALEVAHSNSDYVANVEKLMASTRRVLEKRMDKHRTWLDLWEGGQRPIHGVTEYNETVRTVDGREHPLGVELGDILSQLELDDYAVELEESGQGKRRLLFEQIKDELRFPWLDLRLPLAAVTHSEMFFLLTGETDQSLYVGMKVGGTVTEISDTSFRDENTDQYKRRQRATVQTDAGLRGYIGM-YDVEDTPEYQRFDVEKMNLADHMQVGQHIEAVVVAVKKDRLQLDLSIKPS 446          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S2A5F9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5F9_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.580e-50
Identity = 135/375 (36.00%), Postives = 194/375 (51.73%), Query Frame = 0
Query:   19 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----------VDDDYIQIVEGAMEDSREALKRCKDM------------------DPR--MPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRI-EGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLR 360
            W+    +G FG E   L +HPLQ  +P   LL+ +   L +AV++VGVD+N A   +H  G+L FVPGLGPRKAA L++  G   +GGVVPSRK LL+ ++L  +V+TN+  FLRIR   +L  +    L P DDTR+HP+ Y   +WA ++  +AL+++           +D   + +   M+DSR  ++R  D                   +PR  +P     D V +LDL  +AD +E+ G GK    L  I  E R P  D R P      ++LF  LTGETD TL  G  V  RV ++ D G RV++ EG V   GF+P   + D  + S            +VK   V+ A + +V   R  + LSL+
Sbjct:  110 WSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEVGVDVNGACTFDHMHGMLTFVPGLGPRKAAALKQ--GIDRIGGVVPSRKDLLARRLLGPVVFTNSVAFLRIRDIDRLNNQF---LFPLDDTRLHPDVYTRNNWAVKIAIDALELESLDLGDDAGDAEDLKARALRDVMQDSRNEVQRLFDATKAEWEGLYGPTFDIAGWNPREDVPAERWRDKVEELDLDTFADMIEQSGLGKWLSHLVMIKWEFRLPFEDPRKPMEPLAGDKLFRLLTGETDLTLCPGKEVTGRVFRNGDFGSRVKLLEGDVP--GFIPLRNLADTHVES---------AEDIVKAGDVITANLTEVKNDRMCVDLSLK 468          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S4R4E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4E1_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.520e-49
Identity = 136/375 (36.27%), Postives = 195/375 (52.00%), Query Frame = 0
Query:   19 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----------VDDDYIQIVEGAMEDSREALKRCKDM------------------DPR--MPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRI-EGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLR 360
            W+    +G FG E   L +HPLQ  +P   LL+ +   L +AV++VGVD+N A   +H  G+L FVPGLGPRKAA L++  G   +GGVVPSRK LL+ ++L  +V+TN+  FLRIR   +L  +    L P DDTR+HP+ Y   +WA ++  +AL+++           +D   + +   M+DSR  ++R  D                   +PR  +P     D V +LDL  +AD +E+ G GK    L  I  E R P  D R P      ++LF  LTGETD TL  G  V  RV ++ D G RV++ EG V   GF+P   + D  + S            +VKV  V+ A + +V K    + LSL+
Sbjct: 1310 WSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEVGVDVNGACTFDHMHGMLTFVPGLGPRKAAALKQ--GIDRIGGVVPSRKDLLARRLLGPVVFTNSVAFLRIRDIDRLNNQF---LFPLDDTRLHPDVYTRNNWAVKIAIDALELESLDLGDDAGDAEDLKARALRDVMQDSRNEVQRLFDATKAEWEGLYGPTFDIAGWNPREDVPAERWRDKVEELDLDTFADMIEQSGLGKWLSHLVMIKWEFRLPFEDPRKPMEPLAGDKLFRLLTGETDLTLCPGKEVTGRVFRNGDFGSRVKLLEGDVP--GFIPLRNLADTHVES---------AEDIVKVGDVITAIVTEVKKDHMCVDLSLK 1668          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S2Y3Q6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y3Q6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.480e-49
Identity = 128/374 (34.22%), Postives = 194/374 (51.87%), Query Frame = 0
Query:   19 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ-VDDDYIQIVEGAMEDSRE-------------------ALKRC-KDMDPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPY---TAPDENE-LFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSD 363
            W+    +G FG E   L +HPLQ  +P   LL+ +   L D  ++VG DIN A + +H  G+L F+PGLGPRKAA L++ +  +   G +  R+ LL  +++  +VY NA  FLRI++  +L   +D  L P D+TR+HP  Y   DWA ++  +AL+ + V    I+ +  A+ DS++                    L RC K+ DPR+  P     D V  LDL A+A+ +E +G G+     + ++ E R P  D R P    T   + E LF  +TGE+D TLR G  V  +VM + D G RV+IEG +    F+P   ++DD + S            +V   Q++ A II+V K    + +SL+  D
Sbjct:   97 WSVASDAGVFGTEMLYLNVHPLQQLLPRTMLLREYERVLCDVTAEVGTDINTACQFDHLRGLLMFIPGLGPRKAANLKQMVADST--GAIARRRDLLEQRLMGPVVYNNAVAFLRIQQSDQL---VDQHLHPLDNTRLHPAIYIQHDWAVKIAFDALERENVKSKAIKALTDAINDSQQDVERLLDLTQQEWELRYGGTLDRCRKEWDPRVNVPSSQWRDKVGDLDLEAFANAIESKGHGRWHSHFEMLLWEFRLPFADPRKPMESLTGDSQRERLFELITGESDETLRPGKEVTGKVMSNGDFGTRVKIEGDIP--AFIPLRNLSDDHVES---------AEDIVSQGQIVTAIIIEVKKDHMTVDMSLKMED 454          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A1Z5J5Z6_FISSO (Transcription elongation factor SPT6 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5Z6_FISSO)

HSP 1 Score: 184 bits (468), Expect = 5.910e-48
Identity = 122/371 (32.88%), Postives = 188/371 (50.67%), Query Frame = 0
Query:   19 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----VDDDYIQIVEGAMEDSREALKRC------------------KDMDPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSD 363
            W+    SGNFG E   L +HP Q  +P   LL+ +   L D V+++GV++N     +H  G+L FVPGLGPRKAA L   L    +GG +  R+ LL  +VL  +VY NA  FLRI    +L + +   L P D TR+HP+ Y   +WA ++  +AL+ +     +   I+ V   M+DS   + R                   K+ DPR+  P     D V +LDL  +A+ +E+ G G+    L+ I  E R P  D R P      +++FH +TGETD +LR G  +  +V+++ D G RV++EG +    F+P   ++D+ + S             V V Q++ A + +V K    + +SL+  D
Sbjct: 1183 WSVASDSGNFGTEMLYLNIHPSQQLLPRTILLRHYERALCDIVAEIGVNLNKCTALDHLKGLLTFVPGLGPRKAANLNHMLSQ--MGGAIAKRRDLLEKRVLGPVVYNNAVAFLRIEDADQLADHI---LHPLDGTRLHPDVYIRNNWASKIAFDALEREDPKTKESAAIKAVRDVMDDSHLEVDRLFKATKAEWERHYGPTFNIKEWDPRVNVPHDQWRDKVEELDLDTFANMIEQNGHGRWHTHLEMIKWEFRLPAADPRKPLEPLSGDKVFHLITGETDQSLRPGKEITGKVIRNGDFGSRVKLEGDIP--AFIPLRNLSDEHVESAD---------DFVSVGQIVTAVVTEVKKDHMTVDMSLKLED 1537          
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: B7G582_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G582_PHATC)

HSP 1 Score: 177 bits (449), Expect = 1.940e-45
Identity = 121/376 (32.18%), Postives = 188/376 (50.00%), Query Frame = 0
Query:   19 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----VDDDYIQIVEGAMEDSREALKRC------------------KDMDPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNP 368
            W+    +G FG E   L +HP+Q  +P  +LL+ +   L D  ++VG DIN A   +H  G+L FV G+GPRKAA L++ L    +G  +  R+ LL ++++  +VY N   FLRIR+  +L E+    L P DDTR+HP+ Y   +WA ++  +AL+ +     D   I+ +   ME+S   ++R                   KD DPR+  P     D V +LDL A+A+ +E    G+    L+ I  E R P  D R P      + LF  +TGE+D +LR G  V  +V+++ D G RV++EG +    F+P   ++D+                +V   Q++ A I  V K    + +SL+  D   NP
Sbjct: 1215 WSVASDAGAFGTEMLYLNIHPMQQLLPRTRLLREYERILCDVTAEVGTDINSACTFDHLRGLLVFVAGMGPRKAANLKQTLSQ--LGSALSRRRDLLENRMIGPVVYNNLVAFLRIRRVDQLVEQF---LHPLDDTRLHPDVYLRHNWAIKIAFDALEREDSKTKDAASIKALRDVMENSHHEVERLFMATKSEWEMNYGLTFNIKDWDPRVNVPKDMWRDKVEELDLEAFANMIEDTKLGRWHSHLEMIKWEFRLPYVDPRKPMEPVSSDRLFSLITGESDQSLRPGKEVTGKVVRNGDFGSRVKLEGEIP--AFIPLRNLSDE---------HVETAEDIVAAGQIVTAVITMVKKEHMTVDMSLKMEDFRKNP 1574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQN4_ECTSI2.360e-19680.65GTB1 RNA binding / hydrolase, acting on ester bond... [more]
A0A6H5L9M6_9PHAE3.390e-17970.83S1 motif domain-containing protein n=1 Tax=Ectocar... [more]
A0A836C842_9STRA1.200e-8745.01S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2XPZ0_9STRA1.770e-5136.07Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3HQM4_9STRA2.210e-5134.78Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2A5F9_9STRA2.580e-5036.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4R4E1_9STRA1.520e-4936.27Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2Y3Q6_9STRA2.480e-4934.22Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5J5Z6_FISSO5.910e-4832.88Transcription elongation factor SPT6 n=2 Tax=Fistu... [more]
B7G582_PHATC1.940e-4532.18Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 278..360
e-value: 5.9E-5
score: 32.5
NoneNo IPR availableGENE3D1.10.150.850coord: 54..137
e-value: 3.7E-15
score: 57.9
NoneNo IPR availableGENE3D2.40.50.140coord: 257..364
e-value: 1.3E-24
score: 88.1
IPR042066Spt6, Death-like domainGENE3D1.10.10.2740coord: 138..253
e-value: 8.3E-14
score: 53.8
IPR032706Transcription elongation factor Spt6, helix-hairpin-helix motifPFAMPF14635HHH_7coord: 31..134
e-value: 2.2E-22
score: 79.4
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 29..364
IPR003029S1 domainPROSITEPS50126S1coord: 280..360
score: 13.159
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 41..135
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 275..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56820contigH-elongata_contig56820:195..3754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56820.13132.1mRNA_H-elongata_contig56820.13132.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56820 195..3754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56820.13132.1 ID=prot_H-elongata_contig56820.13132.1|Name=mRNA_H-elongata_contig56820.13132.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=370bp
MVITGGKRRFLPTPFPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLL
KVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLG
TAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDP
FDDTRVHPECYNTQDWAQRVCANALDVQVDDDYIQIVEGAMEDSREALKR
CKDMDPRMPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRY
PDRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIE
GGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDK
PRFELKLSLRKSDTLPNPDK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR042066Spt6_death-like
IPR032706Spt6_HHH
IPR017072TF_Spt6
IPR003029S1_domain
IPR010994RuvA_2-like
IPR012340NA-bd_OB-fold