prot_H-elongata_contig55750.13004.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55750.13004.1
Unique Nameprot_H-elongata_contig55750.13004.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length307
Homology
BLAST of mRNA_H-elongata_contig55750.13004.1 vs. uniprot
Match: D8LDZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ5_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 2.550e-100
Identity = 181/306 (59.15%), Postives = 205/306 (66.99%), Query Frame = 0
Query:    1 FDASRYSGLDDNSSACVFASEVSVLLEKERVAQGE-PVSFSFSLILPEKLTPTFRGVGVRYAYAVTVRVKRALPXXXXXXXXXXXXXXXXXXXXXXG-GFSTTDLHVAFTVLSEGQAAAAAAIHGVETVGGEGGWDSVAFAEIEIERLSRETFELEAEKARAGGLISGTRAVTWNMQGRMLDDGAGIVATSALXXXXXXXXXXXXXXXXXXXXXXXXMVFSIRSGDHHIASFVLHKPEFCAGDIVLGNFDFSSASVRCLQVCACLEISEEN--AFVGVFSPSTPGRRKSSGGGKPPCHKRVVDSFK 302
            F   RYSGL D+ SACVFASEV+VLL+KERV  G  P SF FS +LPE LTPTFRGVGVRYAYAVTVRV+RALP                        GFSTTD+HV+FTVLS G  A        + +G  GGW  VAFAE+E ER S + FE+EA++A+AGGL+SGTRAVTWNMQGRM+DDG G +  SAL           XXXXX        MV+SIRSGDH I SF+LHK EFCAGDIVLGNFDFS AS RCLQVCACLE+ EEN  AF G  + S PG+ K S   +  CHKRVVDS K
Sbjct:  117 FPVPRYSGLTDDRSACVFASEVAVLLKKERVDGGRHPASFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRRALPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHVSFTVLSRGPPAFDGVGGTADGIGDGGGWGRVAFAELEAERQSADAFEVEADRAKAGGLVSGTRAVTWNMQGRMIDDGFGSIGASALLLGEGDGGAEDXXXXX--------MVYSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAFTGDSASSAPGKPKPSPNARNTCHKRVVDSCK 414          
BLAST of mRNA_H-elongata_contig55750.13004.1 vs. uniprot
Match: A0A6H5KF53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF53_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.440e-44
Identity = 94/177 (53.11%), Postives = 113/177 (63.84%), Query Frame = 0
Query:    1 FDASRYSGLDDNSSACVFASEVSVLLEKERVAQGE-PVSFSFSLILPEKLTPTFRGVGVRYAYAVTVRVKRALPXXXXXXXXXXXXXXXXXXXXXXG-GFSTTDLHVAFTVLSEGQAAAAAAIHGVETVGGEGGWDSVAFAEIEIERLSRETFELEAEKARAGGLISGTRAVTWNMQ 175
            F   RYSGL D+ SACVFASEV+VLL++ERV  G  P SF FS +LPE LTPTFRGVGVRYAYAVTVRV+R+LP                        GFSTTD+HV+FT  ++G             +G    W  VAF E+E ER S + FE+EA++A+ GGL+SGTRAVTWNMQ
Sbjct:  114 FPIPRYSGLTDDRSACVFASEVAVLLKQERVDGGRHPTSFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRRSLPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHVSFTGTADG-------------IGDGVSWGRVAFTELEAERQSGDAFEMEADRAKGGGLVSGTRAVTWNMQ 277          
BLAST of mRNA_H-elongata_contig55750.13004.1 vs. uniprot
Match: A0A6H5L4W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4W5_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.020e-34
Identity = 84/146 (57.53%), Postives = 92/146 (63.01%), Query Frame = 0
Query:  159 RAGGLISGTRAVTWNMQGRMLDDGAGIVATSALXXXXXXXXXXXXXXXXXXXXXXXXMVFSIRSGDHHIASFVLHKPEFCAGDIVLGNFDFSSASVRCLQVCACLEISEEN--AFVGVFSPSTPGRRKSSGGGKPPCHKRVVDSFK 302
            RAG   S  R     ++GRM+DDG G +  SAL          XXXXXX        MVFSIRSGDH I SF+LHK EFCAGDIVLGNFDFS AS RCLQVCACLE+ EEN  AF G  + S PGR K     +  CHKRVVDS K
Sbjct:   13 RAGAGRSPPRHDIRKIKGRMIDDGFGSMGASALLLGEGDGGAGXXXXXX--------MVFSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAFPGDAASSAPGRPKPPPDVRSTCHKRVVDSCK 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55750.13004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDZ5_ECTSI2.550e-10059.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF53_9PHAE1.440e-4453.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4W5_9PHAE2.020e-3457.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..156
IPR014848Reduced growth phenotype protein 1PANTHERPTHR12507REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATEDcoord: 17..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55750contigH-elongata_contig55750:877..3541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55750.13004.1mRNA_H-elongata_contig55750.13004.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55750 877..3541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55750.13004.1 ID=prot_H-elongata_contig55750.13004.1|Name=mRNA_H-elongata_contig55750.13004.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=307bp
FDASRYSGLDDNSSACVFASEVSVLLEKERVAQGEPVSFSFSLILPEKLT
PTFRGVGVRYAYAVTVRVKRALPPPPPSSTGLLGLMRRRPPPSASGGFST
TDLHVAFTVLSEGQAAAAAAIHGVETVGGEGGWDSVAFAEIEIERLSRET
FELEAEKARAGGLISGTRAVTWNMQGRMLDDGAGIVATSALLGGGGGPGD
LEEEEYGILPPPPPPMVFSIRSGDHHIASFVLHKPEFCAGDIVLGNFDFS
SASVRCLQVCACLEISEENAFVGVFSPSTPGRRKSSGGGKPPCHKRVVDS
FKVCNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014848Rgp1