mRNA_H-elongata_contig56820.13132.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI) HSP 1 Score: 592 bits (1525), Expect = 2.360e-196 Identity = 300/372 (80.65%), Postives = 331/372 (88.98%), Query Frame = 1
Query: 25 RFLPTP---FPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQVDDDYIQIVEGAMEDSREALKR-CKD----MDPRMPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNPDK 1110
R+L P F GMWTTMD+SGNFGHE FSL+LH LQD+VPPQQLLKVWTHR+MDAVS VGVDINHA EHEHA GVLQFVPGLGPRKA KLRE+LGT +GGVVPSRKALLSSQVLKSLVYTNAAGFLRIR+RGKL E+++ QLDPFDDTRVHPECYNTQDWAQR+CANALDVQV+DDY IVE AM+DSREAL+R C+ +DPRMPP +LNDSVNQLDL+AYADEL+RQGEGKRA QLD IVEEIRYP DRR+PY+ P E+ELF WLTGETDATLREGVLVPVR+M+H DAGVRVR+EGG GLFGFVP DYVTDDVLP DPITGQ A+L+ VVK NQ+MEAAIIKVDK RFELKLSLRKSDT+P+PDK
Sbjct: 1138 RYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTV-LGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQVEDDYFPIVESAMDDSREALQRLCQQGESGVDPRMPPNNLNDSVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKGRFELKLSLRKSDTMPDPDK 1508
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE) HSP 1 Score: 517 bits (1332), Expect = 3.390e-179 Identity = 272/384 (70.83%), Postives = 296/384 (77.08%), Query Frame = 1
Query: 16 GKRRFLPTP---FPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQVDDDYIQIVEGAMEDSREALKRCKDMDPRMPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP----------------DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNPDK 1110
G R+L P F GMWTTMD+SGNFGHE FSL+LHPLQD+VPPQQLLKVWTHR+MDAVS VGVDINHA EHEHA G+LQFVPGLGPRKA KLRE+LGT +GGVVPSRKALLSSQVLKSLVYTNAAGFLRIR+RGKL E+++ QLDPFDDTRVHPECYNTQDWAQR+CANALDVQ VNQLDL+AYADEL+RQGEGKRA QLD IVEEIRYP DRR+PY+ P E+ELF WLTGETDATLREGVLVPVR+M+H DAGVRVR+EGG GLFGFVP DYVTDDVLP DPITGQ VVK NQ+MEAAIIKVDK RFELKLSLRKSDT+P+PDK
Sbjct: 178 GLARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHPLQDQVPPQQLLKVWTHRMMDAVSAVGVDINHAAEHEHAVGLLQFVPGLGPRKAFKLRERLGTV-LGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQ--------------------------------------VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNDEMINQMVVHVDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQG-----VVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK 517
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A836C842_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C842_9STRA) HSP 1 Score: 295 bits (756), Expect = 1.200e-87 Identity = 176/391 (45.01%), Postives = 225/391 (57.54%), Query Frame = 1
Query: 37 TPFPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQVDDDYIQIVE----------------------------GAMEDSREALKRCKDMDP----RMPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEG-GVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNP 1104
T P +SG FGHE SL+LHPLQ V QLL+ RL+DAV++VGVDIN A E EH G+LQFV GLGPRKAA LR + + +GGV+ SR+ LL ++L YTNAA FLRIRKRG+L ER D ++PFDDTR+H ECY WA+++CANALDV M+DSRE L+ D DP P L D + +LDL +A ELERQG GKR MQL+ + +EIR+P +RR P+ ++++F W+TGE DATLR G++V V H GVR +EG L GF+P D + DD LP D A+L + N + A I + KPRFE++LSLR+SDT NP
Sbjct: 281 TLLPXXXXXRGSSGEFGHEMLSLRLHPLQGEVTKGQLLRALEQRLIDAVNEVGVDINMACEKEHMRGMLQFVAGLGPRKAAALRTGISQS-LGGVINSRRQLLDRKLLGPSTYTNAASFLRIRKRGRLEERDD--INPFDDTRIHTECYIKHHWARQICANALDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIMDDSREVLRATLDRDPDWRPENPESELKDKLEELDLVEFAGELERQGLGKRRMQLEAVKDEIRFPYRERRRPFQRASDDDVFEWITGEDDATLRPGMVVTCSVSGHTRGGVRATVEGLSRALLGFIPMDKLQDDPLPPD------ADLALMFPRNSIRSAVIADIRKPRFEVQLSLRRSDTQQNP 662
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S2XPZ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPZ0_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.770e-51 Identity = 136/377 (36.07%), Postives = 196/377 (51.99%), Query Frame = 1
Query: 55 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ--------VDDDYIQI--VEGAMEDSREALKRCKDM------------------DPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSD 1089
W+ +G FG E L +HPLQ +P LL+ + L +AV++VGVDIN A ++H G+L FVPGLGPRKAA L++ + +GGVV SR+ALL ++L +VY NA FLRIR+ +L ++ L P DDTR+HP+ Y+ +WA ++ +AL++ D + I I + M+DS + +KR D DPR+ P S D V +LDL +A +E+ G GK L I E R P D R P LF LTGETD +L G V +V+++ D G R+++EG + FVP ++D+ + S V V V+ A + +V K + LSLR D
Sbjct: 54 WSVASDAGVFGTELLFLNIHPLQQLLPKPLLLRQYERVLCNAVAEVGVDINAACTYDHIHGMLSFVPGLGPRKAASLKQTI--IRIGGVVASRRALLQKRLLGPIVYNNAVAFLRIRETDQLANQL---LHPLDDTRLHPDVYHRNNWAVKIAVDALELGDGAGGEGGSDKESIAITALRDVMQDSHDQVKRLFDATKAEWEIAYGPSFNVSAWDPRVSVPTDSWRDKVEELDLETFAKMIEQSGLGKWLSHLIMIKWEFRLPFEDPRKPMEPLSGERLFRLLTGETDQSLCPGKEVTGKVVRNGDFGSRIKLEGEIP--AFVPLRNLSDENVESAD---------DFVTVGSVVTAVVTEVKKDHMCVDLSLRMED 414
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S3HQM4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQM4_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.210e-51 Identity = 136/391 (34.78%), Postives = 198/391 (50.64%), Query Frame = 1
Query: 55 WTTMDTSGNFGHETFSLKLHPLQDRVP--PQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDV-QVDDDYIQIVEGAMEDSREALKRCKD----------------------------MDPRMPP--ISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVR------------VRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKS 1086
W + FG+E L +HPL+ + Q LL RL+DAV DVGVDIN A ++H A +L FV GLG RKA LR+ + + + SR LL ++L S V+TNAAGF+RI D+ +DP D+TR+HPECY T D+A ++CA+AL+V + DY+ VE M +R L++ D +D R P + L D ++QL+L YA ELE G+GKR + + I +E+R+P D R+P A +E+F LTGETD +L G+ V V + D R ++ GL G++ Y +D + NL ++V Q +EA ++ V K R +L LS++ S
Sbjct: 68 WNAASSQETFGYELLFLPVHPLKSLLKGAQQALLNALECRLVDAVCDVGVDINKACAYDHIAPMLAFVGGLGLRKADALRQNIRKS--AKAITSRNDLLLRKLLGSCVWTNAAGFVRI---------CDNVMDPLDNTRIHPECYTTHDFATKICADALEVAHSNSDYVANVEKLMASTRRVLEKRMDKHRTWLDLWEGGQRPIHGVTEYNETVRTVDGREHPLGVELGDILSQLELDDYAVELEESGQGKRRLLFEQIKDELRFPWLDLRLPLAAVTHSEMFFLLTGETDQSLYVGMKVGGTVTEISDTSFRDENTDQYKRRQRATVQTDAGLRGYIGM-YDVEDTPEYQRFDVEKMNLADHMQVGQHIEAVVVAVKKDRLQLDLSIKPS 446
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S2A5F9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5F9_9STRA) HSP 1 Score: 187 bits (474), Expect = 2.580e-50 Identity = 135/375 (36.00%), Postives = 194/375 (51.73%), Query Frame = 1
Query: 55 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----------VDDDYIQIVEGAMEDSREALKRCKDM------------------DPR--MPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRI-EGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLR 1080
W+ +G FG E L +HPLQ +P LL+ + L +AV++VGVD+N A +H G+L FVPGLGPRKAA L++ G +GGVVPSRK LL+ ++L +V+TN+ FLRIR +L + L P DDTR+HP+ Y +WA ++ +AL+++ +D + + M+DSR ++R D +PR +P D V +LDL +AD +E+ G GK L I E R P D R P ++LF LTGETD TL G V RV ++ D G RV++ EG V GF+P + D + S +VK V+ A + +V R + LSL+
Sbjct: 110 WSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEVGVDVNGACTFDHMHGMLTFVPGLGPRKAAALKQ--GIDRIGGVVPSRKDLLARRLLGPVVFTNSVAFLRIRDIDRLNNQF---LFPLDDTRLHPDVYTRNNWAVKIAIDALELESLDLGDDAGDAEDLKARALRDVMQDSRNEVQRLFDATKAEWEGLYGPTFDIAGWNPREDVPAERWRDKVEELDLDTFADMIEQSGLGKWLSHLVMIKWEFRLPFEDPRKPMEPLAGDKLFRLLTGETDLTLCPGKEVTGRVFRNGDFGSRVKLLEGDVP--GFIPLRNLADTHVES---------AEDIVKAGDVITANLTEVKNDRMCVDLSLK 468
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S4R4E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4E1_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.520e-49 Identity = 136/375 (36.27%), Postives = 195/375 (52.00%), Query Frame = 1
Query: 55 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----------VDDDYIQIVEGAMEDSREALKRCKDM------------------DPR--MPPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRI-EGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLR 1080
W+ +G FG E L +HPLQ +P LL+ + L +AV++VGVD+N A +H G+L FVPGLGPRKAA L++ G +GGVVPSRK LL+ ++L +V+TN+ FLRIR +L + L P DDTR+HP+ Y +WA ++ +AL+++ +D + + M+DSR ++R D +PR +P D V +LDL +AD +E+ G GK L I E R P D R P ++LF LTGETD TL G V RV ++ D G RV++ EG V GF+P + D + S +VKV V+ A + +V K + LSL+
Sbjct: 1310 WSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEVGVDVNGACTFDHMHGMLTFVPGLGPRKAAALKQ--GIDRIGGVVPSRKDLLARRLLGPVVFTNSVAFLRIRDIDRLNNQF---LFPLDDTRLHPDVYTRNNWAVKIAIDALELESLDLGDDAGDAEDLKARALRDVMQDSRNEVQRLFDATKAEWEGLYGPTFDIAGWNPREDVPAERWRDKVEELDLDTFADMIEQSGLGKWLSHLVMIKWEFRLPFEDPRKPMEPLAGDKLFRLLTGETDLTLCPGKEVTGRVFRNGDFGSRVKLLEGDVP--GFIPLRNLADTHVES---------AEDIVKVGDVITAIVTEVKKDHMCVDLSLK 1668
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A7S2Y3Q6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y3Q6_9STRA) HSP 1 Score: 187 bits (476), Expect = 2.480e-49 Identity = 128/374 (34.22%), Postives = 194/374 (51.87%), Query Frame = 1
Query: 55 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ-VDDDYIQIVEGAMEDSRE-------------------ALKRC-KDMDPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPY---TAPDENE-LFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSD 1089
W+ +G FG E L +HPLQ +P LL+ + L D ++VG DIN A + +H G+L F+PGLGPRKAA L++ + + G + R+ LL +++ +VY NA FLRI++ +L +D L P D+TR+HP Y DWA ++ +AL+ + V I+ + A+ DS++ L RC K+ DPR+ P D V LDL A+A+ +E +G G+ + ++ E R P D R P T + E LF +TGE+D TLR G V +VM + D G RV+IEG + F+P ++DD + S +V Q++ A II+V K + +SL+ D
Sbjct: 97 WSVASDAGVFGTEMLYLNVHPLQQLLPRTMLLREYERVLCDVTAEVGTDINTACQFDHLRGLLMFIPGLGPRKAANLKQMVADST--GAIARRRDLLEQRLMGPVVYNNAVAFLRIQQSDQL---VDQHLHPLDNTRLHPAIYIQHDWAVKIAFDALERENVKSKAIKALTDAINDSQQDVERLLDLTQQEWELRYGGTLDRCRKEWDPRVNVPSSQWRDKVGDLDLEAFANAIESKGHGRWHSHFEMLLWEFRLPFADPRKPMESLTGDSQRERLFELITGESDETLRPGKEVTGKVMSNGDFGTRVKIEGDIP--AFIPLRNLSDDHVES---------AEDIVSQGQIVTAIIIEVKKDHMTVDMSLKMED 454
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: A0A1Z5J5Z6_FISSO (Transcription elongation factor SPT6 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5Z6_FISSO) HSP 1 Score: 184 bits (468), Expect = 5.910e-48 Identity = 122/371 (32.88%), Postives = 188/371 (50.67%), Query Frame = 1
Query: 55 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----VDDDYIQIVEGAMEDSREALKRC------------------KDMDPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSD 1089
W+ SGNFG E L +HP Q +P LL+ + L D V+++GV++N +H G+L FVPGLGPRKAA L L +GG + R+ LL +VL +VY NA FLRI +L + + L P D TR+HP+ Y +WA ++ +AL+ + + I+ V M+DS + R K+ DPR+ P D V +LDL +A+ +E+ G G+ L+ I E R P D R P +++FH +TGETD +LR G + +V+++ D G RV++EG + F+P ++D+ + S V V Q++ A + +V K + +SL+ D
Sbjct: 1183 WSVASDSGNFGTEMLYLNIHPSQQLLPRTILLRHYERALCDIVAEIGVNLNKCTALDHLKGLLTFVPGLGPRKAANLNHMLSQ--MGGAIAKRRDLLEKRVLGPVVYNNAVAFLRIEDADQLADHI---LHPLDGTRLHPDVYIRNNWASKIAFDALEREDPKTKESAAIKAVRDVMDDSHLEVDRLFKATKAEWERHYGPTFNIKEWDPRVNVPHDQWRDKVEELDLDTFANMIEQNGHGRWHTHLEMIKWEFRLPAADPRKPLEPLSGDKVFHLITGETDQSLRPGKEITGKVIRNGDFGSRVKLEGDIP--AFIPLRNLSDEHVESAD---------DFVSVGQIVTAVVTEVKKDHMTVDMSLKLED 1537
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Match: B7G582_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G582_PHATC) HSP 1 Score: 177 bits (449), Expect = 1.940e-45 Identity = 121/376 (32.18%), Postives = 188/376 (50.00%), Query Frame = 1
Query: 55 WTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLKVWTHRLMDAVSDVGVDINHAKEHEHAAGVLQFVPGLGPRKAAKLREKLGTAFVGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRKRGKLTERMDSQLDPFDDTRVHPECYNTQDWAQRVCANALDVQ----VDDDYIQIVEGAMEDSREALKRC------------------KDMDPRM--PPISLNDSVNQLDLSAYADELERQGEGKRAMQLDGIVEEIRYP--DRRIPYTAPDENELFHWLTGETDATLREGVLVPVRVMKHMDAGVRVRIEGGVGLFGFVPADYVTDDVLPSDPITGQAANLRHVVKVNQVMEAAIIKVDKPRFELKLSLRKSDTLPNP 1104
W+ +G FG E L +HP+Q +P +LL+ + L D ++VG DIN A +H G+L FV G+GPRKAA L++ L +G + R+ LL ++++ +VY N FLRIR+ +L E+ L P DDTR+HP+ Y +WA ++ +AL+ + D I+ + ME+S ++R KD DPR+ P D V +LDL A+A+ +E G+ L+ I E R P D R P + LF +TGE+D +LR G V +V+++ D G RV++EG + F+P ++D+ +V Q++ A I V K + +SL+ D NP
Sbjct: 1215 WSVASDAGAFGTEMLYLNIHPMQQLLPRTRLLREYERILCDVTAEVGTDINSACTFDHLRGLLVFVAGMGPRKAANLKQTLSQ--LGSALSRRRDLLENRMIGPVVYNNLVAFLRIRRVDQLVEQF---LHPLDDTRLHPDVYLRHNWAIKIAFDALEREDSKTKDAASIKALRDVMENSHHEVERLFMATKSEWEMNYGLTFNIKDWDPRVNVPKDMWRDKVEELDLEAFANMIEDTKLGRWHSHLEMIKWEFRLPYVDPRKPMEPVSSDRLFSLITGESDQSLRPGKEVTGKVVRNGDFGSRVKLEGEIP--AFIPLRNLSDE---------HVETAEDIVAAGQIVTAVITMVKKEHMTVDMSLKMEDFRKNP 1574 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56820.13132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56820.13132.1 >prot_H-elongata_contig56820.13132.1 ID=prot_H-elongata_contig56820.13132.1|Name=mRNA_H-elongata_contig56820.13132.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=370bp MVITGGKRRFLPTPFPGMWTTMDTSGNFGHETFSLKLHPLQDRVPPQQLLback to top mRNA from alignment at H-elongata_contig56820:195..3754+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56820.13132.1 ID=mRNA_H-elongata_contig56820.13132.1|Name=mRNA_H-elongata_contig56820.13132.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3560bp|location=Sequence derived from alignment at H-elongata_contig56820:195..3754+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56820:195..3754+ >mRNA_H-elongata_contig56820.13132.1 ID=mRNA_H-elongata_contig56820.13132.1|Name=mRNA_H-elongata_contig56820.13132.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2220bp|location=Sequence derived from alignment at H-elongata_contig56820:195..3754+ (Himanthalia elongata Himel1 dioecious)back to top |